Click here to switch to the map view.

The map label for this gene is yhbH [C]

Identifier: 21243700

GI number: 21243700

Start: 3475763

End: 3476080

Strand: Direct

Name: yhbH [C]

Synonym: XAC2973

Alternate gene names: 21243700

Gene position: 3475763-3476080 (Clockwise)

Preceding gene: 21243699

Following gene: 21243701

Centisome position: 67.16

GC content: 62.89

Gene sequence:

>318_bases
ATGCGTATCGAGACGTATGGCCACCAGCTTGAAGTGACCCCCGCCCTGCGGGAGTACGTGGCAAGCAAGCTGCAGCGACT
GCAGCGCCATTTCGACCAGCACTGCGAAGTCCGAACGCAGCTGGCCGTCCGCAAGCCGGACCACCACGTGGTCGCCACCG
TCAACCTTCCCGGTCGCACCCTGCACGCAGATGCCAGCGGTTCCACCATGTATGCGGCCATCGACCTGCTGGTCGACAAG
CTCGACCGCCTGGTCCTCAAGCACAAAGAGAAGAAATGTAACCACCACGCCCGCGAGGTGCGCGACAATCCCGCATGA

Upstream 100 bases:

>100_bases
GCGCATCGCCTGACGTTGCAACCACCGCAACGCCGGCCTGCGCCGGGTTTGTCGGATCCCCGGAACGGTTCATTGGCCCA
CCGACCAATGGAGGTATCCG

Downstream 100 bases:

>100_bases
CGCTTCCCGCCTGATGCCCCCATGCCTTTAACCGATCTGATGGCGGCCGTGCGCACCCTGGTGTCGCCGGCCGCCGATCG
CGACACCGTCCTGCATGCCG

Product: sigma-54 modulation protein

Products: NA

Alternate protein names: ORF107 [H]

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MRIETYGHQLEVTPALREYVASKLQRLQRHFDQHCEVRTQLAVRKPDHHVVATVNLPGRTLHADASGSTMYAAIDLLVDK
LDRLVLKHKEKKCNHHAREVRDNPA

Sequences:

>Translated_105_residues
MRIETYGHQLEVTPALREYVASKLQRLQRHFDQHCEVRTQLAVRKPDHHVVATVNLPGRTLHADASGSTMYAAIDLLVDK
LDRLVLKHKEKKCNHHAREVRDNPA
>Mature_105_residues
MRIETYGHQLEVTPALREYVASKLQRLQRHFDQHCEVRTQLAVRKPDHHVVATVNLPGRTLHADASGSTMYAAIDLLVDK
LDRLVLKHKEKKCNHHAREVRDNPA

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=95, Percent_Identity=43.1578947368421, Blast_Score=81, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 12094; Mature: 12094

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIETYGHQLEVTPALREYVASKLQRLQRHFDQHCEVRTQLAVRKPDHHVVATVNLPGRT
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCE
LHADASGSTMYAAIDLLVDKLDRLVLKHKEKKCNHHAREVRDNPA
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRIETYGHQLEVTPALREYVASKLQRLQRHFDQHCEVRTQLAVRKPDHHVVATVNLPGRT
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCE
LHADASGSTMYAAIDLLVDKLDRLVLKHKEKKCNHHAREVRDNPA
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2695747; 3481423 [H]