| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243636
Identifier: 21243636
GI number: 21243636
Start: 3415957
End: 3417312
Strand: Reverse
Name: 21243636
Synonym: XAC2909
Alternate gene names: NA
Gene position: 3417312-3415957 (Counterclockwise)
Preceding gene: 21243637
Following gene: 21243635
Centisome position: 66.03
GC content: 63.94
Gene sequence:
>1356_bases ATGAGCGCTTTCGACAAACATCAGATGTCCACCTTCCGTTTCGTGCGTTGCGCACTCGACGTGCAGACCGGCGTGGCGAC GCTGGTGTATGCCTTCGATCAAGGGCCGGAGCTGGTCGAGACCGTTGCGGTGCCGGGCGCACCGTTCGTCCTGGAGGGCG CGCAGGCGACTGCCGTGCAACAGGCGCTGCGGCTGCTGCATCTCATTGCAGGAGTCAGTTATTTCAAAGCTGCGGTGCCG CCGAACATCGCCATCGACAGCTACAGCATCGATGCCGAAACCGCTGCGCTGGTGGAAAGCGTGTACCTGCACGGCCTGGG CGAATTTGCCTATCGCAATGGATTGAATCTGCATGGCAAGATTCATTTTCCGGTCGCCGCGCAAGCGTCTGATGCTGCGC CGGCAGTGGGGTTGCGCGAGCATGCGCTGGTTGCGATCGGTGGCGGTAAGGATTCGCTGGTCAGCATCGAGGCCCTGCGC CAGGCCGGCGTGGCGCAGACCGTCAGCTGGATCGGCGGTTCGCAACTCATCCGTGCCTGTGCAGAACGCACCGGGTTGCC GGTACTCAACATCGGCCGCGTGCTGGCCCCGGAACTGTTCGAACTCAATCGCCAGGGCGCGTGGAACGGGCATATCCCGG TGACCGCGGTGAACTCGGCCATCCTGGTGCTGGCGGCGCTGCTCAATGGGATCGACCAGGTGGTGTTCTCCAACGAACGT TCGGCCAGTTACGGCAGCCAGATTCCCGGCACCGGCGAGGTCAATCACCAGTGGTCCAAGGGCTGGGCGTTCGAACAGGC ATTCGGCGATTACGTGCAGCGGCAGGTGGCGGCCGATCTGCGCTACTACTCGTTGCTGCGGCCGCTCTCCGAGTTGGCGG TGGCGCGGCAATTCGCCAAGACAGATCACTACGACGCGCACTTTTCCAGCTGCAACCGCAACTTCCACATCATGGGCGAG CGCCCGGTGCATCGCTGGTGCGGCGTGTGCCCGAAGTGCCATTTCGTGTTCCTGGCGCTGGCGCCGTTCATGCCCAAGAC GCGGTTGGTCAACATCTTCGGGCGCAATCTGCTCGACGATGCGACCCAGGCCGGCGGCTACGATGCGCTGCTGGAGTTCC AGGACCACAAGCCGTTCGAATGCGTGGGCGAAGGCCGCGAATCGCGCGCGGCGATGGCCGTGCTGGCCAGCCGCGCGGAG TGGAAGGAGGACGCGTTGGTGAAGCGCTTCATCCGCGACATCCAGCCGCACCTCGACTCGAATGATCTGCAGGTCCAGCC ACTCATGGCCATCGATGGCGAGCACCGGATTCCGCCGGCGCTGTGGGAGCGCGTGCGTGCGAATTTCGCAGCTTGA
Upstream 100 bases:
>100_bases GTTGCCTGCCGCTGCTATGGGCGGCGGTGCCGTTTTCCATGATTGAATATCTCCTGTGCCGACGCTATCTGCGTCGTGTA CGTGTTTCTGCAGGTAGTCC
Downstream 100 bases:
>100_bases AGGCAAGGCTGTTGCGTTGTGGGGCTGGGGGCGCGAAGGACGTGCGGCGTATCGTGCGCTGCGGGCGCGCCTGCCGACTC AAGCGCTGACGGTGTTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MSAFDKHQMSTFRFVRCALDVQTGVATLVYAFDQGPELVETVAVPGAPFVLEGAQATAVQQALRLLHLIAGVSYFKAAVP PNIAIDSYSIDAETAALVESVYLHGLGEFAYRNGLNLHGKIHFPVAAQASDAAPAVGLREHALVAIGGGKDSLVSIEALR QAGVAQTVSWIGGSQLIRACAERTGLPVLNIGRVLAPELFELNRQGAWNGHIPVTAVNSAILVLAALLNGIDQVVFSNER SASYGSQIPGTGEVNHQWSKGWAFEQAFGDYVQRQVAADLRYYSLLRPLSELAVARQFAKTDHYDAHFSSCNRNFHIMGE RPVHRWCGVCPKCHFVFLALAPFMPKTRLVNIFGRNLLDDATQAGGYDALLEFQDHKPFECVGEGRESRAAMAVLASRAE WKEDALVKRFIRDIQPHLDSNDLQVQPLMAIDGEHRIPPALWERVRANFAA
Sequences:
>Translated_451_residues MSAFDKHQMSTFRFVRCALDVQTGVATLVYAFDQGPELVETVAVPGAPFVLEGAQATAVQQALRLLHLIAGVSYFKAAVP PNIAIDSYSIDAETAALVESVYLHGLGEFAYRNGLNLHGKIHFPVAAQASDAAPAVGLREHALVAIGGGKDSLVSIEALR QAGVAQTVSWIGGSQLIRACAERTGLPVLNIGRVLAPELFELNRQGAWNGHIPVTAVNSAILVLAALLNGIDQVVFSNER SASYGSQIPGTGEVNHQWSKGWAFEQAFGDYVQRQVAADLRYYSLLRPLSELAVARQFAKTDHYDAHFSSCNRNFHIMGE RPVHRWCGVCPKCHFVFLALAPFMPKTRLVNIFGRNLLDDATQAGGYDALLEFQDHKPFECVGEGRESRAAMAVLASRAE WKEDALVKRFIRDIQPHLDSNDLQVQPLMAIDGEHRIPPALWERVRANFAA >Mature_450_residues SAFDKHQMSTFRFVRCALDVQTGVATLVYAFDQGPELVETVAVPGAPFVLEGAQATAVQQALRLLHLIAGVSYFKAAVPP NIAIDSYSIDAETAALVESVYLHGLGEFAYRNGLNLHGKIHFPVAAQASDAAPAVGLREHALVAIGGGKDSLVSIEALRQ AGVAQTVSWIGGSQLIRACAERTGLPVLNIGRVLAPELFELNRQGAWNGHIPVTAVNSAILVLAALLNGIDQVVFSNERS ASYGSQIPGTGEVNHQWSKGWAFEQAFGDYVQRQVAADLRYYSLLRPLSELAVARQFAKTDHYDAHFSSCNRNFHIMGER PVHRWCGVCPKCHFVFLALAPFMPKTRLVNIFGRNLLDDATQAGGYDALLEFQDHKPFECVGEGRESRAAMAVLASRAEW KEDALVKRFIRDIQPHLDSNDLQVQPLMAIDGEHRIPPALWERVRANFAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49289; Mature: 49157
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAFDKHQMSTFRFVRCALDVQTGVATLVYAFDQGPELVETVAVPGAPFVLEGAQATAVQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCHHHHHH QALRLLHLIAGVSYFKAAVPPNIAIDSYSIDAETAALVESVYLHGLGEFAYRNGLNLHGK HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEE IHFPVAAQASDAAPAVGLREHALVAIGGGKDSLVSIEALRQAGVAQTVSWIGGSQLIRAC EEECEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHCCHHHHHHHH AERTGLPVLNIGRVLAPELFELNRQGAWNGHIPVTAVNSAILVLAALLNGIDQVVFSNER HHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC SASYGSQIPGTGEVNHQWSKGWAFEQAFGDYVQRQVAADLRYYSLLRPLSELAVARQFAK CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDHYDAHFSSCNRNFHIMGERPVHRWCGVCPKCHFVFLALAPFMPKTRLVNIFGRNLLDD CCCCCHHHHHCCCCEEEECCCCHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ATQAGGYDALLEFQDHKPFECVGEGRESRAAMAVLASRAEWKEDALVKRFIRDIQPHLDS HHHCCCCHHEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NDLQVQPLMAIDGEHRIPPALWERVRANFAA CCCEEEEEEEECCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure SAFDKHQMSTFRFVRCALDVQTGVATLVYAFDQGPELVETVAVPGAPFVLEGAQATAVQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCHHHHHH QALRLLHLIAGVSYFKAAVPPNIAIDSYSIDAETAALVESVYLHGLGEFAYRNGLNLHGK HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEE IHFPVAAQASDAAPAVGLREHALVAIGGGKDSLVSIEALRQAGVAQTVSWIGGSQLIRAC EEECEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHCCHHHHHHHH AERTGLPVLNIGRVLAPELFELNRQGAWNGHIPVTAVNSAILVLAALLNGIDQVVFSNER HHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC SASYGSQIPGTGEVNHQWSKGWAFEQAFGDYVQRQVAADLRYYSLLRPLSELAVARQFAK CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDHYDAHFSSCNRNFHIMGERPVHRWCGVCPKCHFVFLALAPFMPKTRLVNIFGRNLLDD CCCCCHHHHHCCCCEEEECCCCHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ATQAGGYDALLEFQDHKPFECVGEGRESRAAMAVLASRAEWKEDALVKRFIRDIQPHLDS HHHCCCCHHEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NDLQVQPLMAIDGEHRIPPALWERVRANFAA CCCEEEEEEEECCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA