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The map label for this gene is 21243626

Identifier: 21243626

GI number: 21243626

Start: 3402660

End: 3403940

Strand: Reverse

Name: 21243626

Synonym: XAC2899

Alternate gene names: NA

Gene position: 3403940-3402660 (Counterclockwise)

Preceding gene: 21243627

Following gene: 21243625

Centisome position: 65.77

GC content: 59.41

Gene sequence:

>1281_bases
ATGACCCCCGCCCTTTACCACAAGGCGTTCAAGTCATCTGGCGCGCCGTGGCTTGGGAATGTGCCCACCCATTGGGTGGT
GAAACCTCTGTGGTCCATGTACAGGCAGAAGAAGATTACGGGATACCCCGAGGAGACGCTCCTCTCTGTCTATCGTGACC
ATGGTGTCATTGAAAAGAGCTCGCGGGACGACAACAAAAATCGTGCGTCAGAAGATCTGAGCGGCTACCAGCTAGTCGTG
GATGGCGACCTAGTCACGAACAAAATGAAGACGTGGCAAGGATCGATTGCCGTCTCAAGCCTGCGCGGCATTGTGAGCCC
CGCATACTACGTCTACACAAAGCTTCATGACGGCAATAACGCCTACCTCCACCACCTGTTGCGGAGCGTTCCATACATCA
CTGGCTACCAGTCGATCTCAAAGGGGATCCGTGTGGGCCAGTGGGATCTTGAGGCAGATAAATTTCGCCTGTTCCCCGTA
CTCATTCCACCTCGGCCGGAACAGGACGCCATCGTCGCCCACCTCGACCGCGCAACCACCCGTATCGACGCCCTGGTCGC
CAAGAAGACCCACTTCATCGAGCTGCTGCGCGAGAAGCGCCAGGCCATGATTACGCATGCCGTGACCAAGGGGCTGGATC
GTGGTGCGCCGATGAAGGACAGCGGGGTTGAGTGGCTGGGGGAGGTCCCCGTGACGTGGGATACCGCACCACTCAAGTCG
TTCCTTCAGCTTCGTCGGGACATCGTTGGTACCGCCAGCGCGAATACCAGGCTGCTTTCGCTCACCTTGCAGGGCGTGAT
TGAGCGAGACCTGGAAAATCCCACCGGCAAGATGCCTGCTTCATTCGATGGCTACCAGCGCATTTCCGCAGGCGAGATGG
TCTTCTGCCTGTTCGACATGGACGAAACGCCGAGGACCGTCGGCGTGGCCCAACAGGACGGGATGCTGACGGGCGCGTAT
ACGGTTTTCCGGCCACAGAGCGACCTCTGGGCGCGCTACCTCTACTACTTCTTTCTCCACGTGGACGAGTACAAGCGCCT
TAAGCCCTTCTACAAGGGCCTGCGCAAGACCATTCGACCTGGCCCGTTTCTCTCCATTCAGGTACCGCGCCCCAGGGATG
GTGAAGCTGAGGCCATCGTCGCCCATCTCGACCGCGCTACCTCCCGCATTGACACTCTGATCGCCAAGACCGAACGCTCG
ATCGAACTGCTCCGCGAACACCGCACCGCCCTCATTACCGCTGCCGTCACCGGCAAGATCGACCTGCGCCCTGCGGCCTA
A

Upstream 100 bases:

>100_bases
ACTTCTACAAATACGTTCCGCCGCGTGACCTGCACGAAATCGACTCAGAGTTGAAGGCCGTTGAGGCTGAAATCGCCGCA
CTGCTGGATGAGGTGGCGGA

Downstream 100 bases:

>100_bases
GGACACGCCATGCATCCTGCCTTCACCGACACCGCCCACCGCGAGAAATACTTCGAGACGTACATCGTCAAGCAACTCGC
CGCGCGCGGCTGGAAGATAG

Product: type I restriction-modification system specificity determinant

Products: NA

Alternate protein names: Restriction System DNA Specificity Domain Protein; Type I Restriction- System S Subunit; Type I Restriction- System Specificity Determinant; Type I Restriction- System Specificity Subunit; Restriction Endonuclease S Subunit; Type I Restriction S Subunit; Type I Restriction- System; Type I Site-Specific Restriction- System S Subunit; Type I Restriction-; Type I Restriction DNA Specificity Protein; Type I Restriction DNA Specificity Domain Protein; Type I Restriction Specificity Protein; Restriction System DNA Specificity Domain; Type I Restriction- Subunit S; Type I Restriction- System Specifity Subunit; Restriction Endonuclease S Subunits-Like; Type I Restriction System DNA Specificity Domain Protein; Type I Restriction Endonuclease S Subunit; Type I DNA Specificity S Subunit; Type I Restriction- Methylase S Subunit; Type I Restriction-Mod; Type I Restriction System Specificity Protein HsdS; Type I Restriction- System Subunit S; Restriction System Specificity Subunit; Type I Restriction- System Specificity Subunit S; Type I Restriction; N-6 DNA Methylase; Restriction Endonuclease S Subunits-Like Protein; Type 1 Restriction- System Endonuclease Subunit; Type I Site-Specific Deoxyribonuclease; Restriction Endonuclease S Subunits

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MTPALYHKAFKSSGAPWLGNVPTHWVVKPLWSMYRQKKITGYPEETLLSVYRDHGVIEKSSRDDNKNRASEDLSGYQLVV
DGDLVTNKMKTWQGSIAVSSLRGIVSPAYYVYTKLHDGNNAYLHHLLRSVPYITGYQSISKGIRVGQWDLEADKFRLFPV
LIPPRPEQDAIVAHLDRATTRIDALVAKKTHFIELLREKRQAMITHAVTKGLDRGAPMKDSGVEWLGEVPVTWDTAPLKS
FLQLRRDIVGTASANTRLLSLTLQGVIERDLENPTGKMPASFDGYQRISAGEMVFCLFDMDETPRTVGVAQQDGMLTGAY
TVFRPQSDLWARYLYYFFLHVDEYKRLKPFYKGLRKTIRPGPFLSIQVPRPRDGEAEAIVAHLDRATSRIDTLIAKTERS
IELLREHRTALITAAVTGKIDLRPAA

Sequences:

>Translated_426_residues
MTPALYHKAFKSSGAPWLGNVPTHWVVKPLWSMYRQKKITGYPEETLLSVYRDHGVIEKSSRDDNKNRASEDLSGYQLVV
DGDLVTNKMKTWQGSIAVSSLRGIVSPAYYVYTKLHDGNNAYLHHLLRSVPYITGYQSISKGIRVGQWDLEADKFRLFPV
LIPPRPEQDAIVAHLDRATTRIDALVAKKTHFIELLREKRQAMITHAVTKGLDRGAPMKDSGVEWLGEVPVTWDTAPLKS
FLQLRRDIVGTASANTRLLSLTLQGVIERDLENPTGKMPASFDGYQRISAGEMVFCLFDMDETPRTVGVAQQDGMLTGAY
TVFRPQSDLWARYLYYFFLHVDEYKRLKPFYKGLRKTIRPGPFLSIQVPRPRDGEAEAIVAHLDRATSRIDTLIAKTERS
IELLREHRTALITAAVTGKIDLRPAA
>Mature_425_residues
TPALYHKAFKSSGAPWLGNVPTHWVVKPLWSMYRQKKITGYPEETLLSVYRDHGVIEKSSRDDNKNRASEDLSGYQLVVD
GDLVTNKMKTWQGSIAVSSLRGIVSPAYYVYTKLHDGNNAYLHHLLRSVPYITGYQSISKGIRVGQWDLEADKFRLFPVL
IPPRPEQDAIVAHLDRATTRIDALVAKKTHFIELLREKRQAMITHAVTKGLDRGAPMKDSGVEWLGEVPVTWDTAPLKSF
LQLRRDIVGTASANTRLLSLTLQGVIERDLENPTGKMPASFDGYQRISAGEMVFCLFDMDETPRTVGVAQQDGMLTGAYT
VFRPQSDLWARYLYYFFLHVDEYKRLKPFYKGLRKTIRPGPFLSIQVPRPRDGEAEAIVAHLDRATSRIDTLIAKTERSI
ELLREHRTALITAAVTGKIDLRPAA

Specific function: Unknown

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48154; Mature: 48023

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPALYHKAFKSSGAPWLGNVPTHWVVKPLWSMYRQKKITGYPEETLLSVYRDHGVIEKS
CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEECC
SRDDNKNRASEDLSGYQLVVDGDLVTNKMKTWQGSIAVSSLRGIVSPAYYVYTKLHDGNN
CCCCCHHHHHHCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEEECCCH
AYLHHLLRSVPYITGYQSISKGIRVGQWDLEADKFRLFPVLIPPRPEQDAIVAHLDRATT
HHHHHHHHHCCCCCCHHHHHCCCEECEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHH
RIDALVAKKTHFIELLREKRQAMITHAVTKGLDRGAPMKDSGVEWLGEVPVTWDTAPLKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEECHHHHHH
FLQLRRDIVGTASANTRLLSLTLQGVIERDLENPTGKMPASFDGYQRISAGEMVFCLFDM
HHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCEEEEEECC
DETPRTVGVAQQDGMLTGAYTVFRPQSDLWARYLYYFFLHVDEYKRLKPFYKGLRKTIRP
CCCCCEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GPFLSIQVPRPRDGEAEAIVAHLDRATSRIDTLIAKTERSIELLREHRTALITAAVTGKI
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECEE
DLRPAA
EECCCC
>Mature Secondary Structure 
TPALYHKAFKSSGAPWLGNVPTHWVVKPLWSMYRQKKITGYPEETLLSVYRDHGVIEKS
CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEECC
SRDDNKNRASEDLSGYQLVVDGDLVTNKMKTWQGSIAVSSLRGIVSPAYYVYTKLHDGNN
CCCCCHHHHHHCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEEECCCH
AYLHHLLRSVPYITGYQSISKGIRVGQWDLEADKFRLFPVLIPPRPEQDAIVAHLDRATT
HHHHHHHHHCCCCCCHHHHHCCCEECEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHH
RIDALVAKKTHFIELLREKRQAMITHAVTKGLDRGAPMKDSGVEWLGEVPVTWDTAPLKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEECHHHHHH
FLQLRRDIVGTASANTRLLSLTLQGVIERDLENPTGKMPASFDGYQRISAGEMVFCLFDM
HHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCEEEEEECC
DETPRTVGVAQQDGMLTGAYTVFRPQSDLWARYLYYFFLHVDEYKRLKPFYKGLRKTIRP
CCCCCEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GPFLSIQVPRPRDGEAEAIVAHLDRATSRIDTLIAKTERSIELLREHRTALITAAVTGKI
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECEE
DLRPAA
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA