| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243613
Identifier: 21243613
GI number: 21243613
Start: 3386396
End: 3387646
Strand: Reverse
Name: 21243613
Synonym: XAC2886
Alternate gene names: NA
Gene position: 3387646-3386396 (Counterclockwise)
Preceding gene: 21243614
Following gene: 21243610
Centisome position: 65.45
GC content: 65.47
Gene sequence:
>1251_bases GTGAATGCTGCCGGTGCTGCGCTGATTCAAAACGATATTGTCGTGTTCGGCCTGATCGCCGCCACCCTGGGCGCGGTGTT CTGGACAGCCGCGCGCGAACAAGGGTTCTGGCGGCGTTTCTACGCGTTGGTGCCGGCCTTGTTGCTGTGTTATTTGCTGC CAGGCATCTACAACACGGCCGGTTTGATCGACGGTGCCGGCACACGGTTGTACGACCCGATCGCCCGTGACGTGCTGCTG CCTGCCGCGTTGATCCTGCTGACCCTGAGCATCGACCTGCGCGCGATCCTGCGGCTCGGCCCCAAGCTGGTCGCGATGTA TCTGGCCGCATCGCTGAGCATCATGCTGGGTGCGGTGGTGGCGTTCTGGGTGATGCGCTGGCTGCATCCGGCCACCGTGG CCGGCGATACCTGGGCCGGCATGGCAGCGCTGGCGGGCAGCTGGATCGGCGGCGGCGCCAACATGCTGGCGATGCGCGAA GTGTTCGATGTGGACGCAACCACGTTCGGGCAGTTCGCGGTGGTCGATGTCGGCGTGGGCTATGTGTGGATGGCGACGCT GATCTTCCTGGCCGGCCGCGCGCGCAAGATCGATGCACGCAGCGGTGCCGACACCCGGGCGCTGGATGCCTTGCGCGAGC GCATGGCGCGCTTCCAGGCCGAGCATGCGCGCATTCCCAGCTTGGCCGACCTGATGGTGATCGTGGCGGTGGCGTTCGGC GGTGTCGGCCTTGCGCATGCCCTGGCCAATCCTCTCGCCGCGTGGTGCAAGGCGCAGTTGCATTGGGCCAGCCAGTTCAG TCTGGACACGCCGTTCGTGTGGGTGGTGGTGCTGGCGACCAGCCTGGGCCTGCTGCTGAGCTTCACCCGCGCACGCACGC TGGAGGGCGCAGGCGCGTCCAAAATCGGCACCTTGCTGCTGTATTTCCTGATCGCCTGCATCGGCATGCAGATGGACCTG CTGGCGCTGCTGGACCGGCCATGGTTGTTGCTGCTTGGCCTGATCTGGATTGCCGTGCACATTGCCGTGTTATGGGGTTT TGGCCGGTTGTTGCGGGTGCCGTTCTTCTACTTTGCGATCGGCTCGCAATCCAATATCGGCGGCCCAGCCTCCGCGCCGG TGGTTGCCTCGGCGTTTCACCCGGCACTGGCGCCGGTGGGTGTGTTGCTGGGCACGATGGGCTACGCCACCGGCACCTAT CTGGCATATCTGGTCGGCATCACTTTGCGGGCGATGGCGGGCGCTGGATAA
Upstream 100 bases:
>100_bases GCCGGGTTTGCGCAGACGTCCGGGTCGGCTAGATTCGAGGCATCGGCCACCTTGGTCCGGTCCGCGCTCTGGCGGCTACT TTCCTGGATATCCGCCTGTC
Downstream 100 bases:
>100_bases TGCGCGCCGCGATCTGCAGCGCCACGATTAAGCGACTGGGTGCGGTATCTCGCTGCGTGCAATCGCCAGCGCGGCTGGGC GATGTTGGGCGATGCTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MNAAGAALIQNDIVVFGLIAATLGAVFWTAAREQGFWRRFYALVPALLLCYLLPGIYNTAGLIDGAGTRLYDPIARDVLL PAALILLTLSIDLRAILRLGPKLVAMYLAASLSIMLGAVVAFWVMRWLHPATVAGDTWAGMAALAGSWIGGGANMLAMRE VFDVDATTFGQFAVVDVGVGYVWMATLIFLAGRARKIDARSGADTRALDALRERMARFQAEHARIPSLADLMVIVAVAFG GVGLAHALANPLAAWCKAQLHWASQFSLDTPFVWVVVLATSLGLLLSFTRARTLEGAGASKIGTLLLYFLIACIGMQMDL LALLDRPWLLLLGLIWIAVHIAVLWGFGRLLRVPFFYFAIGSQSNIGGPASAPVVASAFHPALAPVGVLLGTMGYATGTY LAYLVGITLRAMAGAG
Sequences:
>Translated_416_residues MNAAGAALIQNDIVVFGLIAATLGAVFWTAAREQGFWRRFYALVPALLLCYLLPGIYNTAGLIDGAGTRLYDPIARDVLL PAALILLTLSIDLRAILRLGPKLVAMYLAASLSIMLGAVVAFWVMRWLHPATVAGDTWAGMAALAGSWIGGGANMLAMRE VFDVDATTFGQFAVVDVGVGYVWMATLIFLAGRARKIDARSGADTRALDALRERMARFQAEHARIPSLADLMVIVAVAFG GVGLAHALANPLAAWCKAQLHWASQFSLDTPFVWVVVLATSLGLLLSFTRARTLEGAGASKIGTLLLYFLIACIGMQMDL LALLDRPWLLLLGLIWIAVHIAVLWGFGRLLRVPFFYFAIGSQSNIGGPASAPVVASAFHPALAPVGVLLGTMGYATGTY LAYLVGITLRAMAGAG >Mature_416_residues MNAAGAALIQNDIVVFGLIAATLGAVFWTAAREQGFWRRFYALVPALLLCYLLPGIYNTAGLIDGAGTRLYDPIARDVLL PAALILLTLSIDLRAILRLGPKLVAMYLAASLSIMLGAVVAFWVMRWLHPATVAGDTWAGMAALAGSWIGGGANMLAMRE VFDVDATTFGQFAVVDVGVGYVWMATLIFLAGRARKIDARSGADTRALDALRERMARFQAEHARIPSLADLMVIVAVAFG GVGLAHALANPLAAWCKAQLHWASQFSLDTPFVWVVVLATSLGLLLSFTRARTLEGAGASKIGTLLLYFLIACIGMQMDL LALLDRPWLLLLGLIWIAVHIAVLWGFGRLLRVPFFYFAIGSQSNIGGPASAPVVASAFHPALAPVGVLLGTMGYATGTY LAYLVGITLRAMAGAG
Specific function: Unknown
COG id: COG5505
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44203; Mature: 44203
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAAGAALIQNDIVVFGLIAATLGAVFWTAAREQGFWRRFYALVPALLLCYLLPGIYNTA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLIDGAGTRLYDPIARDVLLPAALILLTLSIDLRAILRLGPKLVAMYLAASLSIMLGAVV HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFWVMRWLHPATVAGDTWAGMAALAGSWIGGGANMLAMREVFDVDATTFGQFAVVDVGVG HHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEECCHH YVWMATLIFLAGRARKIDARSGADTRALDALRERMARFQAEHARIPSLADLMVIVAVAFG HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GVGLAHALANPLAAWCKAQLHWASQFSLDTPFVWVVVLATSLGLLLSFTRARTLEGAGAS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH KIGTLLLYFLIACIGMQMDLLALLDRPWLLLLGLIWIAVHIAVLWGFGRLLRVPFFYFAI HHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE GSQSNIGGPASAPVVASAFHPALAPVGVLLGTMGYATGTYLAYLVGITLRAMAGAG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNAAGAALIQNDIVVFGLIAATLGAVFWTAAREQGFWRRFYALVPALLLCYLLPGIYNTA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLIDGAGTRLYDPIARDVLLPAALILLTLSIDLRAILRLGPKLVAMYLAASLSIMLGAVV HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFWVMRWLHPATVAGDTWAGMAALAGSWIGGGANMLAMREVFDVDATTFGQFAVVDVGVG HHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEECCHH YVWMATLIFLAGRARKIDARSGADTRALDALRERMARFQAEHARIPSLADLMVIVAVAFG HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GVGLAHALANPLAAWCKAQLHWASQFSLDTPFVWVVVLATSLGLLLSFTRARTLEGAGAS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH KIGTLLLYFLIACIGMQMDLLALLDRPWLLLLGLIWIAVHIAVLWGFGRLLRVPFFYFAI HHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE GSQSNIGGPASAPVVASAFHPALAPVGVLLGTMGYATGTYLAYLVGITLRAMAGAG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA