| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is creC [H]
Identifier: 21243581
GI number: 21243581
Start: 3346147
End: 3347595
Strand: Reverse
Name: creC [H]
Synonym: XAC2854
Alternate gene names: 21243581
Gene position: 3347595-3346147 (Counterclockwise)
Preceding gene: 21243582
Following gene: 21243579
Centisome position: 64.68
GC content: 66.8
Gene sequence:
>1449_bases ATGCGGCTTGGTCTCAAGCTGTTTCTGGGCTTCTTCCTGATCGTGGGCCTGGCCGCGTTCTTCGTGATGCGCGTGTTCGT CAACGAGGTCAAGCCGGGGGTGCGCCAGGCGATGGAATCCACGCTGGTGGATGCGGCCAATGTGCTGGCAGAAGTCGCCA GTAGCGAGTTGGCTGCCGGCACGCTTGCCGATGGCCGCTTCGCGCGCAACGTGGCCAGGGCCCAGCAGCGCGACCCCAAG GCATGGGTATGGCGCTTTCGCAAGAACACGGTGGATTACCGCGTGACCGTCACCGATGCGCGCGGCGTGGTGGTGTTCGA TTCGCTTGGCCGCGACGTGGGCCGCGACAACTCGCGCTGGAACGATGTCTACCGCACGTTGCGCGGCGAATATGGCGCGC GTTCCAGCCCGGAGATCGATGGCGACCCCGCCGCCACGGTGATGCATGTGGCCGCGCCGATCTACGCACCGGATGACCCC GGGCAACTGATCGGCGTGCTGACCCTGGCACAGCCCAATCGCAGCATCGACCCGTTTATCGAGGCCAGCCAGCGCAACAT CCTGCAGCGCGGCGCCTGGTTGATCGGCATTTCAGCGTTGATCGGCATCTTGATGACCTGGTGGTTGATGCGTGGCATCG GCCGGCTCAATCGCTATGCGCAGGCGGTGAGCGCCGGCATCCCGGTACCGCCGCCCGAACCGCGTGGCGACGAGATCGGC GATCTGGGCCAGGCGCTGGAGAGCATGCGCCGCAAGCTGGAAGGCAAGGCGTATGTAGAGCAGTACGTGCAGTCGCTGAC GCACGAGATGAAAAGCCCGCTGGCGGCGATTCGCGGTGCCTCGGAGTTGTTGGCCGAGCCACTGCCGGAGGCCGACCGCC AGCATTTCGTTGCCACCATCCGCGCGCAGGAGCGCCGGCTCACCGAAACCATCGACAAGCTGCTGGCACTGGCCGAGGTG GAGCAGCACGGCTGGCTGCAGAAGCGCGAGCGCGTCGGTATTGACGGGCTGCTGCAGGCTGCAGCGGACGCAGTGGCGCT GCGTGCCGCGGCGGCGGGCGTCACCGTGGAGGTGGATGCGGGGCCTGGCGCGTCAGGCGGTCACCACGTACTTGGCGATG GTTTTCTGCTGCGACAGGCACTGATCAATCTGCTCGAAAACGCCATCGCGTTTTCGCCGCAAAACAGCCATGTGCGCCTG CGGGCGCGGCTGCACGATGGACGCTGGGAGTTGGTGGTCGAAGACCGTGGCAGCGGCGTGCCCGATTACGCGCTCGAGCG CGTCTTCGAGCGGTTCTATTCGTTGGCACGTCCGCAGACCGGCCAGCGCAGCTCCGGGCTTGGCTTGCCGTTCGTGCGCG AGGTCGCGCGCCTGCATGGCGGGGACGTGACGCTGGGCAATCGCCACGGTGGCGGTGCGCGTGCGGTGTTGCGCCTGCCG ATCGGCTGA
Upstream 100 bases:
>100_bases GGTCGACCCGATCCGCACCCACCGTGGCCTTGGCTACGCGCTGGAAGTGTAGGCATGCGCCGGCACTTCCTTGGTGAACT GAGCGAGGCCGCGGGCTGAC
Downstream 100 bases:
>100_bases GTTGCCGCGGTGGCTGGCGCCTGTGGCAGCCGTGCGTTCAAGGCTGCGGCATGCGCCAGAGCACATGCCGCGCCTGCGTC ACGCAGCGTACGGCGCGTGG
Product: sensory histidine kinase CreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MRLGLKLFLGFFLIVGLAAFFVMRVFVNEVKPGVRQAMESTLVDAANVLAEVASSELAAGTLADGRFARNVARAQQRDPK AWVWRFRKNTVDYRVTVTDARGVVVFDSLGRDVGRDNSRWNDVYRTLRGEYGARSSPEIDGDPAATVMHVAAPIYAPDDP GQLIGVLTLAQPNRSIDPFIEASQRNILQRGAWLIGISALIGILMTWWLMRGIGRLNRYAQAVSAGIPVPPPEPRGDEIG DLGQALESMRRKLEGKAYVEQYVQSLTHEMKSPLAAIRGASELLAEPLPEADRQHFVATIRAQERRLTETIDKLLALAEV EQHGWLQKRERVGIDGLLQAAADAVALRAAAAGVTVEVDAGPGASGGHHVLGDGFLLRQALINLLENAIAFSPQNSHVRL RARLHDGRWELVVEDRGSGVPDYALERVFERFYSLARPQTGQRSSGLGLPFVREVARLHGGDVTLGNRHGGGARAVLRLP IG
Sequences:
>Translated_482_residues MRLGLKLFLGFFLIVGLAAFFVMRVFVNEVKPGVRQAMESTLVDAANVLAEVASSELAAGTLADGRFARNVARAQQRDPK AWVWRFRKNTVDYRVTVTDARGVVVFDSLGRDVGRDNSRWNDVYRTLRGEYGARSSPEIDGDPAATVMHVAAPIYAPDDP GQLIGVLTLAQPNRSIDPFIEASQRNILQRGAWLIGISALIGILMTWWLMRGIGRLNRYAQAVSAGIPVPPPEPRGDEIG DLGQALESMRRKLEGKAYVEQYVQSLTHEMKSPLAAIRGASELLAEPLPEADRQHFVATIRAQERRLTETIDKLLALAEV EQHGWLQKRERVGIDGLLQAAADAVALRAAAAGVTVEVDAGPGASGGHHVLGDGFLLRQALINLLENAIAFSPQNSHVRL RARLHDGRWELVVEDRGSGVPDYALERVFERFYSLARPQTGQRSSGLGLPFVREVARLHGGDVTLGNRHGGGARAVLRLP IG >Mature_482_residues MRLGLKLFLGFFLIVGLAAFFVMRVFVNEVKPGVRQAMESTLVDAANVLAEVASSELAAGTLADGRFARNVARAQQRDPK AWVWRFRKNTVDYRVTVTDARGVVVFDSLGRDVGRDNSRWNDVYRTLRGEYGARSSPEIDGDPAATVMHVAAPIYAPDDP GQLIGVLTLAQPNRSIDPFIEASQRNILQRGAWLIGISALIGILMTWWLMRGIGRLNRYAQAVSAGIPVPPPEPRGDEIG DLGQALESMRRKLEGKAYVEQYVQSLTHEMKSPLAAIRGASELLAEPLPEADRQHFVATIRAQERRLTETIDKLLALAEV EQHGWLQKRERVGIDGLLQAAADAVALRAAAAGVTVEVDAGPGASGGHHVLGDGFLLRQALINLLENAIAFSPQNSHVRL RARLHDGRWELVVEDRGSGVPDYALERVFERFYSLARPQTGQRSSGLGLPFVREVARLHGGDVTLGNRHGGGARAVLRLP IG
Specific function: Member of the two-component regulatory system CreC/CreB involved in catabolic regulation. CreC may function as a membrane- associated protein kinase that phosphorylates CreB in response to environmental signals. CreC can also phosphorylate PhoB [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790861, Length=481, Percent_Identity=46.985446985447, Blast_Score=393, Evalue=1e-110, Organism=Escherichia coli, GI48994928, Length=224, Percent_Identity=27.6785714285714, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1786600, Length=223, Percent_Identity=28.2511210762332, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI87082128, Length=315, Percent_Identity=27.3015873015873, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1788393, Length=254, Percent_Identity=27.5590551181102, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1789403, Length=294, Percent_Identity=29.9319727891156, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1788279, Length=274, Percent_Identity=28.1021897810219, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1786912, Length=237, Percent_Identity=26.5822784810127, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1788549, Length=247, Percent_Identity=24.2914979757085, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1788713, Length=253, Percent_Identity=25.6916996047431, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1786783, Length=301, Percent_Identity=21.9269102990033, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1790551, Length=294, Percent_Identity=26.530612244898, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1790436, Length=243, Percent_Identity=26.7489711934156, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87081816, Length=293, Percent_Identity=25.5972696245734, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1787374, Length=237, Percent_Identity=26.5822784810127, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 52662; Mature: 52662
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLGLKLFLGFFLIVGLAAFFVMRVFVNEVKPGVRQAMESTLVDAANVLAEVASSELAAG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TLADGRFARNVARAQQRDPKAWVWRFRKNTVDYRVTVTDARGVVVFDSLGRDVGRDNSRW CCCCHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEEECCCCEEEEHHHCCCCCCCCCHH NDVYRTLRGEYGARSSPEIDGDPAATVMHVAAPIYAPDDPGQLIGVLTLAQPNRSIDPFI HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHH EASQRNILQRGAWLIGISALIGILMTWWLMRGIGRLNRYAQAVSAGIPVPPPEPRGDEIG HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH DLGQALESMRRKLEGKAYVEQYVQSLTHEMKSPLAAIRGASELLAEPLPEADRQHFVATI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHH RAQERRLTETIDKLLALAEVEQHGWLQKRERVGIDGLLQAAADAVALRAAAAGVTVEVDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEC GPGASGGHHVLGDGFLLRQALINLLENAIAFSPQNSHVRLRARLHDGRWELVVEDRGSGV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCCC PDYALERVFERFYSLARPQTGQRSSGLGLPFVREVARLHGGDVTLGNRHGGGARAVLRLP CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCEEEEECC IG CC >Mature Secondary Structure MRLGLKLFLGFFLIVGLAAFFVMRVFVNEVKPGVRQAMESTLVDAANVLAEVASSELAAG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TLADGRFARNVARAQQRDPKAWVWRFRKNTVDYRVTVTDARGVVVFDSLGRDVGRDNSRW CCCCHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEEECCCCEEEEHHHCCCCCCCCCHH NDVYRTLRGEYGARSSPEIDGDPAATVMHVAAPIYAPDDPGQLIGVLTLAQPNRSIDPFI HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHH EASQRNILQRGAWLIGISALIGILMTWWLMRGIGRLNRYAQAVSAGIPVPPPEPRGDEIG HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH DLGQALESMRRKLEGKAYVEQYVQSLTHEMKSPLAAIRGASELLAEPLPEADRQHFVATI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHH RAQERRLTETIDKLLALAEVEQHGWLQKRERVGIDGLLQAAADAVALRAAAAGVTVEVDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEC GPGASGGHHVLGDGFLLRQALINLLENAIAFSPQNSHVRLRARLHDGRWELVVEDRGSGV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCCC PDYALERVFERFYSLARPQTGQRSSGLGLPFVREVARLHGGDVTLGNRHGGGARAVLRLP CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCEEEEECC IG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3531171; 7610040; 9278503; 2835585; 2228961 [H]