| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243577
Identifier: 21243577
GI number: 21243577
Start: 3342411
End: 3343022
Strand: Reverse
Name: 21243577
Synonym: XAC2850
Alternate gene names: NA
Gene position: 3343022-3342411 (Counterclockwise)
Preceding gene: 21243578
Following gene: 21243576
Centisome position: 64.59
GC content: 66.18
Gene sequence:
>612_bases ATGGCCGGCATGACTCGCTCCTCGCCGATGGTGGAAACGGTGCGCGGCACGCAGGTGCTGCCGTATCTGGATGCGGTGGC GCAGCTGCGCATCAGCGTGTTCGCCGCCTGGCCGTATCTGTACCAAGGCGATGCCGCATACGAGCGCGACTATCTGGCGG CCTATGCGGCATCGCCGGAGAGCGTCTTCGTGCTGGCGCGTGATGGCGATGCGGTGATCGGTGCATCGACCGGGTTGCCG CTGCTCGATGACAGCGACGCGTTCCACGCACCGTTCCGCGCGGCCGGCATCGATCCGGCCAGCGTGTTCTATTTCGGCGA ATCGGTGCTGCTGCCGGCGTATCGCGGGCAAGGTATCGGTCATGCATTCTTCGACCGGCGCGAAGCGCATGCACGCGCGC GGGGCCGCTTTGCATTGACCGCGTTCTGTTCGGTGGAACGGGCGCCCGACGACCCGCGCAAGCCAGCCGATTACCGCCCC AACGATGCGTTCTGGCGCAAACGTGGCTACGCCCCGCAGCCGGGCATGCGGGTGCACCTGCACTGGGCGGAGTTGCAACA TGGCGAGATCGACCACAGCTTGTCTGTGTGGACACGTGTGTTGCCGCAGTGA
Upstream 100 bases:
>100_bases CGGTGTGGTTGCTGTGGCAACAGCCGCAGACCCGCGTTTGGAACCACGGTCATTGGCTGCGTTGAAGCATGGCGTTGCAG CCACCTCTTGCTGGCTTACC
Downstream 100 bases:
>100_bases GCGCGGCTAGCGCGCTACGGCGACTGACAGGCGTCGCGAGCAGGCTGCAAGGTCGCTGCACCATGCGTTCGCTTGCCGGC CTGATTGCTTCGCCACCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MAGMTRSSPMVETVRGTQVLPYLDAVAQLRISVFAAWPYLYQGDAAYERDYLAAYAASPESVFVLARDGDAVIGASTGLP LLDDSDAFHAPFRAAGIDPASVFYFGESVLLPAYRGQGIGHAFFDRREAHARARGRFALTAFCSVERAPDDPRKPADYRP NDAFWRKRGYAPQPGMRVHLHWAELQHGEIDHSLSVWTRVLPQ
Sequences:
>Translated_203_residues MAGMTRSSPMVETVRGTQVLPYLDAVAQLRISVFAAWPYLYQGDAAYERDYLAAYAASPESVFVLARDGDAVIGASTGLP LLDDSDAFHAPFRAAGIDPASVFYFGESVLLPAYRGQGIGHAFFDRREAHARARGRFALTAFCSVERAPDDPRKPADYRP NDAFWRKRGYAPQPGMRVHLHWAELQHGEIDHSLSVWTRVLPQ >Mature_202_residues AGMTRSSPMVETVRGTQVLPYLDAVAQLRISVFAAWPYLYQGDAAYERDYLAAYAASPESVFVLARDGDAVIGASTGLPL LDDSDAFHAPFRAAGIDPASVFYFGESVLLPAYRGQGIGHAFFDRREAHARARGRFALTAFCSVERAPDDPRKPADYRPN DAFWRKRGYAPQPGMRVHLHWAELQHGEIDHSLSVWTRVLPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22528; Mature: 22396
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGMTRSSPMVETVRGTQVLPYLDAVAQLRISVFAAWPYLYQGDAAYERDYLAAYAASPE CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHEEECCEEECCCCCCCHHHHEEEECCCC SVFVLARDGDAVIGASTGLPLLDDSDAFHAPFRAAGIDPASVFYFGESVLLPAYRGQGIG EEEEEEECCCEEEECCCCCCCCCCCCCCCCCHHHCCCCHHEEEEECCEEEEECCCCCCCC HAFFDRREAHARARGRFALTAFCSVERAPDDPRKPADYRPNDAFWRKRGYAPQPGMRVHL HHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEE HWAELQHGEIDHSLSVWTRVLPQ EEECCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure AGMTRSSPMVETVRGTQVLPYLDAVAQLRISVFAAWPYLYQGDAAYERDYLAAYAASPE CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHEEECCEEECCCCCCCHHHHEEEECCCC SVFVLARDGDAVIGASTGLPLLDDSDAFHAPFRAAGIDPASVFYFGESVLLPAYRGQGIG EEEEEEECCCEEEECCCCCCCCCCCCCCCCCHHHCCCCHHEEEEECCEEEEECCCCCCCC HAFFDRREAHARARGRFALTAFCSVERAPDDPRKPADYRPNDAFWRKRGYAPQPGMRVHL HHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEE HWAELQHGEIDHSLSVWTRVLPQ EEECCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA