Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is phuR [C]

Identifier: 21243556

GI number: 21243556

Start: 3314256

End: 3316319

Strand: Direct

Name: phuR [C]

Synonym: XAC2829

Alternate gene names: 21243556

Gene position: 3314256-3316319 (Clockwise)

Preceding gene: 21243553

Following gene: 21243557

Centisome position: 64.04

GC content: 65.12

Gene sequence:

>2064_bases
ATGCCCCCTTTTGCACACCCGTTCCGTCGTTCCGCGCTCTCGCTGGCCCTGGCCAGCCTGCTGACCCCTGCCCTGGCCAT
GGCCGAGGACGCTCCGGTCGCTGCCGATGGGCAGACCCCGCCCAGTTCGGACACACGCCACGATGCCAGCCCCTCCAGTG
GGCGCCATATCAAGGATCTGGACAAGGTGGTGGTCACCGCCAGCCCGTTGCGCGATGCGGCCGGTGAGTTGAGCCGCCCG
GTGGAAGTGCTGGCCGGCGAGCGTCTGGACGAGGTGCGCAGTTCCAGCCTGGGCGAAACCGTGGCCAGCCTGCCCGGCGT
ACAGAGTTCCAACTTCGGGCCCGGCGTGGGCCGGCCGATCATCCGCGGCCTGGACGGCCCGCGCGTGGCAGTGCTGCGCG
ACGGCCTGTCGACCCAAGACGTGTCCACCGTCAGCCAGGACCATTCCCCGGCAATCGAGCCGTTCCTGGCCAACCAGATC
GAAGTGCTGAAGGGTCCATCGACGCTGCTGTACGGCTCCGGCGCCATCGGCGGCGTGGTCAACGTGGTCGACGGGCGCAT
CGCCGAGACCCCGGTGGACGGCTTCAGCGGCCGCGCCGAAGTACGCTTCGACGGCGGCGACAAGGACGGCAACACCGACA
TGTTCCGCGTCGATGCCGGCAATGGCAGCGGGCTGTCGATCCACGCAGATGGCGTGTATCGCAACCAGAACGACTACGAC
ACGCCGAAGGGCCGCCAGCTCAACAGCTGGGTCGATTCCAAGGTGGGCTCGATCGGTGCGTCGCTGTCCGGCGATTGGGG
TTTCGTGGGTTTGTCGGCATCGCGTTTCCGCGATAACTACGGCAACCCGGGCGAGCCGGGCGACCCGTCCATCGGCGAGC
GCGGGGTGTCGCTGAAGTTGCAGCAGGACCGCTACGACCTCAAGGGCGGGCTGACCGATCCGTGGGGCGAAGGCAGCGCG
CTGCGTTACAGCTTCGGCCATACCGATTACGCGCATACCGAATTCGAAGGCGCCGAAGTCGGCACCGTGTTCACCAAGCG
GGCCAACGAAGGCCGCGTGGAAGCCTCGTTTACGTTTGGTGGCGGCTGGCAGACTGCATTCGGCCTGCAGGGCAGCGACA
GCACCTTTCAGGCGATCGGCGAAGAATCCTTCGTGCCCAAGACCGATACACGCTCGCTCGGCGCATTCGCCGTTGCACGC
AATAGTTGGGAGCGCGTCACCGCCGAAGTCGGCGCGCGCGTGGACAAGGTCAAGTACCAGACCGATATCGGCGTGGACCG
TGATTTCACTCCGACCAGCTTCTCGGCCAGCGGCGGTTTCCGCTTCAACGAACAATGGCGTCTGACCGCCAACCTGGACC
ACGCCGAGCGTGCGCCGGCCGAAGAAGAACTGTTCGCCAACGGCCCGCATATCGCCACCCTCGCCTTCGAAATCGGCGAT
GCCAATCTGAAGACCGAGAAGGCCAACCAGGCCGAGCTGGGCTTGAATTTCCAGAACGAATGGGTGGATGCCAAGGTGGC
GGCGTACTACAACCGCTACAACGACTTCGTCTACATCGTCGACACCGGCGGCCAGTGGTTCAACGAAGAAGACAACGACT
TCCTGCCGATCCGCCAGTGGACGCAGGCCGATGCGATCTTCCACGGTTTCGAAGGCGAGGCCACCTTCCACCTGGCCAAC
AACGATAACGGTGCGTGGGACCTGCGCGTGTTCGGCGATACGGTGCGTGCGCGTCTGAACGATGGCGGCAACCTGCCGCG
TATCGCACCGGGACGTTTCGGTGCGCAGCTGCGCTGGGATGCCGACCAGTGGCGCGCATCGCTTGGTGCCACCCGCACCC
TGAAGCAGGACAAGGTGGCAGTGAACGAAACCCCGACCGACGGCTACACCTTCGTCGATGCGCATCTGGCGTATCACGTG
GACCACGGCAGCGCCGCGTGGGAAGTGTTCCTGGACGGCAATAACCTGACCAATCAGGACGCACGCGTGCACACCTCCTT
CCTCAAGGACGATGTGATGCTTCCTGGCCGCAGCGCTTCGTTCGGCGTGCGCTTGTTCTTCTGA

Upstream 100 bases:

>100_bases
CATCGATGCATCGCGCAGTCATGCGGGTTCGCCGCCGGCGCAGTAGGCAAGCTGCGCCTCACCACTGATACACAGTAACA
ATTACAGAGTCCGGCCCACC

Downstream 100 bases:

>100_bases
CAGCAGTCTCTCTCCCCTGCTGAGTGGAAGGAAGGCCGCCTTCGGGCGGCCTTTTTGTGTGCGTTGCCGACCTATCAGCG
CCTCCTGCGGAGTGCTGCAC

Product: outer membrane hemin receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 687; Mature: 686

Protein sequence:

>687_residues
MPPFAHPFRRSALSLALASLLTPALAMAEDAPVAADGQTPPSSDTRHDASPSSGRHIKDLDKVVVTASPLRDAAGELSRP
VEVLAGERLDEVRSSSLGETVASLPGVQSSNFGPGVGRPIIRGLDGPRVAVLRDGLSTQDVSTVSQDHSPAIEPFLANQI
EVLKGPSTLLYGSGAIGGVVNVVDGRIAETPVDGFSGRAEVRFDGGDKDGNTDMFRVDAGNGSGLSIHADGVYRNQNDYD
TPKGRQLNSWVDSKVGSIGASLSGDWGFVGLSASRFRDNYGNPGEPGDPSIGERGVSLKLQQDRYDLKGGLTDPWGEGSA
LRYSFGHTDYAHTEFEGAEVGTVFTKRANEGRVEASFTFGGGWQTAFGLQGSDSTFQAIGEESFVPKTDTRSLGAFAVAR
NSWERVTAEVGARVDKVKYQTDIGVDRDFTPTSFSASGGFRFNEQWRLTANLDHAERAPAEEELFANGPHIATLAFEIGD
ANLKTEKANQAELGLNFQNEWVDAKVAAYYNRYNDFVYIVDTGGQWFNEEDNDFLPIRQWTQADAIFHGFEGEATFHLAN
NDNGAWDLRVFGDTVRARLNDGGNLPRIAPGRFGAQLRWDADQWRASLGATRTLKQDKVAVNETPTDGYTFVDAHLAYHV
DHGSAAWEVFLDGNNLTNQDARVHTSFLKDDVMLPGRSASFGVRLFF

Sequences:

>Translated_687_residues
MPPFAHPFRRSALSLALASLLTPALAMAEDAPVAADGQTPPSSDTRHDASPSSGRHIKDLDKVVVTASPLRDAAGELSRP
VEVLAGERLDEVRSSSLGETVASLPGVQSSNFGPGVGRPIIRGLDGPRVAVLRDGLSTQDVSTVSQDHSPAIEPFLANQI
EVLKGPSTLLYGSGAIGGVVNVVDGRIAETPVDGFSGRAEVRFDGGDKDGNTDMFRVDAGNGSGLSIHADGVYRNQNDYD
TPKGRQLNSWVDSKVGSIGASLSGDWGFVGLSASRFRDNYGNPGEPGDPSIGERGVSLKLQQDRYDLKGGLTDPWGEGSA
LRYSFGHTDYAHTEFEGAEVGTVFTKRANEGRVEASFTFGGGWQTAFGLQGSDSTFQAIGEESFVPKTDTRSLGAFAVAR
NSWERVTAEVGARVDKVKYQTDIGVDRDFTPTSFSASGGFRFNEQWRLTANLDHAERAPAEEELFANGPHIATLAFEIGD
ANLKTEKANQAELGLNFQNEWVDAKVAAYYNRYNDFVYIVDTGGQWFNEEDNDFLPIRQWTQADAIFHGFEGEATFHLAN
NDNGAWDLRVFGDTVRARLNDGGNLPRIAPGRFGAQLRWDADQWRASLGATRTLKQDKVAVNETPTDGYTFVDAHLAYHV
DHGSAAWEVFLDGNNLTNQDARVHTSFLKDDVMLPGRSASFGVRLFF
>Mature_686_residues
PPFAHPFRRSALSLALASLLTPALAMAEDAPVAADGQTPPSSDTRHDASPSSGRHIKDLDKVVVTASPLRDAAGELSRPV
EVLAGERLDEVRSSSLGETVASLPGVQSSNFGPGVGRPIIRGLDGPRVAVLRDGLSTQDVSTVSQDHSPAIEPFLANQIE
VLKGPSTLLYGSGAIGGVVNVVDGRIAETPVDGFSGRAEVRFDGGDKDGNTDMFRVDAGNGSGLSIHADGVYRNQNDYDT
PKGRQLNSWVDSKVGSIGASLSGDWGFVGLSASRFRDNYGNPGEPGDPSIGERGVSLKLQQDRYDLKGGLTDPWGEGSAL
RYSFGHTDYAHTEFEGAEVGTVFTKRANEGRVEASFTFGGGWQTAFGLQGSDSTFQAIGEESFVPKTDTRSLGAFAVARN
SWERVTAEVGARVDKVKYQTDIGVDRDFTPTSFSASGGFRFNEQWRLTANLDHAERAPAEEELFANGPHIATLAFEIGDA
NLKTEKANQAELGLNFQNEWVDAKVAAYYNRYNDFVYIVDTGGQWFNEEDNDFLPIRQWTQADAIFHGFEGEATFHLANN
DNGAWDLRVFGDTVRARLNDGGNLPRIAPGRFGAQLRWDADQWRASLGATRTLKQDKVAVNETPTDGYTFVDAHLAYHVD
HGSAAWEVFLDGNNLTNQDARVHTSFLKDDVMLPGRSASFGVRLFF

Specific function: Probable receptor, tonB-dependent [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1790405, Length=492, Percent_Identity=23.9837398373984, Blast_Score=67, Evalue=5e-12,
Organism=Escherichia coli, GI1788478, Length=187, Percent_Identity=27.807486631016, Blast_Score=66, Evalue=9e-12,

Paralogues:

None

Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 74281; Mature: 74150

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPFAHPFRRSALSLALASLLTPALAMAEDAPVAADGQTPPSSDTRHDASPSSGRHIKDL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
DKVVVTASPLRDAAGELSRPVEVLAGERLDEVRSSSLGETVASLPGVQSSNFGPGVGRPI
HHEEEECCCHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
IRGLDGPRVAVLRDGLSTQDVSTVSQDHSPAIEPFLANQIEVLKGPSTLLYGSGAIGGVV
HHCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCHHHHCCCEEECCCCEEEECCCCCCCEE
NVVDGRIAETPVDGFSGRAEVRFDGGDKDGNTDMFRVDAGNGSGLSIHADGVYRNQNDYD
ECCCCCEECCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCEEECCCCCC
TPKGRQLNSWVDSKVGSIGASLSGDWGFVGLSASRFRDNYGNPGEPGDPSIGERGVSLKL
CCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHCCCCCCCCCCCCCCCCCCCEEEE
QQDRYDLKGGLTDPWGEGSALRYSFGHTDYAHTEFEGAEVGTVFTKRANEGRVEASFTFG
CCCCHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEECEEEEECCCCCEEEEEEEEC
GGWQTAFGLQGSDSTFQAIGEESFVPKTDTRSLGAFAVARNSWERVTAEVGARVDKVKYQ
CCCCEEECCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEHHCCHHHHHHHHCCHHHHEEEE
TDIGVDRDFTPTSFSASGGFRFNEQWRLTANLDHAERAPAEEELFANGPHIATLAFEIGD
ECCCCCCCCCCCCCCCCCCCEECCEEEEEECCCHHHCCCCHHHHHCCCCEEEEEEEEECC
ANLKTEKANQAELGLNFQNEWVDAKVAAYYNRYNDFVYIVDTGGQWFNEEDNDFLPIRQW
CCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEECCHHH
TQADAIFHGFEGEATFHLANNDNGAWDLRVFGDTVRARLNDGGNLPRIAPGRFGAQLRWD
CCHHHEEECCCCCEEEEEECCCCCEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCEEEEC
ADQWRASLGATRTLKQDKVAVNETPTDGYTFVDAHLAYHVDHGSAAWEVFLDGNNLTNQD
HHHHHHHHCCCCCCCCCCEEECCCCCCCEEEEEEEEEEEEECCCEEEEEEECCCCCCCCC
ARVHTSFLKDDVMLPGRSASFGVRLFF
HHHHHHHHHCCCCCCCCCCCCCEEEEC
>Mature Secondary Structure 
PPFAHPFRRSALSLALASLLTPALAMAEDAPVAADGQTPPSSDTRHDASPSSGRHIKDL
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
DKVVVTASPLRDAAGELSRPVEVLAGERLDEVRSSSLGETVASLPGVQSSNFGPGVGRPI
HHEEEECCCHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
IRGLDGPRVAVLRDGLSTQDVSTVSQDHSPAIEPFLANQIEVLKGPSTLLYGSGAIGGVV
HHCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCHHHHCCCEEECCCCEEEECCCCCCCEE
NVVDGRIAETPVDGFSGRAEVRFDGGDKDGNTDMFRVDAGNGSGLSIHADGVYRNQNDYD
ECCCCCEECCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCEEECCCCCC
TPKGRQLNSWVDSKVGSIGASLSGDWGFVGLSASRFRDNYGNPGEPGDPSIGERGVSLKL
CCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHCCCCCCCCCCCCCCCCCCCEEEE
QQDRYDLKGGLTDPWGEGSALRYSFGHTDYAHTEFEGAEVGTVFTKRANEGRVEASFTFG
CCCCHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEECEEEEECCCCCEEEEEEEEC
GGWQTAFGLQGSDSTFQAIGEESFVPKTDTRSLGAFAVARNSWERVTAEVGARVDKVKYQ
CCCCEEECCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEHHCCHHHHHHHHCCHHHHEEEE
TDIGVDRDFTPTSFSASGGFRFNEQWRLTANLDHAERAPAEEELFANGPHIATLAFEIGD
ECCCCCCCCCCCCCCCCCCCEECCEEEEEECCCHHHCCCCHHHHHCCCCEEEEEEEEECC
ANLKTEKANQAELGLNFQNEWVDAKVAAYYNRYNDFVYIVDTGGQWFNEEDNDFLPIRQW
CCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEECCHHH
TQADAIFHGFEGEATFHLANNDNGAWDLRVFGDTVRARLNDGGNLPRIAPGRFGAQLRWD
CCHHHEEECCCCCEEEEEECCCCCEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCEEEEC
ADQWRASLGATRTLKQDKVAVNETPTDGYTFVDAHLAYHVDHGSAAWEVFLDGNNLTNQD
HHHHHHHHCCCCCCCCCCEEECCCCCCCEEEEEEEEEEEEECCCEEEEEEECCCCCCCCC
ARVHTSFLKDDVMLPGRSASFGVRLFF
HHHHHHHHHCCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]