| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243545
Identifier: 21243545
GI number: 21243545
Start: 3303820
End: 3304221
Strand: Reverse
Name: 21243545
Synonym: XAC2818
Alternate gene names: NA
Gene position: 3304221-3303820 (Counterclockwise)
Preceding gene: 21243546
Following gene: 21243540
Centisome position: 63.84
GC content: 66.67
Gene sequence:
>402_bases ATGCAACTGACGATCGAACTGCAGATGCTGGGCTGGGCGATGGTGCTCGGGTTGGTGCAATTGCTGGCTGCCTCGGCCGG CATGACCGCCCAACGCGGCACCAAGTGGAACGCCAGCGCACGCGATGGCGAGGCCAAGCCGCTGACCGGCGTGGCCGCCC GGTTGGACCGCGCGTTCCGCAACTATCTGGAGACCTTTCCGATCTTCGCGGCCGCCGTGCTGGCGGTGAGCGTGGCCGGG CGCACCAGCGCAGACACAGCACTCGCCGTGCAGCTCTACCTGTGGGCGCGCGTGGCCTATGTGCCGGTGTATGCCGCGGG TATTGCGTACCTGCGCAGCGCCATCTGGGTGGTGTCGTTCTGGGGCATCATCAAACTGGTGCGCGCACTGCTGGGCATTT GA
Upstream 100 bases:
>100_bases CTGGTGTCGTTCCGTCTGGACGAAGACAAGACCTGGCGGTTGGCCGGTTACAGCCTGCGCACGGCGGTGAAGTGATGTTT CCATCGGCCGGGAGAAACGT
Downstream 100 bases:
>100_bases TGCAGCGTCGCCGGCAGGTGCGAGCTTCAATCAGTCGCTTGCACCCGCGCCAAGATTGCAGCGATGGCCGCCTGCGCATC GCCGGTACGCAGGGCTTGTT
Product: inner membrane protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MQLTIELQMLGWAMVLGLVQLLAASAGMTAQRGTKWNASARDGEAKPLTGVAARLDRAFRNYLETFPIFAAAVLAVSVAG RTSADTALAVQLYLWARVAYVPVYAAGIAYLRSAIWVVSFWGIIKLVRALLGI
Sequences:
>Translated_133_residues MQLTIELQMLGWAMVLGLVQLLAASAGMTAQRGTKWNASARDGEAKPLTGVAARLDRAFRNYLETFPIFAAAVLAVSVAG RTSADTALAVQLYLWARVAYVPVYAAGIAYLRSAIWVVSFWGIIKLVRALLGI >Mature_133_residues MQLTIELQMLGWAMVLGLVQLLAASAGMTAQRGTKWNASARDGEAKPLTGVAARLDRAFRNYLETFPIFAAAVLAVSVAG RTSADTALAVQLYLWARVAYVPVYAAGIAYLRSAIWVVSFWGIIKLVRALLGI
Specific function: Unknown
COG id: COG3686
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14328; Mature: 14328
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLTIELQMLGWAMVLGLVQLLAASAGMTAQRGTKWNASARDGEAKPLTGVAARLDRAFR CEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH NYLETFPIFAAAVLAVSVAGRTSADTALAVQLYLWARVAYVPVYAAGIAYLRSAIWVVSF HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WGIIKLVRALLGI HHHHHHHHHHHCC >Mature Secondary Structure MQLTIELQMLGWAMVLGLVQLLAASAGMTAQRGTKWNASARDGEAKPLTGVAARLDRAFR CEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH NYLETFPIFAAAVLAVSVAGRTSADTALAVQLYLWARVAYVPVYAAGIAYLRSAIWVVSF HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WGIIKLVRALLGI HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA