Click here to switch to the map view.

The map label for this gene is ybcJ [C]

Identifier: 21243543

GI number: 21243543

Start: 3303234

End: 3303476

Strand: Direct

Name: ybcJ [C]

Synonym: XAC2816

Alternate gene names: 21243543

Gene position: 3303234-3303476 (Clockwise)

Preceding gene: 77748674

Following gene: 21243544

Centisome position: 63.82

GC content: 64.2

Gene sequence:

>243_bases
ATGCAATACCTGGAATTCGACCTGGACGGCGACTACATCGAACTCAACCAGTTGCTCAAGCTGGCCGGCATTGCCGACAG
CGGCGGCCAGGGCAAGGCGATCGTCGCCAGCGGCGCGGTCAGCGTCGACGGCATGCAGGAGCTGCGCAAGACCGCCAAGA
TCCGCCCCGGCCAGCTGGTACAGCTGGACGGTGTGGAAATTCGCGTACTGGCATGGAACCCGGACGCCGAGCCTGACGCA
TGA

Upstream 100 bases:

>100_bases
CGGCCGCAGCGTCGCTCGTACCGAGACCCTGCTGGAACAGATCGCGCGTTTCCAGCGCGAGTAGGCGGATAATCGCGGCC
TCCCTGCGACCGAGCGCACC

Downstream 100 bases:

>100_bases
AGGTGGTGGAGATCAGCCGGCGCAACAACGCACCTTCGGCCGACGATCCGATCCACGACGTCTGTGTTTTTTCGATCGCC
ATCGACTCGGACCAGCCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MQYLEFDLDGDYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGMQELRKTAKIRPGQLVQLDGVEIRVLAWNPDAEPDA

Sequences:

>Translated_80_residues
MQYLEFDLDGDYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGMQELRKTAKIRPGQLVQLDGVEIRVLAWNPDAEPDA
>Mature_80_residues
MQYLEFDLDGDYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGMQELRKTAKIRPGQLVQLDGVEIRVLAWNPDAEPDA

Specific function: Unknown

COG id: COG2501

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8584; Mature: 8584

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYLEFDLDGDYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGMQELRKTAKIRPGQLV
CCEEEECCCCCEEHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCEE
QLDGVEIRVLAWNPDAEPDA
EECCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MQYLEFDLDGDYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGMQELRKTAKIRPGQLV
CCEEEECCCCCEEHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCEE
QLDGVEIRVLAWNPDAEPDA
EECCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA