| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243521
Identifier: 21243521
GI number: 21243521
Start: 3273735
End: 3274538
Strand: Reverse
Name: 21243521
Synonym: XAC2794
Alternate gene names: NA
Gene position: 3274538-3273735 (Counterclockwise)
Preceding gene: 21243522
Following gene: 21243517
Centisome position: 63.27
GC content: 69.28
Gene sequence:
>804_bases ATGAGCCGCGCCATGCAGCGGTATGCCACGGCCATGCTGCTGGGATGGGCGCTGTGCGGGTGTGCAAAGCATCGCGTAGA GATGGCGGCCGACGGCGGCGCTGCGGCGCCGGCACCGCCCGCCGCGCAGGGCAATGCCTTGGCCTACGAGCACGATGTGC GCATCGAGCTGCCTGCAGACCAGATCGGCCAGCGCATCGCCGCGATACGCACTGCCTGCCAGGGCGCGCAGTTCGGCGAT TGCGCCTTGCTGGCGGTCGAGCAGGAAGGCGGGCGCGATCCCAGTGGGCGCGTCAGCGTACGGCTGGCACCGGACGGGAT CGAACCCATGGTGCAGTTGGCCGGCCAGCACGGCGATGTCGCCGCGCGTAGCACCCGGGCCGAAGATCTGGCGCAGCAGA TCGCCGACACCAGCCTGGCGCAGGCGCGATTGCAGAAAGAGCATGCGCGCCTGCTGGAATTGCAGCAGCGCCGCGATCTG GCGGTGACCGATCTGCTGGCCTTGTCCAAGCGGCTGGCCGAGATCGAAGCCGAAGCGCAGCAGACCCAGCAGCAGGCCGC GCAGCAGCAACGCAGGGTGCGCACGCAGTTGCTGACGCTCAATTTCCGCAGTACCGGTGGCGCGCAGGGCAGGGGCGAGA TCGCAGAAGCCGCCGCCGAGTTCGGCGAGGTATTTTCCAGCAGCGTGGCATTCGTCATCCGCGCGGTGGCGGCGCTGTTG CCGGTGGTTGCGCTCGCACTGATCGCCGGCTGGTTGCTGCTGCAGGCATGGCGCTGGCGCGTACGTCGGCGCCGGATGTC CTGA
Upstream 100 bases:
>100_bases ACCCCAAGACCGGCGCAATGGGCGTCGCGGTCAACGTGCGTTGCCTGCCGGCCCTGGATCTTGCCGGGCTGCAGGTGCAT GCAGTCGACGGGGCCAGCCG
Downstream 100 bases:
>100_bases GGCACCGCAGCTGCGCGGCCCTGCCGTGCAGCTGCGGGAAAGTCCGACTTGTCATTGCATGCGGCGTGCGTCGTTGGTGC TGGGTCGCACGTCGCTTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MSRAMQRYATAMLLGWALCGCAKHRVEMAADGGAAAPAPPAAQGNALAYEHDVRIELPADQIGQRIAAIRTACQGAQFGD CALLAVEQEGGRDPSGRVSVRLAPDGIEPMVQLAGQHGDVAARSTRAEDLAQQIADTSLAQARLQKEHARLLELQQRRDL AVTDLLALSKRLAEIEAEAQQTQQQAAQQQRRVRTQLLTLNFRSTGGAQGRGEIAEAAAEFGEVFSSSVAFVIRAVAALL PVVALALIAGWLLLQAWRWRVRRRRMS
Sequences:
>Translated_267_residues MSRAMQRYATAMLLGWALCGCAKHRVEMAADGGAAAPAPPAAQGNALAYEHDVRIELPADQIGQRIAAIRTACQGAQFGD CALLAVEQEGGRDPSGRVSVRLAPDGIEPMVQLAGQHGDVAARSTRAEDLAQQIADTSLAQARLQKEHARLLELQQRRDL AVTDLLALSKRLAEIEAEAQQTQQQAAQQQRRVRTQLLTLNFRSTGGAQGRGEIAEAAAEFGEVFSSSVAFVIRAVAALL PVVALALIAGWLLLQAWRWRVRRRRMS >Mature_266_residues SRAMQRYATAMLLGWALCGCAKHRVEMAADGGAAAPAPPAAQGNALAYEHDVRIELPADQIGQRIAAIRTACQGAQFGDC ALLAVEQEGGRDPSGRVSVRLAPDGIEPMVQLAGQHGDVAARSTRAEDLAQQIADTSLAQARLQKEHARLLELQQRRDLA VTDLLALSKRLAEIEAEAQQTQQQAAQQQRRVRTQLLTLNFRSTGGAQGRGEIAEAAAEFGEVFSSSVAFVIRAVAALLP VVALALIAGWLLLQAWRWRVRRRRMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28817; Mature: 28686
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAMQRYATAMLLGWALCGCAKHRVEMAADGGAAAPAPPAAQGNALAYEHDVRIELPAD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEECCHH QIGQRIAAIRTACQGAQFGDCALLAVEQEGGRDPSGRVSVRLAPDGIEPMVQLAGQHGDV HHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCH AARSTRAEDLAQQIADTSLAQARLQKEHARLLELQQRRDLAVTDLLALSKRLAEIEAEAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH QTQQQAAQQQRRVRTQLLTLNFRSTGGAQGRGEIAEAAAEFGEVFSSSVAFVIRAVAALL HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVVALALIAGWLLLQAWRWRVRRRRMS HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRAMQRYATAMLLGWALCGCAKHRVEMAADGGAAAPAPPAAQGNALAYEHDVRIELPAD CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEECCHH QIGQRIAAIRTACQGAQFGDCALLAVEQEGGRDPSGRVSVRLAPDGIEPMVQLAGQHGDV HHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCH AARSTRAEDLAQQIADTSLAQARLQKEHARLLELQQRRDLAVTDLLALSKRLAEIEAEAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH QTQQQAAQQQRRVRTQLLTLNFRSTGGAQGRGEIAEAAAEFGEVFSSSVAFVIRAVAALL HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVVALALIAGWLLLQAWRWRVRRRRMS HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA