| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yjgA [C]
Identifier: 21243493
GI number: 21243493
Start: 3239361
End: 3240011
Strand: Direct
Name: yjgA [C]
Synonym: XAC2766
Alternate gene names: 21243493
Gene position: 3239361-3240011 (Clockwise)
Preceding gene: 21243490
Following gene: 21243495
Centisome position: 62.59
GC content: 64.98
Gene sequence:
>651_bases TTGTTCCGCCGACGCCCGGCCGTTCGAGGCCGGAGATGTTTATCAACCAAGTTTCGGGATGTGGTGGCAATGCGCGGACG CGATGAAGAGACCGGTGAATTTCGCGGCGCCAGCCGCAGCCAGCAGCGGCGCGAGGCGCTGGAGATTTTCGACCTGGGCG AAAAGCTGGTGGCGCTGACCCCGGCGCAGTTGGCCAAGTTGCCGGTGCCCGAATCGCTGATCCCGCATATCGAAGAGAGC AAGCGGATCACCTCGCATATCGCGCACAAGCGGCAATTGGCGTTTCTGGCCAAGCACATGCGCCGCGAGGACGAGCAGAC CCTGGCCGCGATCCGCGATGCGCTGGACGCCAATAGCGACACCGCGCGCCGCGAAGTGGCGGCGATCCACCGGGTCGAGC GCTGGCGCGAACGCCTGCTCGCCGAAGGCGACGTGGCGCTGGCCGAACTGCTGGAAGCCTACCCGGCTGCCGACCGCCAG CAACTGCGTCAGCTGGTACGCAACGCGATCCACGAACGCGCCAAAAACAAGCCCCCGCGCGCCTACCGCGAACTGTTCCA GGTGCTGCGCGACCTGTCTCAAGAGCAGGGATTGGAGAGTGGGGATTCGGAATTGGAAGACGGCGAATCGGCGTCGGAGG ACGACGAATAA
Upstream 100 bases:
>100_bases TTTCGGAGGAGAGTACGTTCAATGCTTTATCCTTGGAAACGCGGATCCGTCCGCGAAAGCCCGGCTGTCCATGGCCGGAG TGTTTGAATTCGGTGCGGAG
Downstream 100 bases:
>100_bases GGATCCGCTCGATCCATCAATCGAGGCAACGGCCATCCCAGCCGTTGCCAATTCCAAATCCCGACTCCCGATTCCCCTCT GCTGAACCGGCAAACGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MFRRRPAVRGRRCLSTKFRDVVAMRGRDEETGEFRGASRSQQRREALEIFDLGEKLVALTPAQLAKLPVPESLIPHIEES KRITSHIAHKRQLAFLAKHMRREDEQTLAAIRDALDANSDTARREVAAIHRVERWRERLLAEGDVALAELLEAYPAADRQ QLRQLVRNAIHERAKNKPPRAYRELFQVLRDLSQEQGLESGDSELEDGESASEDDE
Sequences:
>Translated_216_residues MFRRRPAVRGRRCLSTKFRDVVAMRGRDEETGEFRGASRSQQRREALEIFDLGEKLVALTPAQLAKLPVPESLIPHIEES KRITSHIAHKRQLAFLAKHMRREDEQTLAAIRDALDANSDTARREVAAIHRVERWRERLLAEGDVALAELLEAYPAADRQ QLRQLVRNAIHERAKNKPPRAYRELFQVLRDLSQEQGLESGDSELEDGESASEDDE >Mature_216_residues MFRRRPAVRGRRCLSTKFRDVVAMRGRDEETGEFRGASRSQQRREALEIFDLGEKLVALTPAQLAKLPVPESLIPHIEES KRITSHIAHKRQLAFLAKHMRREDEQTLAAIRDALDANSDTARREVAAIHRVERWRERLLAEGDVALAELLEAYPAADRQ QLRQLVRNAIHERAKNKPPRAYRELFQVLRDLSQEQGLESGDSELEDGESASEDDE
Specific function: Unknown
COG id: COG3028
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0307 family [H]
Homologues:
Organism=Escherichia coli, GI1790681, Length=161, Percent_Identity=39.7515527950311, Blast_Score=110, Evalue=9e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023153 - InterPro: IPR006839 [H]
Pfam domain/function: PF04751 DUF615 [H]
EC number: NA
Molecular weight: Translated: 24794; Mature: 24794
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRRRPAVRGRRCLSTKFRDVVAMRGRDEETGEFRGASRSQQRREALEIFDLGEKLVALT CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC PAQLAKLPVPESLIPHIEESKRITSHIAHKRQLAFLAKHMRREDEQTLAAIRDALDANSD HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH TARREVAAIHRVERWRERLLAEGDVALAELLEAYPAADRQQLRQLVRNAIHERAKNKPPR HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCH AYRELFQVLRDLSQEQGLESGDSELEDGESASEDDE HHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCC >Mature Secondary Structure MFRRRPAVRGRRCLSTKFRDVVAMRGRDEETGEFRGASRSQQRREALEIFDLGEKLVALT CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC PAQLAKLPVPESLIPHIEESKRITSHIAHKRQLAFLAKHMRREDEQTLAAIRDALDANSD HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH TARREVAAIHRVERWRERLLAEGDVALAELLEAYPAADRQQLRQLVRNAIHERAKNKPPR HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCH AYRELFQVLRDLSQEQGLESGDSELEDGESASEDDE HHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA