| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is gltT [H]
Identifier: 21243485
GI number: 21243485
Start: 3229477
End: 3230817
Strand: Reverse
Name: gltT [H]
Synonym: XAC2758
Alternate gene names: 21243485
Gene position: 3230817-3229477 (Counterclockwise)
Preceding gene: 21243491
Following gene: 21243484
Centisome position: 62.42
GC content: 63.61
Gene sequence:
>1341_bases ATGAAACTGGTTGCGGCGTGGTTGCGCATTCCGTTCTGGCAGCGCGTGGTGGCCGGCTTCGTCCTCGGCGCGCTGGTCGG CTGGGCCATGGGCCCGGCGGCCGATGTGTGGTTCGGTCCCCTGGGTGACCTGTACGTCACGCTGATCAAGATGATCGCCA TCCCGCTGGTGTTCTTTGCGGTGATCAATGCGATCTCGTCGTTGCACGGGCAAAAGTCGGTTGCCGCACTCGGCGGGCGC ACGTTCTTGTGGTTTGTGATCACCGCAGCATTGGCGGTGGCCGTGGGCCTGGCGGTCGGCACGATCATGCAGCCGGGTGC CGGCCATTTCAGCTTGAGCGTGGATTCGGGCTGGAAACCGCGCGATGTGCCCAGCCCGGTCCAAGTGCTGCTGGATGTGG TGCCGTCCAACCCGTTCTACGCATTGACCGGCATCGGCACCAAGACCAACGCGGCCGGCGAAACGGTGCTGGCGGCGGGG CGTGGCTCGATCCTGCCGGTGATCTTCTTCGCCGCGTTGCTGGGCTTTGCGATGGTCAAGCTTGGCGAGCGTGTGGCCGA GGCGCGCAAGCTCACCGGGCAGATGAGCGACATCATGATCCAGGTGACGCGCTTCGTGCTGGAGATGACTCCGCTCGGCA CCTTTGGGCTGATCGCTGGCCTGGTCGGCAGCTACGGCTTTTCGAAGCTGCTGCCGTTCGGCAATTTCGTGCTGGCGCTG TATGTGGCCTGCGCGATCCACATTGTGGTGGTCTACAGCAGCCTGTTGCTCGCACATGGGCTCAACCCGTGGAAGTTTTT CCGCGGTGCCGCGCCTGGCATGCAGGTGGCGTTCGTCAGTTCGTCGAGCTTTGCGGCAATGCCGGTGGCGATGCGTTCGA TTACCCACAACCTGGGGGTCAGCAAGGATTACGCTGCATTCGCGGTACCGCTGGGCGCCAGCATCAAGATGGATGGCTGC GGCGCAATCTTTCCGGCGTTGTGCGCGGTGTTCATCGCGCAATACACCGGCGTCCCCCTGACCGCCAACCAGTATTTCGT GGTGCTGATCGCCTCGGTGCTCGGCAGCTTCGGCACGGCCGGCGTACCGGGCACGGCGGTCATCATGGCCACGGTGGTGC TGAGTGCGGCCAATCTGCCGTTGGAAGTGATCGGGTACCTGTATGCGATCGACCGCATCCTGGACATGATGCGCACCATG ACCAACGTCACCGGGCAGATGCTGGTGCCGGTGCTGGTGGCCAAGCAAACCGGCCTGCTCGACAAGAGCATCTACGAATC CGCCTCCACCAATGTGGGACTGGAAGAACCGCCGGCTGACAGCGCCAAACCACTGCGCTGA
Upstream 100 bases:
>100_bases GGTGTCACACCGATGACACAGCGCTGTTCCAGCTGTGGTCTCGCGAGCAGGGCAGCCCTGGGCTATGGTGCATGCACTTT CCCCCGGAAGATTCGACGAC
Downstream 100 bases:
>100_bases GGCAGCTTGATGCGTGCCGGATCTCCACACCTGCGCGAACGGCTGCAGCAGTTGCCCGAGCTGGAGCGCATGGATGGCGT GTTGGTGCAGCGCGGCTTGG
Product: glutamate symport protein
Products: orotate [Cytoplasm]; fumarate [Cytoplasm]; malate [Cytoplasm]; Na (I) [Cytoplasm]; succinate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MKLVAAWLRIPFWQRVVAGFVLGALVGWAMGPAADVWFGPLGDLYVTLIKMIAIPLVFFAVINAISSLHGQKSVAALGGR TFLWFVITAALAVAVGLAVGTIMQPGAGHFSLSVDSGWKPRDVPSPVQVLLDVVPSNPFYALTGIGTKTNAAGETVLAAG RGSILPVIFFAALLGFAMVKLGERVAEARKLTGQMSDIMIQVTRFVLEMTPLGTFGLIAGLVGSYGFSKLLPFGNFVLAL YVACAIHIVVVYSSLLLAHGLNPWKFFRGAAPGMQVAFVSSSSFAAMPVAMRSITHNLGVSKDYAAFAVPLGASIKMDGC GAIFPALCAVFIAQYTGVPLTANQYFVVLIASVLGSFGTAGVPGTAVIMATVVLSAANLPLEVIGYLYAIDRILDMMRTM TNVTGQMLVPVLVAKQTGLLDKSIYESASTNVGLEEPPADSAKPLR
Sequences:
>Translated_446_residues MKLVAAWLRIPFWQRVVAGFVLGALVGWAMGPAADVWFGPLGDLYVTLIKMIAIPLVFFAVINAISSLHGQKSVAALGGR TFLWFVITAALAVAVGLAVGTIMQPGAGHFSLSVDSGWKPRDVPSPVQVLLDVVPSNPFYALTGIGTKTNAAGETVLAAG RGSILPVIFFAALLGFAMVKLGERVAEARKLTGQMSDIMIQVTRFVLEMTPLGTFGLIAGLVGSYGFSKLLPFGNFVLAL YVACAIHIVVVYSSLLLAHGLNPWKFFRGAAPGMQVAFVSSSSFAAMPVAMRSITHNLGVSKDYAAFAVPLGASIKMDGC GAIFPALCAVFIAQYTGVPLTANQYFVVLIASVLGSFGTAGVPGTAVIMATVVLSAANLPLEVIGYLYAIDRILDMMRTM TNVTGQMLVPVLVAKQTGLLDKSIYESASTNVGLEEPPADSAKPLR >Mature_446_residues MKLVAAWLRIPFWQRVVAGFVLGALVGWAMGPAADVWFGPLGDLYVTLIKMIAIPLVFFAVINAISSLHGQKSVAALGGR TFLWFVITAALAVAVGLAVGTIMQPGAGHFSLSVDSGWKPRDVPSPVQVLLDVVPSNPFYALTGIGTKTNAAGETVLAAG RGSILPVIFFAALLGFAMVKLGERVAEARKLTGQMSDIMIQVTRFVLEMTPLGTFGLIAGLVGSYGFSKLLPFGNFVLAL YVACAIHIVVVYSSLLLAHGLNPWKFFRGAAPGMQVAFVSSSSFAAMPVAMRSITHNLGVSKDYAAFAVPLGASIKMDGC GAIFPALCAVFIAQYTGVPLTANQYFVVLIASVLGSFGTAGVPGTAVIMATVVLSAANLPLEVIGYLYAIDRILDMMRTM TNVTGQMLVPVLVAKQTGLLDKSIYESASTNVGLEEPPADSAKPLR
Specific function: Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate from the periplasm across the membrane [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI21314632, Length=393, Percent_Identity=27.9898218829517, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI40254478, Length=411, Percent_Identity=26.7639902676399, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI5032093, Length=443, Percent_Identity=27.9909706546275, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI169790839, Length=434, Percent_Identity=26.036866359447, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI66773030, Length=267, Percent_Identity=31.4606741573034, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI194239697, Length=449, Percent_Identity=24.9443207126949, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI223468564, Length=292, Percent_Identity=28.7671232876712, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI223468566, Length=292, Percent_Identity=28.7671232876712, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI4827012, Length=246, Percent_Identity=29.6747967479675, Blast_Score=105, Evalue=9e-23, Organism=Homo sapiens, GI301601644, Length=124, Percent_Identity=40.3225806451613, Blast_Score=92, Evalue=8e-19, Organism=Homo sapiens, GI262359914, Length=374, Percent_Identity=24.331550802139, Blast_Score=82, Evalue=7e-16, Organism=Escherichia coli, GI1789947, Length=432, Percent_Identity=28.7037037037037, Blast_Score=172, Evalue=3e-44, Organism=Escherichia coli, GI1790514, Length=421, Percent_Identity=29.4536817102138, Blast_Score=169, Evalue=4e-43, Organism=Escherichia coli, GI1788024, Length=412, Percent_Identity=30.5825242718447, Blast_Score=164, Evalue=7e-42, Organism=Escherichia coli, GI1789473, Length=394, Percent_Identity=24.3654822335025, Blast_Score=86, Evalue=4e-18, Organism=Caenorhabditis elegans, GI71983099, Length=451, Percent_Identity=26.8292682926829, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17537407, Length=429, Percent_Identity=28.4382284382284, Blast_Score=142, Evalue=5e-34, Organism=Caenorhabditis elegans, GI71983106, Length=435, Percent_Identity=27.3563218390805, Blast_Score=141, Evalue=7e-34, Organism=Caenorhabditis elegans, GI193206505, Length=422, Percent_Identity=27.7251184834123, Blast_Score=127, Evalue=8e-30, Organism=Caenorhabditis elegans, GI71996953, Length=442, Percent_Identity=24.2081447963801, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI193206654, Length=454, Percent_Identity=24.6696035242291, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17541374, Length=401, Percent_Identity=23.6907730673317, Blast_Score=98, Evalue=9e-21, Organism=Drosophila melanogaster, GI24583025, Length=429, Percent_Identity=24.4755244755245, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI17137668, Length=429, Percent_Identity=24.4755244755245, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI24583023, Length=429, Percent_Identity=24.4755244755245, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI281360483, Length=478, Percent_Identity=25.1046025104602, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI17137666, Length=478, Percent_Identity=25.1046025104602, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI281360481, Length=478, Percent_Identity=25.1046025104602, Blast_Score=97, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 46835; Mature: 46835
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVAAWLRIPFWQRVVAGFVLGALVGWAMGPAADVWFGPLGDLYVTLIKMIAIPLVFFA CHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHH VINAISSLHGQKSVAALGGRTFLWFVITAALAVAVGLAVGTIMQPGAGHFSLSVDSGWKP HHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC RDVPSPVQVLLDVVPSNPFYALTGIGTKTNAAGETVLAAGRGSILPVIFFAALLGFAMVK CCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHH LGERVAEARKLTGQMSDIMIQVTRFVLEMTPLGTFGLIAGLVGSYGFSKLLPFGNFVLAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHCCCHHHHHHH YVACAIHIVVVYSSLLLAHGLNPWKFFRGAAPGMQVAFVSSSSFAAMPVAMRSITHNLGV HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCC SKDYAAFAVPLGASIKMDGCGAIFPALCAVFIAQYTGVPLTANQYFVVLIASVLGSFGTA CCCCHHEEECCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC GVPGTAVIMATVVLSAANLPLEVIGYLYAIDRILDMMRTMTNVTGQMLVPVLVAKQTGLL CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH DKSIYESASTNVGLEEPPADSAKPLR HHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKLVAAWLRIPFWQRVVAGFVLGALVGWAMGPAADVWFGPLGDLYVTLIKMIAIPLVFFA CHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHH VINAISSLHGQKSVAALGGRTFLWFVITAALAVAVGLAVGTIMQPGAGHFSLSVDSGWKP HHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC RDVPSPVQVLLDVVPSNPFYALTGIGTKTNAAGETVLAAGRGSILPVIFFAALLGFAMVK CCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHH LGERVAEARKLTGQMSDIMIQVTRFVLEMTPLGTFGLIAGLVGSYGFSKLLPFGNFVLAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHCCCHHHHHHH YVACAIHIVVVYSSLLLAHGLNPWKFFRGAAPGMQVAFVSSSSFAAMPVAMRSITHNLGV HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCC SKDYAAFAVPLGASIKMDGCGAIFPALCAVFIAQYTGVPLTANQYFVVLIASVLGSFGTA CCCCHHEEECCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC GVPGTAVIMATVVLSAANLPLEVIGYLYAIDRILDMMRTMTNVTGQMLVPVLVAKQTGLL CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH DKSIYESASTNVGLEEPPADSAKPLR HHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: orotate [Periplasm]; fumarate [Periplasm]; malate [Periplasm]; Na (I) [Periplasm]; succinate [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + orotate [Periplasm] = Na (I) [Cytoplasm] + orotate [Cytoplasm] Na (I) [Periplasm] + fumarate [Periplasm] = Na (I) [Cytoplasm] + fumarate [Cytoplasm] Na (I) [Periplasm] + malate [Periplasm] = Na (I) [Cytoplasm] + malate [Cytoplasm] Na
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA