| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is gor [H]
Identifier: 21243477
GI number: 21243477
Start: 3221604
End: 3222974
Strand: Reverse
Name: gor [H]
Synonym: XAC2750
Alternate gene names: 21243477
Gene position: 3222974-3221604 (Counterclockwise)
Preceding gene: 21243478
Following gene: 21243476
Centisome position: 62.27
GC content: 64.55
Gene sequence:
>1371_bases ATGAGTGCGCGTTACGACTACGATGTGGTGATTCTGGGCGGCGGGTCCGGCGGCCTCGCGGCGGGATTTCGCGCGGCAAA ACATGGCGCGCGCGTGGCGATCATGGAGCCCGACGAATTGGGCGGCACCTGCGTCAATCTCGGTTGCGTGCCGAAGAAGG CGATGTGGCTGGCCGCCGATCTGGCCGGCAAGATCGAGTTGGCCAGCGCCTTGGGATTCGATGTGCCGCGCCCGACGTTG GTCTGGCAGGAGCTGGTCACGCATCGGCAGGGGTACATCGCCAACATCCACGCCAGCTATCGACGCCGCCTCAACGAAGA TGGCGTGGTCTTGATCCCGCAGCGCGGCGTATTGCAGGACCGCCATACCGTCATGGGCAGCGACGGCGTGCCGGTCACCG CCGGGCACATCGTGATCGCCACTGGCGCGCACGCGTTACGCCCGGACGTGGAGGGCGCAGAGCATGGCGAGGTCTCCGAC GATTTCTTCAATCTCTGCCATGCGCCCGAGCAGGTCGCGATTATCGGCGGCGGCTATATCGCGGTGGAAATCGCCGGGCT GCTGCAGGCCTTAGGGAGCCGCGTGCATCTATTCGTGCAGGGCGAGCGCTTGCTGGAACGCTTCGATGCGGAACTGACCT TGCAGTTGGCCGACAACCTGCGCCATCTGGGCGTGCGGCTGCACTTCGGTTTCACCACCACCGCATTGGAGCGCGATATG CACGGTGCGCTGCGCGTGCATGGGCATTCCGTACATCCGCGCGAGCAGGGCAACGACGTCTTCGACAAGGTGTTTTTCGC GGTGGGCCGCCGCGCCAATACCGCAGGGCTGGGTCTGGACACCGTGGGTGTTGCGCTTGGCGACAAGGGCGAAGTGGTGG TGGACGACAGGCAGACCACCAACGTGCCGAATATTCACGCAATCGGCGATGTGGGCGGCAAGGTCGGACTGACGCCGGTG GCGATTGCGGCGGGGCGCAAGCTGATGGACCGCCTGTTCGGTCACCAACCGGATGCGCGCATGGATTACGAAAACGTGCC CAGCGTGGTGTTTTCGCACCCGCCGCTTGGCAACGTCGGGCTCACCGAAGAACAGGCACGTGCGCGCTACAACGGGGCGG TGCGCGTGTACCGCAGCAATTTCCGCCCGATGCTGCACGCACTGGCGGACGCGCCGCAGCGCAGCCTGTTCAAGCTGGTG TGCGTGGGCGAAGAAGAACGTGTGGTCGGCGTGCATCTGCTGGGTGAGAGCGCCGACGAAATGCTGCAAGGCTTTGCGGT GGCGGTGAAGATGGGCGCGACCAAGCGCGACTTCGACGAAACCGTGGCGATTCATCCCACCTCGTCTGAAGAGATTGTGT TGATGCACTGA
Upstream 100 bases:
>100_bases GCATCAGCATGAGCACTGCAAGCGGACAATTGATGGCCGACCTGATCACGGGCCGCGCACCTGCGCTGGACCCGCATCCT TACCGGGCGGAGCGTTTCGC
Downstream 100 bases:
>100_bases GGCCGAGGTGGCCGGAGGTGGCAGGTTAGCGGGCTGGTGACGCTCTGATCGGTGCACCATCGCAGGTCGCAAAAAATGGC AGCAGCAGCGGACCCTGCCG
Product: reductase
Products: NA
Alternate protein names: GR; GRase [H]
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MSARYDYDVVILGGGSGGLAAGFRAAKHGARVAIMEPDELGGTCVNLGCVPKKAMWLAADLAGKIELASALGFDVPRPTL VWQELVTHRQGYIANIHASYRRRLNEDGVVLIPQRGVLQDRHTVMGSDGVPVTAGHIVIATGAHALRPDVEGAEHGEVSD DFFNLCHAPEQVAIIGGGYIAVEIAGLLQALGSRVHLFVQGERLLERFDAELTLQLADNLRHLGVRLHFGFTTTALERDM HGALRVHGHSVHPREQGNDVFDKVFFAVGRRANTAGLGLDTVGVALGDKGEVVVDDRQTTNVPNIHAIGDVGGKVGLTPV AIAAGRKLMDRLFGHQPDARMDYENVPSVVFSHPPLGNVGLTEEQARARYNGAVRVYRSNFRPMLHALADAPQRSLFKLV CVGEEERVVGVHLLGESADEMLQGFAVAVKMGATKRDFDETVAIHPTSSEEIVLMH
Sequences:
>Translated_456_residues MSARYDYDVVILGGGSGGLAAGFRAAKHGARVAIMEPDELGGTCVNLGCVPKKAMWLAADLAGKIELASALGFDVPRPTL VWQELVTHRQGYIANIHASYRRRLNEDGVVLIPQRGVLQDRHTVMGSDGVPVTAGHIVIATGAHALRPDVEGAEHGEVSD DFFNLCHAPEQVAIIGGGYIAVEIAGLLQALGSRVHLFVQGERLLERFDAELTLQLADNLRHLGVRLHFGFTTTALERDM HGALRVHGHSVHPREQGNDVFDKVFFAVGRRANTAGLGLDTVGVALGDKGEVVVDDRQTTNVPNIHAIGDVGGKVGLTPV AIAAGRKLMDRLFGHQPDARMDYENVPSVVFSHPPLGNVGLTEEQARARYNGAVRVYRSNFRPMLHALADAPQRSLFKLV CVGEEERVVGVHLLGESADEMLQGFAVAVKMGATKRDFDETVAIHPTSSEEIVLMH >Mature_455_residues SARYDYDVVILGGGSGGLAAGFRAAKHGARVAIMEPDELGGTCVNLGCVPKKAMWLAADLAGKIELASALGFDVPRPTLV WQELVTHRQGYIANIHASYRRRLNEDGVVLIPQRGVLQDRHTVMGSDGVPVTAGHIVIATGAHALRPDVEGAEHGEVSDD FFNLCHAPEQVAIIGGGYIAVEIAGLLQALGSRVHLFVQGERLLERFDAELTLQLADNLRHLGVRLHFGFTTTALERDMH GALRVHGHSVHPREQGNDVFDKVFFAVGRRANTAGLGLDTVGVALGDKGEVVVDDRQTTNVPNIHAIGDVGGKVGLTPVA IAAGRKLMDRLFGHQPDARMDYENVPSVVFSHPPLGNVGLTEEQARARYNGAVRVYRSNFRPMLHALADAPQRSLFKLVC VGEEERVVGVHLLGESADEMLQGFAVAVKMGATKRDFDETVAIHPTSSEEIVLMH
Specific function: Maintains high levels of reduced glutathione in the cytosol [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI50301238, Length=466, Percent_Identity=44.4206008583691, Blast_Score=355, Evalue=4e-98, Organism=Homo sapiens, GI22035672, Length=472, Percent_Identity=37.9237288135593, Blast_Score=255, Evalue=6e-68, Organism=Homo sapiens, GI148277065, Length=473, Percent_Identity=35.7293868921776, Blast_Score=236, Evalue=5e-62, Organism=Homo sapiens, GI33519430, Length=473, Percent_Identity=35.7293868921776, Blast_Score=236, Evalue=5e-62, Organism=Homo sapiens, GI33519428, Length=473, Percent_Identity=35.7293868921776, Blast_Score=236, Evalue=5e-62, Organism=Homo sapiens, GI33519426, Length=473, Percent_Identity=35.7293868921776, Blast_Score=236, Evalue=5e-62, Organism=Homo sapiens, GI148277071, Length=473, Percent_Identity=35.7293868921776, Blast_Score=235, Evalue=5e-62, Organism=Homo sapiens, GI291045266, Length=469, Percent_Identity=34.5415778251599, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI291045268, Length=468, Percent_Identity=31.6239316239316, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI91199540, Length=456, Percent_Identity=28.0701754385965, Blast_Score=152, Evalue=7e-37, Organism=Escherichia coli, GI1789915, Length=434, Percent_Identity=45.3917050691244, Blast_Score=375, Evalue=1e-105, Organism=Escherichia coli, GI1786307, Length=471, Percent_Identity=28.0254777070064, Blast_Score=144, Evalue=2e-35, Organism=Escherichia coli, GI87081717, Length=461, Percent_Identity=28.1995661605206, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI87082354, Length=463, Percent_Identity=27.645788336933, Blast_Score=132, Evalue=4e-32, Organism=Caenorhabditis elegans, GI71983419, Length=461, Percent_Identity=42.2993492407809, Blast_Score=307, Evalue=6e-84, Organism=Caenorhabditis elegans, GI71983429, Length=461, Percent_Identity=42.2993492407809, Blast_Score=307, Evalue=7e-84, Organism=Caenorhabditis elegans, GI17557007, Length=477, Percent_Identity=31.6561844863732, Blast_Score=221, Evalue=9e-58, Organism=Caenorhabditis elegans, GI71982272, Length=479, Percent_Identity=32.3590814196242, Blast_Score=218, Evalue=7e-57, Organism=Caenorhabditis elegans, GI32565766, Length=471, Percent_Identity=28.2377919320594, Blast_Score=144, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6325166, Length=474, Percent_Identity=40.7172995780591, Blast_Score=350, Evalue=2e-97, Organism=Saccharomyces cerevisiae, GI6321091, Length=469, Percent_Identity=27.2921108742004, Blast_Score=135, Evalue=9e-33, Organism=Saccharomyces cerevisiae, GI6325240, Length=463, Percent_Identity=25.4859611231102, Blast_Score=123, Evalue=7e-29, Organism=Drosophila melanogaster, GI24640553, Length=472, Percent_Identity=36.228813559322, Blast_Score=252, Evalue=3e-67, Organism=Drosophila melanogaster, GI24640551, Length=475, Percent_Identity=36, Blast_Score=252, Evalue=5e-67, Organism=Drosophila melanogaster, GI24640549, Length=472, Percent_Identity=36.228813559322, Blast_Score=251, Evalue=5e-67, Organism=Drosophila melanogaster, GI17737741, Length=475, Percent_Identity=35.3684210526316, Blast_Score=242, Evalue=5e-64, Organism=Drosophila melanogaster, GI21358499, Length=468, Percent_Identity=26.9230769230769, Blast_Score=145, Evalue=7e-35,
Paralogues:
None
Copy number: 650 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR006322 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.7 [H]
Molecular weight: Translated: 49118; Mature: 48987
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARYDYDVVILGGGSGGLAAGFRAAKHGARVAIMEPDELGGTCVNLGCVPKKAMWLAAD CCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCHHCCCEEEEECCCCCHHHEEEHH LAGKIELASALGFDVPRPTLVWQELVTHRQGYIANIHASYRRRLNEDGVVLIPQRGVLQD HCCCEEEHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEHHHHHHCCCCCEEEECCCCCCCC RHTVMGSDGVPVTAGHIVIATGAHALRPDVEGAEHGEVSDDFFNLCHAPEQVAIIGGGYI CCEEECCCCCCEEECCEEEEECCHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCEE AVEIAGLLQALGSRVHLFVQGERLLERFDAELTLQLADNLRHLGVRLHFGFTTTALERDM EHHHHHHHHHCCCEEEEEEECHHHHHHHCCCEEEHHHHCHHEEEEEEEECCCHHHHHHHC HGALRVHGHSVHPREQGNDVFDKVFFAVGRRANTAGLGLDTVGVALGDKGEVVVDDRQTT CCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHEEEEECCCCCEEECCCCCC NVPNIHAIGDVGGKVGLTPVAIAAGRKLMDRLFGHQPDARMDYENVPSVVFSHPPLGNVG CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEECCCCCCCCC LTEEQARARYNGAVRVYRSNFRPMLHALADAPQRSLFKLVCVGEEERVVGVHLLGESADE CCHHHHHHHHCCEEEEEECCCHHHHHHHHCCCHHCEEEEEEECCCCCEEEEEEECCCHHH MLQGFAVAVKMGATKRDFDETVAIHPTSSEEIVLMH HHHHHEEEEEECCCCCCCCCEEEECCCCCCCEEEEC >Mature Secondary Structure SARYDYDVVILGGGSGGLAAGFRAAKHGARVAIMEPDELGGTCVNLGCVPKKAMWLAAD CCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCHHCCCEEEEECCCCCHHHEEEHH LAGKIELASALGFDVPRPTLVWQELVTHRQGYIANIHASYRRRLNEDGVVLIPQRGVLQD HCCCEEEHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEHHHHHHCCCCCEEEECCCCCCCC RHTVMGSDGVPVTAGHIVIATGAHALRPDVEGAEHGEVSDDFFNLCHAPEQVAIIGGGYI CCEEECCCCCCEEECCEEEEECCHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCEE AVEIAGLLQALGSRVHLFVQGERLLERFDAELTLQLADNLRHLGVRLHFGFTTTALERDM EHHHHHHHHHCCCEEEEEEECHHHHHHHCCCEEEHHHHCHHEEEEEEEECCCHHHHHHHC HGALRVHGHSVHPREQGNDVFDKVFFAVGRRANTAGLGLDTVGVALGDKGEVVVDDRQTT CCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHEEEEECCCCCEEECCCCCC NVPNIHAIGDVGGKVGLTPVAIAAGRKLMDRLFGHQPDARMDYENVPSVVFSHPPLGNVG CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEECCCCCCCCC LTEEQARARYNGAVRVYRSNFRPMLHALADAPQRSLFKLVCVGEEERVVGVHLLGESADE CCHHHHHHHHCCEEEEEECCCHHHHHHHHCCCHHCEEEEEEECCCCCEEEEEEECCCHHH MLQGFAVAVKMGATKRDFDETVAIHPTSSEEIVLMH HHHHHEEEEEECCCCCCCCCEEEECCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8525054 [H]