| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243437
Identifier: 21243437
GI number: 21243437
Start: 3168435
End: 3169358
Strand: Reverse
Name: 21243437
Synonym: XAC2710
Alternate gene names: NA
Gene position: 3169358-3168435 (Counterclockwise)
Preceding gene: 77748668
Following gene: 21243436
Centisome position: 61.24
GC content: 66.23
Gene sequence:
>924_bases GTGCATGCGCCAACTCGGCATGACCACGCCAGCACATGCAGGTGTGCAGCGATGAGCGGGCATCTGCGTGTCGCGCTGCT TGCTGCTGCGGTGGCCGGGGTGTTCGCGCCGCTGCATGCCCTGGCCGGCGACGGGCGCCTGCTCGCCACCGGCGGCGTAT CGATGATCGAAGGCAGTAGTGGCGGCGGCATCGTGCCGTGGGCCACCTTGTCTGGGTACGGCACGCGCGACGAGCTTGGC ACCGTCGCGTTCGCAACCCACGTCGACAGCGGCGATTACCGTCTCGACGTGCAGGGCGCCGCGCTCACGGTTGGCAACCG GCTGGAGCTGTCGCTTGCCCGCCAGCGTCTGGATCTGGGCACTCTGCAGGACCGGCTCGGCTTGCCGTGGAATGCGCTTG GCCAGGACGTGTTCGGCGCCAAGGTGCGCTTGGCCGGCGATCTTGTGTACGGAAATGCGCCGCAAGTCAGCTTGGGCGTG CAATACAAACGCCTGCGCAACGGCACCTTGCCATTGGCGATCGGTGCGCGCGACGACCACGGCACCGACATCTACCTCAG CGCGAGCCGCTTGTTGCTGCAGGGCGCCGCGGGATATCAGCTGCTGCTCAACGGCACCTTGCGCGCTACCCGCGCCAACC AGGCCGGTTTGCTCGGCTTTGGCGGCGATCGCCGCAACAGCTATCGTCTGGTGCCCGAGGTCAGTGCTGCAGTGGTGCTG TCGCCGTCCTGGGCGGTGGGTGTGGAATATCGCGACAAACCCAATAACCTCGGTTTCGCGCGCGAGCAAGCGTGGGCGGA TGCATTCGTCGCCTGGTTCCCCAATAAGCATGTTTCGTTGACCGCCGCCTGGGCCGATCTTGGCGATATCGCCACGCTTG CCGATCAGCGCGGCCCTTATCTCTCGTTGCAGGTGGCGTTCTGA
Upstream 100 bases:
>100_bases AAAACACCGCCGCCCTCGCGCTGCTGCGCGGCTACGGCTGCGACATGGTGCAGGGCTATCTGTATTCGCCACCGCTGGAA GAAGCGCCGCTGGTGGCCTG
Downstream 100 bases:
>100_bases TGAACCGATGGCTGCGCTGGTCGTTGCTCTGCATGCTGGGCCTGACGAGCGCCTGCGCCAGCACGCAGTCGCGGCAGACG CTGTACGACGAACTTGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MHAPTRHDHASTCRCAAMSGHLRVALLAAAVAGVFAPLHALAGDGRLLATGGVSMIEGSSGGGIVPWATLSGYGTRDELG TVAFATHVDSGDYRLDVQGAALTVGNRLELSLARQRLDLGTLQDRLGLPWNALGQDVFGAKVRLAGDLVYGNAPQVSLGV QYKRLRNGTLPLAIGARDDHGTDIYLSASRLLLQGAAGYQLLLNGTLRATRANQAGLLGFGGDRRNSYRLVPEVSAAVVL SPSWAVGVEYRDKPNNLGFAREQAWADAFVAWFPNKHVSLTAAWADLGDIATLADQRGPYLSLQVAF
Sequences:
>Translated_307_residues MHAPTRHDHASTCRCAAMSGHLRVALLAAAVAGVFAPLHALAGDGRLLATGGVSMIEGSSGGGIVPWATLSGYGTRDELG TVAFATHVDSGDYRLDVQGAALTVGNRLELSLARQRLDLGTLQDRLGLPWNALGQDVFGAKVRLAGDLVYGNAPQVSLGV QYKRLRNGTLPLAIGARDDHGTDIYLSASRLLLQGAAGYQLLLNGTLRATRANQAGLLGFGGDRRNSYRLVPEVSAAVVL SPSWAVGVEYRDKPNNLGFAREQAWADAFVAWFPNKHVSLTAAWADLGDIATLADQRGPYLSLQVAF >Mature_307_residues MHAPTRHDHASTCRCAAMSGHLRVALLAAAVAGVFAPLHALAGDGRLLATGGVSMIEGSSGGGIVPWATLSGYGTRDELG TVAFATHVDSGDYRLDVQGAALTVGNRLELSLARQRLDLGTLQDRLGLPWNALGQDVFGAKVRLAGDLVYGNAPQVSLGV QYKRLRNGTLPLAIGARDDHGTDIYLSASRLLLQGAAGYQLLLNGTLRATRANQAGLLGFGGDRRNSYRLVPEVSAAVVL SPSWAVGVEYRDKPNNLGFAREQAWADAFVAWFPNKHVSLTAAWADLGDIATLADQRGPYLSLQVAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32423; Mature: 32423
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAPTRHDHASTCRCAAMSGHLRVALLAAAVAGVFAPLHALAGDGRLLATGGVSMIEGSS CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCC GGGIVPWATLSGYGTRDELGTVAFATHVDSGDYRLDVQGAALTVGNRLELSLARQRLDLG CCCEEEEEEECCCCCHHHCCEEEEEEEECCCCEEEEECCEEEEECCEEEHHHHHHHHCHH TLQDRLGLPWNALGQDVFGAKVRLAGDLVYGNAPQVSLGVQYKRLRNGTLPLAIGARDDH HHHHHHCCCHHHHCCCCCCCEEEEEEEEEECCCCCEEECEEEHHHCCCCCEEEEECCCCC GTDIYLSASRLLLQGAAGYQLLLNGTLRATRANQAGLLGFGGDRRNSYRLVPEVSAAVVL CCEEEEECCEEEEECCCCEEEEEECEEEEECCCCCCEEECCCCCCCCEEEEECCCEEEEE SPSWAVGVEYRDKPNNLGFAREQAWADAFVAWFPNKHVSLTAAWADLGDIATLADQRGPY CCCEEEEEEECCCCCCCCCHHHHHHHHEEEEECCCCCEEEEEECCCCCHHHHHHHCCCCE LSLQVAF EEEEEEC >Mature Secondary Structure MHAPTRHDHASTCRCAAMSGHLRVALLAAAVAGVFAPLHALAGDGRLLATGGVSMIEGSS CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCC GGGIVPWATLSGYGTRDELGTVAFATHVDSGDYRLDVQGAALTVGNRLELSLARQRLDLG CCCEEEEEEECCCCCHHHCCEEEEEEEECCCCEEEEECCEEEEECCEEEHHHHHHHHCHH TLQDRLGLPWNALGQDVFGAKVRLAGDLVYGNAPQVSLGVQYKRLRNGTLPLAIGARDDH HHHHHHCCCHHHHCCCCCCCEEEEEEEEEECCCCCEEECEEEHHHCCCCCEEEEECCCCC GTDIYLSASRLLLQGAAGYQLLLNGTLRATRANQAGLLGFGGDRRNSYRLVPEVSAAVVL CCEEEEECCEEEEECCCCEEEEEECEEEEECCCCCCEEECCCCCCCCEEEEECCCEEEEE SPSWAVGVEYRDKPNNLGFAREQAWADAFVAWFPNKHVSLTAAWADLGDIATLADQRGPY CCCEEEEEEECCCCCCCCCHHHHHHHHEEEEECCCCCEEEEEECCCCCHHHHHHHCCCCE LSLQVAF EEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA