| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is purE [H]
Identifier: 21243408
GI number: 21243408
Start: 3137904
End: 3138407
Strand: Reverse
Name: purE [H]
Synonym: XAC2679
Alternate gene names: 21243408
Gene position: 3138407-3137904 (Counterclockwise)
Preceding gene: 21243412
Following gene: 21243407
Centisome position: 60.64
GC content: 67.86
Gene sequence:
>504_bases ATGACCTCCAACCACTCCGCGCCGCTGGTCGGCATCGTGATGGGTTCCCGTTCGGATTGGGAGACCATGCAACACGCAGC TCAGAAGCTCGACGCGCTGGGCGTGCCGTACGAAGTCAAGGTGGTCTCGGCGCACCGCACCCCGGACGTCTTGTTCGCCT ACGCCGAACAGGCGGGCGCCCGTGGACTGCGCGCGATCATCGCCGGCGCCGGCGGCGCGGCGCATCTGCCGGGCATGCTG GCTGCCAAGACTGCAGTGCCGGTGCTTGGTGTGCCGGTGCAGTCCAAGGCGCTTAACGGCATGGATTCGCTGCTGTCGAT CGTGCAGATGCCGGCCGGCATTCCGGTGGCCACCTTCGCCATCGGCAATGCGGGTGCGGCCAATGCGGCGTTGTTTGCGG CGGCCATGCTGGCGCCGGAGCAGACGCAGATCGGTCAGGCGCTGGCGCAGTTCCGCGCCAAGCAGACCGACGATGTCATG GCCAGCGACGACCCGCGCCAATGA
Upstream 100 bases:
>100_bases GGTGTCGGGCGAGCACAGCAGGTCGAGCAATTTGCGATCCATCGAAGTCTTGTCTTGCGTGGAGATTGGCTAGAATACGT CTTTACCGCAGGGCAGGGCC
Downstream 100 bases:
>100_bases GCACGCTCGGCATTCTGGGTGGCGGCCAGCTGGCGCGCATGCTGGTACTTGCCGGTGCGCCGCTCGGCATACGCTTTGCG GTCTTCGATCCGGTAGCCGA
Product: phosphoribosylaminoimidazole carboxylase catalytic subunit
Products: NA
Alternate protein names: N5-CAIR mutase; 5-(carboxyamino)imidazole ribonucleotide mutase [H]
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTSNHSAPLVGIVMGSRSDWETMQHAAQKLDALGVPYEVKVVSAHRTPDVLFAYAEQAGARGLRAIIAGAGGAAHLPGML AAKTAVPVLGVPVQSKALNGMDSLLSIVQMPAGIPVATFAIGNAGAANAALFAAAMLAPEQTQIGQALAQFRAKQTDDVM ASDDPRQ
Sequences:
>Translated_167_residues MTSNHSAPLVGIVMGSRSDWETMQHAAQKLDALGVPYEVKVVSAHRTPDVLFAYAEQAGARGLRAIIAGAGGAAHLPGML AAKTAVPVLGVPVQSKALNGMDSLLSIVQMPAGIPVATFAIGNAGAANAALFAAAMLAPEQTQIGQALAQFRAKQTDDVM ASDDPRQ >Mature_166_residues TSNHSAPLVGIVMGSRSDWETMQHAAQKLDALGVPYEVKVVSAHRTPDVLFAYAEQAGARGLRAIIAGAGGAAHLPGMLA AKTAVPVLGVPVQSKALNGMDSLLSIVQMPAGIPVATFAIGNAGAANAALFAAAMLAPEQTQIGQALAQFRAKQTDDVMA SDDPRQ
Specific function: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) [H]
COG id: COG0041
COG function: function code F; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR carboxylase family [H]
Homologues:
Organism=Escherichia coli, GI1786734, Length=166, Percent_Identity=63.2530120481928, Blast_Score=176, Evalue=7e-46, Organism=Saccharomyces cerevisiae, GI6324702, Length=153, Percent_Identity=54.9019607843137, Blast_Score=158, Evalue=3e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: =5.4.99.18 [H]
Molecular weight: Translated: 17098; Mature: 16967
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNHSAPLVGIVMGSRSDWETMQHAAQKLDALGVPYEVKVVSAHRTPDVLFAYAEQAGA CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCC RGLRAIIAGAGGAAHLPGMLAAKTAVPVLGVPVQSKALNGMDSLLSIVQMPAGIPVATFA HHHHHHHCCCCCHHHCCCHHHHHHCCCEECCCCHHHHHCCHHHHHHHHHCCCCCCEEEEE IGNAGAANAALFAAAMLAPEQTQIGQALAQFRAKQTDDVMASDDPRQ CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TSNHSAPLVGIVMGSRSDWETMQHAAQKLDALGVPYEVKVVSAHRTPDVLFAYAEQAGA CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCC RGLRAIIAGAGGAAHLPGMLAAKTAVPVLGVPVQSKALNGMDSLLSIVQMPAGIPVATFA HHHHHHHCCCCCHHHCCCHHHHHHCCCEECCCCHHHHHCCHHHHHHHHHCCCCCCEEEEE IGNAGAANAALFAAAMLAPEQTQIGQALAQFRAKQTDDVMASDDPRQ CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8816818; 10984043 [H]