| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yhgN [H]
Identifier: 21243403
GI number: 21243403
Start: 3134265
End: 3134864
Strand: Reverse
Name: yhgN [H]
Synonym: XAC2674
Alternate gene names: 21243403
Gene position: 3134864-3134265 (Counterclockwise)
Preceding gene: 21243404
Following gene: 21243401
Centisome position: 60.57
GC content: 65.5
Gene sequence:
>600_bases ATGACCATTCTTTCCGCGGCGCTGCTGCTGTTCCTGATTCTCGACCCGCTGGGCAACATTCCAGTGTTTCTCAGCGTGCT CAAGCCGCTGCCGCCCAAGCGCCAGCGCTTCGTGCTTGCGCGTGAACTGCTGATCGCGCTGTGCGTGTTGATGGCGTTCC TGTGGGGCGGCAAGTACGCGCTGGAGCTGATGCACCTGCGGCAGGAATCGGTGGCCATTGCCGGCGGCATCGTGCTGTTT GTGATCGGCATCCGCATGATCTTCCCGCGGCCCGAGGGCCTGATGGGCGAAATCCCCGACGGCGAGCCCTTCATCGTGCC GCTGGCCATCCCGCTGGTGGCCGGCCCGTCCGGCATGGCCGCGGTGATGCTGATGGGCAGCAACGAGCCCACGCGGCTGT GGGACTGGAGCCTTGCGCTGATGATTGCCTGGATCGGCGCCTCGTCGATCCTGGCCGCCGCGCCGCTGTTGTACAAACTG CTCGGCCACCGCGCCCTGACGGCCATCGAGCGCCTGATGGGCATGCTGCTGGTCGCCATCTCGGTACAGATGTTCCTGGA CGGCCTGGGCACGTACTTCAAGCTGCCGGTGTCGATCTAG
Upstream 100 bases:
>100_bases ACAACGACGCGGTCGAGGCCGCACGTTACGCCCCTGCGTGCGTCGGCGTACTGTCAGCCGCGGGGGCGATGCATCGCGGT GCGATCTGGAGTCCGCCGGT
Downstream 100 bases:
>100_bases CGCAGCTCTCGGCGGCTTGCCGATTACCTCGGGGTATGGCCGCAATGTGCGCCGATGGGCTAGGTCTCAACCCGCACTGG CGTGGTTTACGTGCTCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MTILSAALLLFLILDPLGNIPVFLSVLKPLPPKRQRFVLARELLIALCVLMAFLWGGKYALELMHLRQESVAIAGGIVLF VIGIRMIFPRPEGLMGEIPDGEPFIVPLAIPLVAGPSGMAAVMLMGSNEPTRLWDWSLALMIAWIGASSILAAAPLLYKL LGHRALTAIERLMGMLLVAISVQMFLDGLGTYFKLPVSI
Sequences:
>Translated_199_residues MTILSAALLLFLILDPLGNIPVFLSVLKPLPPKRQRFVLARELLIALCVLMAFLWGGKYALELMHLRQESVAIAGGIVLF VIGIRMIFPRPEGLMGEIPDGEPFIVPLAIPLVAGPSGMAAVMLMGSNEPTRLWDWSLALMIAWIGASSILAAAPLLYKL LGHRALTAIERLMGMLLVAISVQMFLDGLGTYFKLPVSI >Mature_198_residues TILSAALLLFLILDPLGNIPVFLSVLKPLPPKRQRFVLARELLIALCVLMAFLWGGKYALELMHLRQESVAIAGGIVLFV IGIRMIFPRPEGLMGEIPDGEPFIVPLAIPLVAGPSGMAAVMLMGSNEPTRLWDWSLALMIAWIGASSILAAAPLLYKLL GHRALTAIERLMGMLLVAISVQMFLDGLGTYFKLPVSI
Specific function: Unknown
COG id: COG2095
COG function: function code U; Multiple antibiotic transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0056 (marC) family [H]
Homologues:
Organism=Escherichia coli, GI1789842, Length=193, Percent_Identity=51.2953367875648, Blast_Score=189, Evalue=1e-49, Organism=Escherichia coli, GI1787494, Length=198, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787809, Length=196, Percent_Identity=25.5102040816327, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002771 [H]
Pfam domain/function: PF01914 MarC [H]
EC number: NA
Molecular weight: Translated: 21615; Mature: 21484
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILSAALLLFLILDPLGNIPVFLSVLKPLPPKRQRFVLARELLIALCVLMAFLWGGKYA CHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH LELMHLRQESVAIAGGIVLFVIGIRMIFPRPEGLMGEIPDGEPFIVPLAIPLVAGPSGMA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCE AVMLMGSNEPTRLWDWSLALMIAWIGASSILAAAPLLYKLLGHRALTAIERLMGMLLVAI EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVQMFLDGLGTYFKLPVSI HHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TILSAALLLFLILDPLGNIPVFLSVLKPLPPKRQRFVLARELLIALCVLMAFLWGGKYA HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH LELMHLRQESVAIAGGIVLFVIGIRMIFPRPEGLMGEIPDGEPFIVPLAIPLVAGPSGMA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCE AVMLMGSNEPTRLWDWSLALMIAWIGASSILAAAPLLYKLLGHRALTAIERLMGMLLVAI EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVQMFLDGLGTYFKLPVSI HHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]