| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243388
Identifier: 21243388
GI number: 21243388
Start: 3118586
End: 3119260
Strand: Direct
Name: 21243388
Synonym: XAC2659
Alternate gene names: NA
Gene position: 3118586-3119260 (Clockwise)
Preceding gene: 21243387
Following gene: 21243389
Centisome position: 60.26
GC content: 60.15
Gene sequence:
>675_bases ATGGCGACGGGTTACCGCACGGGCGCAGGACTCGACTTCGACGACATCTTTGACCTCTACGTGCAAGGCGAAATTGGCAG CGTGACGGGCTATCGTTCCAGTGATGGCAATGATCTGCATCGGCGGTATGCACCCTTGGCGTTTGGCAGCAGGGCGGCGG ACGTCGGCTACCGCGACAATGCCGGCTCCGATCTCAGCAACAAATGGTCGAGAAAAGGCAGTGCCGTCTATTCGCTCTCC AACAACGGCGTGCACTACTACGCTGGCAGCCAAGCAGTTACGTCCGAGGGCGGCAGCCAGACGGCAAGCGTTTCGTTCTC GATTCGAGCCAATGGAACCTGGGCGCTCGGCCTCTCCGGGAAAGGGGTGAGCGGCTCGCCAACTTCCGGAACATGGCTGC CCAACGGTCAGCCGGCGAGCAACTATTCTGTGCAGCTGGATTTTTCCGTCTCATGGCTGCGCGGCAATCGCAACGGGACA TCGTCCAACTCGGCTGCGAATTACTCGCCGATGACCGGCGACTATGCCTGCAGCATCACATCCAGAGCGCTCTCGGGATC GGGCAACGAGTGCTATGGGGAAGGCAAGCTGACGATTCGGATCCGCAACAATGCCACTGGCTCTGTCTCGACCACCGCTA TTTCACTGGTCGCAGAAGCGGTAGGCTTCGCCTGA
Upstream 100 bases:
>100_bases CAATGTCAGCGCTGCCGGCGTGGTCGTGTATTTGAAGGCCGTCTATGACCAACTCCACAACGAGGCTGCAGCAGTCCAGA CGCCGGCGGTCGCCTAATTC
Downstream 100 bases:
>100_bases CGCTTGGTCCAGCGCATACTGGTTCGTATAGCGCCGGACGTCACCTTCGCTCGATTGGATGCACCCGACTGCGCTCCGTG TAGCCAACCGTTATACGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MATGYRTGAGLDFDDIFDLYVQGEIGSVTGYRSSDGNDLHRRYAPLAFGSRAADVGYRDNAGSDLSNKWSRKGSAVYSLS NNGVHYYAGSQAVTSEGGSQTASVSFSIRANGTWALGLSGKGVSGSPTSGTWLPNGQPASNYSVQLDFSVSWLRGNRNGT SSNSAANYSPMTGDYACSITSRALSGSGNECYGEGKLTIRIRNNATGSVSTTAISLVAEAVGFA
Sequences:
>Translated_224_residues MATGYRTGAGLDFDDIFDLYVQGEIGSVTGYRSSDGNDLHRRYAPLAFGSRAADVGYRDNAGSDLSNKWSRKGSAVYSLS NNGVHYYAGSQAVTSEGGSQTASVSFSIRANGTWALGLSGKGVSGSPTSGTWLPNGQPASNYSVQLDFSVSWLRGNRNGT SSNSAANYSPMTGDYACSITSRALSGSGNECYGEGKLTIRIRNNATGSVSTTAISLVAEAVGFA >Mature_223_residues ATGYRTGAGLDFDDIFDLYVQGEIGSVTGYRSSDGNDLHRRYAPLAFGSRAADVGYRDNAGSDLSNKWSRKGSAVYSLSN NGVHYYAGSQAVTSEGGSQTASVSFSIRANGTWALGLSGKGVSGSPTSGTWLPNGQPASNYSVQLDFSVSWLRGNRNGTS SNSAANYSPMTGDYACSITSRALSGSGNECYGEGKLTIRIRNNATGSVSTTAISLVAEAVGFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23272; Mature: 23141
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATGYRTGAGLDFDDIFDLYVQGEIGSVTGYRSSDGNDLHRRYAPLAFGSRAADVGYRDN CCCCCCCCCCCCHHHEEEEEEECCCCCEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC AGSDLSNKWSRKGSAVYSLSNNGVHYYAGSQAVTSEGGSQTASVSFSIRANGTWALGLSG CCCCCHHHHCCCCCEEEEECCCCEEEEECCEEEECCCCCEEEEEEEEEEECCEEEEECCC KGVSGSPTSGTWLPNGQPASNYSVQLDFSVSWLRGNRNGTSSNSAANYSPMTGDYACSIT CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEE SRALSGSGNECYGEGKLTIRIRNNATGSVSTTAISLVAEAVGFA HHHHCCCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure ATGYRTGAGLDFDDIFDLYVQGEIGSVTGYRSSDGNDLHRRYAPLAFGSRAADVGYRDN CCCCCCCCCCCHHHEEEEEEECCCCCEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC AGSDLSNKWSRKGSAVYSLSNNGVHYYAGSQAVTSEGGSQTASVSFSIRANGTWALGLSG CCCCCHHHHCCCCCEEEEECCCCEEEEECCEEEECCCCCEEEEEEEEEEECCEEEEECCC KGVSGSPTSGTWLPNGQPASNYSVQLDFSVSWLRGNRNGTSSNSAANYSPMTGDYACSIT CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEE SRALSGSGNECYGEGKLTIRIRNNATGSVSTTAISLVAEAVGFA HHHHCCCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA