| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is R
Identifier: 21243381
GI number: 21243381
Start: 3113343
End: 3113762
Strand: Direct
Name: R
Synonym: XAC2652
Alternate gene names: NA
Gene position: 3113343-3113762 (Clockwise)
Preceding gene: 21243380
Following gene: 21243382
Centisome position: 60.15
GC content: 62.86
Gene sequence:
>420_bases ATGATCAAGCCCGCCAACCTGCGCGCGCATCTGGTCGCGGCGCTGCCGGATCTGGCGCGCGATGCCGACCGGCTGCTGGT GTTTATCGACGCAGGCAGCCTGATCAGCACATTCCAGCCAGGGCTCTCATTCGAGTACCAGTACACACTCAACCTGATTT TGACCGACTACGCAGGGCACCCGGATAGCGTGATGCTGCCGCTGCTGGAGTGGGTGCAGGTCAACCAGTCCGAGCTACTC TCCAACCCTGCGCGCCGTGGCGACATCGCCTTCGAGGCCGACATCCTCGCCAACGACGCAGTGGATCTGTCGATCAAGTT GCCGCTCACCGAACGCGTGGTCGTGACGGCGAAGGATGGCGGCGGCTACGACATCACCCATGCACCCGAGCCGCAGATCG ATCCCACATGGATGACCTGA
Upstream 100 bases:
>100_bases CCGGTACCGTCGCCGACAACTACACCAACTGCCACGCCACCGCCGCGCAGCTGAGCGCGCTACAGGACTGGGTCGACCTG CATGCACCGGAGCCGGCGTC
Downstream 100 bases:
>100_bases CCGCACTGGAGACCTGGGTCGCACCGCTGCTGGCACGCCTGCAGGAGAGCGAGCGGCGCAAGCTGGCCCGCAAGATCGGC ACCGCGTTGCGACGCTCGCA
Product: phage-related tail protein
Products: NA
Alternate protein names: Tail Completion Protein R; P2 Phage Tail Completion Protein R; Phage Tail Completion Protein R; Phage Tail Protein; Bacteriophage Tail Completion Protein R; Bacteriophage P2 Tail Completion Protein GPR; Phage-Related Tail Completion Protein; Tail Completion Protein; Bacteriophage Tail Completion Protein GpR-Like Protein; Phage-Related Tail Protein; Prophage Tail Completion Protein; Tail Completion-Like Protein; Bacteriophage Tail Completion-Like Protein; Phage Tail Completion Protein GpR; Phage Tail Completion R Family Protein; Bacteriophage P2 Tail Completion Protein GpR
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MIKPANLRAHLVAALPDLARDADRLLVFIDAGSLISTFQPGLSFEYQYTLNLILTDYAGHPDSVMLPLLEWVQVNQSELL SNPARRGDIAFEADILANDAVDLSIKLPLTERVVVTAKDGGGYDITHAPEPQIDPTWMT
Sequences:
>Translated_139_residues MIKPANLRAHLVAALPDLARDADRLLVFIDAGSLISTFQPGLSFEYQYTLNLILTDYAGHPDSVMLPLLEWVQVNQSELL SNPARRGDIAFEADILANDAVDLSIKLPLTERVVVTAKDGGGYDITHAPEPQIDPTWMT >Mature_139_residues MIKPANLRAHLVAALPDLARDADRLLVFIDAGSLISTFQPGLSFEYQYTLNLILTDYAGHPDSVMLPLLEWVQVNQSELL SNPARRGDIAFEADILANDAVDLSIKLPLTERVVVTAKDGGGYDITHAPEPQIDPTWMT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15270; Mature: 15270
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKPANLRAHLVAALPDLARDADRLLVFIDAGSLISTFQPGLSFEYQYTLNLILTDYAGH CCCCCCHHHHHHHHCCHHCCCCCEEEEEEECCCCHHHCCCCCCEEEEEEEEEEEEECCCC PDSVMLPLLEWVQVNQSELLSNPARRGDIAFEADILANDAVDLSIKLPLTERVVVTAKDG CCCHHHHHHHHHCCCHHHHHCCCCCCCCEEEEEEEECCCCEEEEEECCCCCEEEEEEECC GGYDITHAPEPQIDPTWMT CCEECCCCCCCCCCCCCCC >Mature Secondary Structure MIKPANLRAHLVAALPDLARDADRLLVFIDAGSLISTFQPGLSFEYQYTLNLILTDYAGH CCCCCCHHHHHHHHCCHHCCCCCEEEEEEECCCCHHHCCCCCCEEEEEEEEEEEEECCCC PDSVMLPLLEWVQVNQSELLSNPARRGDIAFEADILANDAVDLSIKLPLTERVVVTAKDG CCCHHHHHHHHHCCCHHHHHCCCCCCCCEEEEEEEECCCCEEEEEECCCCCEEEEEEECC GGYDITHAPEPQIDPTWMT CCEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA