| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is L
Identifier: 21243375
GI number: 21243375
Start: 3110915
End: 3111382
Strand: Direct
Name: L
Synonym: XAC2646
Alternate gene names: NA
Gene position: 3110915-3111382 (Clockwise)
Preceding gene: 21243374
Following gene: 21243376
Centisome position: 60.11
GC content: 67.52
Gene sequence:
>468_bases ATGAGCGGATTCACTGCCACCGGCAGCACCAGCGCCACGCCTGATGCGATCGCCAACGCACCGTTCTGGCCGGCGATCGC ACCGGCGAGTGTGCGGGCAAGCATGCGCCTGGATGGCACCATCACCGATGCGCGCCTGCGCCAGGCCATCGTCGCCGCCA TGTTGGCGGTCAACGATGAGCTCCAGACCTGGGCGCAGACACAGCAGGCTGCCGGCTGGGCTGCGTTGGCCGATGTACCA AGCACCACCGTCGACGGTCTCTCGCGCCGCGTACAGCTGTATTTGCGCGCCGTTGCGTGTGCCACCGCCGTCGAGGTGGC CGAGCGTTACCGCAGCTTCGACGCTACCGACAGCGCCAACCAGCGCGCCGATGACTTGTCACCCAGCATCACCGAGCTGC GCCGCGACCAGCGCTGGGCTGTGCGCGATCTTCAGAACCTGCCGCGCAGCACGGTGGAGCTCATCTGA
Upstream 100 bases:
>100_bases AACCGAGCGTCCCCGCAACCCTCGCCGGCTCGGGGCTGATCCACAGCACTCCATCGCTGCGGTGACGCCCCGACCACCGG CGATCTCTTCCGAGCCATCC
Downstream 100 bases:
>100_bases TGCGCGTGCACGCCATGCAAGGCGACACCGTCGACCTGCTGTGCTGGCGCCACCTGGGCAGCACGGCCGGCCTGGTCGAG CGCACCTATCTCCTCAATCC
Product: phage-related capsid completion protein
Products: NA
Alternate protein names: Head Completion/Stabilization Protein; Phage Head Completion; Capsid Completion Protein; Phage Head Completion Protein; Bacteriophage Protein; Fels-2 Prophage Protein; Phage Head Completion/Stabilization Protein; Bacteriophage Head Completion Protein L; Phage P2 Capsid Completion GpL-Like Protein; Phage-Related Capsid Completion Protein; Phage Head Completion Protein L; Phage-Related Head Completion/Stabilization Protein; Prophage Phage Head Completion Protein; Bacteriophage P2 GPL Capsid Protein; Phage Head Completion Protein GpL
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSGFTATGSTSATPDAIANAPFWPAIAPASVRASMRLDGTITDARLRQAIVAAMLAVNDELQTWAQTQQAAGWAALADVP STTVDGLSRRVQLYLRAVACATAVEVAERYRSFDATDSANQRADDLSPSITELRRDQRWAVRDLQNLPRSTVELI
Sequences:
>Translated_155_residues MSGFTATGSTSATPDAIANAPFWPAIAPASVRASMRLDGTITDARLRQAIVAAMLAVNDELQTWAQTQQAAGWAALADVP STTVDGLSRRVQLYLRAVACATAVEVAERYRSFDATDSANQRADDLSPSITELRRDQRWAVRDLQNLPRSTVELI >Mature_154_residues SGFTATGSTSATPDAIANAPFWPAIAPASVRASMRLDGTITDARLRQAIVAAMLAVNDELQTWAQTQQAAGWAALADVPS TTVDGLSRRVQLYLRAVACATAVEVAERYRSFDATDSANQRADDLSPSITELRRDQRWAVRDLQNLPRSTVELI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16734; Mature: 16603
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGFTATGSTSATPDAIANAPFWPAIAPASVRASMRLDGTITDARLRQAIVAAMLAVNDE CCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LQTWAQTQQAAGWAALADVPSTTVDGLSRRVQLYLRAVACATAVEVAERYRSFDATDSAN HHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC QRADDLSPSITELRRDQRWAVRDLQNLPRSTVELI CCHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCC >Mature Secondary Structure SGFTATGSTSATPDAIANAPFWPAIAPASVRASMRLDGTITDARLRQAIVAAMLAVNDE CCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LQTWAQTQQAAGWAALADVPSTTVDGLSRRVQLYLRAVACATAVEVAERYRSFDATDSAN HHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC QRADDLSPSITELRRDQRWAVRDLQNLPRSTVELI CCHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA