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The map label for this gene is int

Identifier: 21243357

GI number: 21243357

Start: 3093992

End: 3095233

Strand: Reverse

Name: int

Synonym: XAC2628

Alternate gene names: NA

Gene position: 3095233-3093992 (Counterclockwise)

Preceding gene: 21243358

Following gene: 21243355

Centisome position: 59.8

GC content: 63.53

Gene sequence:

>1242_bases
ATGGGACGCGGCAGAAAGCGCAAGTTCAATCCGGATATCCCCAGGCATATCGACCAAGACGCCCTCCCGAAAGGCGTCTA
CTGGGCAGATGGGCGCTGGTACATCATCGAACCGCACCCCGAGGGCGGTACCACGAGGAAACGCACCATTGCTTATGCGG
ATGCGAGGCTTTCCGACCTCCACGCAGCCAGAGAGGCATCCCGTGGTGCCGGCCTGGTCGGCTCCCTGCAGTACCTGGCC
AACGCGTTCAAGCTATCCACCGAGTACCGGGACCTTTCTCGCAGCACCCGCGATGACTACGATCGCCATGCCGAGGTGGC
TTGTGGCTACGTGCTGAAAGACGGCAGCCTGTTCGGGCGCCTGCTGGTAGACCGTCTGTCCGTTCCCCTGGTGCAGCGCC
TGGTCGAAGCGCTCGCGAAGGGGCGAGAAGCAAGCGCCGTCCAGCCGGCGCTGCTTGCGCGTCCGTCCACCGCCAACCAC
ACGCTGCGGTATCTGCATCGCCTGTTTGCCTGGGGCATACGCATCGGCCATTGCAAGACCAACCCGGCCAGCGGCGTGCG
TGGTGCGAAAGAGCGCGCGGATGCAAAGATGCCGGATCCGCAATCGTTCATGGCTGTGCTTGAGTTCGCCAAGTCACGCG
CTGCGTTACCGCTGCACGCGAAGGGATCGGTCCCGCCTTACATGCCGGCGGTGATGGTACTGGCCTACAACGCACGTCTG
CGCGGTGTTGAGGTAACCGACCTGACAGACGCGGACGCGCTACAGCAGGGAGTACGCTGTACGCGCCGTAAGGGTTCTCG
CGACAACATCACCGCGTGGAACGACGATCTGCGATGGGCATGGATCTGGCTGCGGGACTACCGTGCTCAGCGGATCCAGG
CGCATAGACGACCGGTTCCGCTGCGACCGGAACAGCGCGGCCTGTTGGTCACCCAGACCGGCACGCGCTTGGCGCGATCA
ACACTGAAGACGGCCTGGCAGCGCTTGATAACAGCAGCGATCGAGGCCGGCGTGATCGCGGAAGAGTCTCGCTTTACACT
CCATGGCCTCAAGCATCGGGGCATCACTGACACGCGCGGTACGCGGGCGCACAAGCAAGACGCTGCAGGGCATGTCACCT
CCCAGATGACGCACCGCTACGATCACGAGCTGCAGGTGATCGCGCCACCAGCGCTGCCTACCGATGACGCACTTGCAGGG
GCGTTGGCATTCGTTGACCTGGTCAAGCCATCAGACACGTGA

Upstream 100 bases:

>100_bases
ACGACGGAAGGGGCGGCATCTGGACAACCCTGGACGCGCTCAACGCTGCAGTGGGGCTGGCCCCGAAAGCCGCTGAGCCA
CATAACAAGGAGCTGATCTG

Downstream 100 bases:

>100_bases
GGGCGCGAATTTTCCCGGCAATTTTCCCGGCGCAACAAAAAAGGGCTTGCGATAAATCGCAAGCCCTTGATGTTTTTGGC
GCCCGAAGTTGGACTCGAAC

Product: phage-related integrase

Products: NA

Alternate protein names: Site-Specific Recombinase Phage Integrase Family; Phage Integrase; Integrase Family Protein; Phage Integrase Family Protein; Prophage; Integrase Prophage; Integrase Protein; Integrase; Phage Integrase Family Site Specific Recombinase

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MGRGRKRKFNPDIPRHIDQDALPKGVYWADGRWYIIEPHPEGGTTRKRTIAYADARLSDLHAAREASRGAGLVGSLQYLA
NAFKLSTEYRDLSRSTRDDYDRHAEVACGYVLKDGSLFGRLLVDRLSVPLVQRLVEALAKGREASAVQPALLARPSTANH
TLRYLHRLFAWGIRIGHCKTNPASGVRGAKERADAKMPDPQSFMAVLEFAKSRAALPLHAKGSVPPYMPAVMVLAYNARL
RGVEVTDLTDADALQQGVRCTRRKGSRDNITAWNDDLRWAWIWLRDYRAQRIQAHRRPVPLRPEQRGLLVTQTGTRLARS
TLKTAWQRLITAAIEAGVIAEESRFTLHGLKHRGITDTRGTRAHKQDAAGHVTSQMTHRYDHELQVIAPPALPTDDALAG
ALAFVDLVKPSDT

Sequences:

>Translated_413_residues
MGRGRKRKFNPDIPRHIDQDALPKGVYWADGRWYIIEPHPEGGTTRKRTIAYADARLSDLHAAREASRGAGLVGSLQYLA
NAFKLSTEYRDLSRSTRDDYDRHAEVACGYVLKDGSLFGRLLVDRLSVPLVQRLVEALAKGREASAVQPALLARPSTANH
TLRYLHRLFAWGIRIGHCKTNPASGVRGAKERADAKMPDPQSFMAVLEFAKSRAALPLHAKGSVPPYMPAVMVLAYNARL
RGVEVTDLTDADALQQGVRCTRRKGSRDNITAWNDDLRWAWIWLRDYRAQRIQAHRRPVPLRPEQRGLLVTQTGTRLARS
TLKTAWQRLITAAIEAGVIAEESRFTLHGLKHRGITDTRGTRAHKQDAAGHVTSQMTHRYDHELQVIAPPALPTDDALAG
ALAFVDLVKPSDT
>Mature_412_residues
GRGRKRKFNPDIPRHIDQDALPKGVYWADGRWYIIEPHPEGGTTRKRTIAYADARLSDLHAAREASRGAGLVGSLQYLAN
AFKLSTEYRDLSRSTRDDYDRHAEVACGYVLKDGSLFGRLLVDRLSVPLVQRLVEALAKGREASAVQPALLARPSTANHT
LRYLHRLFAWGIRIGHCKTNPASGVRGAKERADAKMPDPQSFMAVLEFAKSRAALPLHAKGSVPPYMPAVMVLAYNARLR
GVEVTDLTDADALQQGVRCTRRKGSRDNITAWNDDLRWAWIWLRDYRAQRIQAHRRPVPLRPEQRGLLVTQTGTRLARST
LKTAWQRLITAAIEAGVIAEESRFTLHGLKHRGITDTRGTRAHKQDAAGHVTSQMTHRYDHELQVIAPPALPTDDALAGA
LAFVDLVKPSDT

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46052; Mature: 45921

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRGRKRKFNPDIPRHIDQDALPKGVYWADGRWYIIEPHPEGGTTRKRTIAYADARLSDL
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCCCCCCEEEEEHHHHHHHH
HAAREASRGAGLVGSLQYLANAFKLSTEYRDLSRSTRDDYDRHAEVACGYVLKDGSLFGR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHH
LLVDRLSVPLVQRLVEALAKGREASAVQPALLARPSTANHTLRYLHRLFAWGIRIGHCKT
HHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCEEEECCCC
NPASGVRGAKERADAKMPDPQSFMAVLEFAKSRAALPLHAKGSVPPYMPAVMVLAYNARL
CCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHCCEE
RGVEVTDLTDADALQQGVRCTRRKGSRDNITAWNDDLRWAWIWLRDYRAQRIQAHRRPVP
CCEEEECCCCHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEEHHHHHHHHHHHHCCCCC
LRPEQRGLLVTQTGTRLARSTLKTAWQRLITAAIEAGVIAEESRFTLHGLKHRGITDTRG
CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHCCCCCCCCCC
TRAHKQDAAGHVTSQMTHRYDHELQVIAPPALPTDDALAGALAFVDLVKPSDT
CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GRGRKRKFNPDIPRHIDQDALPKGVYWADGRWYIIEPHPEGGTTRKRTIAYADARLSDL
CCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCCCCCCEEEEEHHHHHHHH
HAAREASRGAGLVGSLQYLANAFKLSTEYRDLSRSTRDDYDRHAEVACGYVLKDGSLFGR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHH
LLVDRLSVPLVQRLVEALAKGREASAVQPALLARPSTANHTLRYLHRLFAWGIRIGHCKT
HHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCEEEECCCC
NPASGVRGAKERADAKMPDPQSFMAVLEFAKSRAALPLHAKGSVPPYMPAVMVLAYNARL
CCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHCCEE
RGVEVTDLTDADALQQGVRCTRRKGSRDNITAWNDDLRWAWIWLRDYRAQRIQAHRRPVP
CCEEEECCCCHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEEHHHHHHHHHHHHCCCCC
LRPEQRGLLVTQTGTRLARSTLKTAWQRLITAAIEAGVIAEESRFTLHGLKHRGITDTRG
CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHCCCCCCCCCC
TRAHKQDAAGHVTSQMTHRYDHELQVIAPPALPTDDALAGALAFVDLVKPSDT
CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA