Click here to switch to the map view.

The map label for this gene is fimT

Identifier: 21243356

GI number: 21243356

Start: 3093250

End: 3093777

Strand: Direct

Name: fimT

Synonym: XAC2626

Alternate gene names: NA

Gene position: 3093250-3093777 (Clockwise)

Preceding gene: 21243335

Following gene: 21243362

Centisome position: 59.77

GC content: 57.77

Gene sequence:

>528_bases
ATGCACCAACCCCACAGAGGATTCAGCCTCATTGAGTGTTCTATTGCGGTGGCAGCATTCGCGGTGGCGCTATCCATCGC
GCTACCGTCCCTAACGGCATTGCGACGAACGCATCAGGTTCGGTCAGCGATGCTTGAGCTTGCTGCACATTTGGCACTGG
CAAGGTCGACCTCAATTACCCGTGGGGATCCGGTAGGAATGTGTCCTCGCGAGTCATCAGACGCTTGTGCAGCTGGTCAC
GATTGGACGCACGGCTGGCTGTTATTCGCAGATCCGGACGGAAATCGCCGACCCGATGGTGCGCATGACATCATCGCGTC
GGGGACAAGCAAGGTTGATGAGAAGATAAGCGTCCGTACCACTTCCGGGCGTACGCATCTGCGCTTTGGCCCACTCGGGA
CAATGCTGGGGACTAATGTGACCTTCAACATCTGCCGAGATGGAGGCCTTGAGGGTCAGGTCATCGTCAGCATGACTGGT
CGGCTTCGCTCCTTGCGGCCGCGCTTACCTCAACCTTGCCCCTCTTAA

Upstream 100 bases:

>100_bases
TTTGCGGTTTCCCTACCTTCTTACGGGCTTTAGGCCGATCGCGGAAACGTCAGCCGCGCCCGATGCTAGGGCTCACCGAG
AATCGAGGCTTGGCAAGGAT

Downstream 100 bases:

>100_bases
TACTTGCGGCGCGACAAGGGGCTTGCACATGCAGCCAACCCTCCCTATAATTTGCCTCCCCGCCCGAATAGCTCAGCCGG
TTAGAGCACTTGACTGTTAA

Product: fimbrial biogenesis protein

Products: NA

Alternate protein names: Type IV Pilus Assembly Protein Fimt; Type IV Pilus Assembly Protein FimT

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MHQPHRGFSLIECSIAVAAFAVALSIALPSLTALRRTHQVRSAMLELAAHLALARSTSITRGDPVGMCPRESSDACAAGH
DWTHGWLLFADPDGNRRPDGAHDIIASGTSKVDEKISVRTTSGRTHLRFGPLGTMLGTNVTFNICRDGGLEGQVIVSMTG
RLRSLRPRLPQPCPS

Sequences:

>Translated_175_residues
MHQPHRGFSLIECSIAVAAFAVALSIALPSLTALRRTHQVRSAMLELAAHLALARSTSITRGDPVGMCPRESSDACAAGH
DWTHGWLLFADPDGNRRPDGAHDIIASGTSKVDEKISVRTTSGRTHLRFGPLGTMLGTNVTFNICRDGGLEGQVIVSMTG
RLRSLRPRLPQPCPS
>Mature_175_residues
MHQPHRGFSLIECSIAVAAFAVALSIALPSLTALRRTHQVRSAMLELAAHLALARSTSITRGDPVGMCPRESSDACAAGH
DWTHGWLLFADPDGNRRPDGAHDIIASGTSKVDEKISVRTTSGRTHLRFGPLGTMLGTNVTFNICRDGGLEGQVIVSMTG
RLRSLRPRLPQPCPS

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18759; Mature: 18759

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQPHRGFSLIECSIAVAAFAVALSIALPSLTALRRTHQVRSAMLELAAHLALARSTSIT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RGDPVGMCPRESSDACAAGHDWTHGWLLFADPDGNRRPDGAHDIIASGTSKVDEKISVRT
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCEEEEEE
TSGRTHLRFGPLGTMLGTNVTFNICRDGGLEGQVIVSMTGRLRSLRPRLPQPCPS
CCCCEEEEECCCHHHHCCCEEEEEECCCCCCCEEEEEECCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MHQPHRGFSLIECSIAVAAFAVALSIALPSLTALRRTHQVRSAMLELAAHLALARSTSIT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RGDPVGMCPRESSDACAAGHDWTHGWLLFADPDGNRRPDGAHDIIASGTSKVDEKISVRT
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCEEEEEE
TSGRTHLRFGPLGTMLGTNVTFNICRDGGLEGQVIVSMTGRLRSLRPRLPQPCPS
CCCCEEEEECCCHHHHCCCEEEEEECCCCCCCEEEEEECCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA