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The map label for this gene is aidB [C]

Identifier: 21243295

GI number: 21243295

Start: 3020601

End: 3022394

Strand: Direct

Name: aidB [C]

Synonym: XAC2563

Alternate gene names: 21243295

Gene position: 3020601-3022394 (Clockwise)

Preceding gene: 21243294

Following gene: 77748663

Centisome position: 58.36

GC content: 66.67

Gene sequence:

>1794_bases
ATGAGCAGCTACACCGCCCCGCTGACCGATTTTCGCTTCGCCCTGCACGATGTGCTCGGCGCGCAAGCCCTGTTCGCCCG
GCTCGGCTATACCGAGGCCAGCACCGACATCATCGACGCCGTGCTCGAAGAGGCCGGCCGCTTCACCTCGCAGGTGCTGG
CGCCGCTCAACAGTGTGGGCGACGAGATCGGTTGCGCGTTCGACAAGAGCACGCACGCGGTGACCACTCCGCCCGGCTTC
CGCGCCGCCTACGATCAATTCGTGGAAGGCGGCTGGAACGGGCTCACCGCCGAACCGCAATTCGGCGGCCAGGGCATGCC
GCACACGCTGGGCGTGCCGCTGAGCGAAATGATCAATGCCGCCAACCTGGCCTGGGGCAACTTTCCGCTGCTGTCGCATG
GCGCAATGGAAGCGCTGCGCCAGCACGGCGAGACCTGGCAGCAGGACGTCTTCCTCAAACCCCTGATCGACGGCCGCTGG
ACCGGCACCATGTGCCTGACCGAACCGCATTGCGGCACCGATTTGGGCCTGCTCAAGACCCGTGCCGAACCCAATGCCGA
TGGCAGCTATGCCATCACCGGCACCAAGATCTTCATCACCGCCGGCGAGCACGACCTCACCGACAACATCGTGCACCTGG
TGCTGGCCAAGCTGCCGGACGCACCGGCCGGCGCCAAGGGCATCTCGCTGTTCGTCACTCCCAAGTTCAAGGTGGACCGC
GACGGCACCGTGGGTGAGCGCAACGCGCTGCATTGCGGCTCCATCGAGCACAAGATGGGCATCAAGGGCTCGGTGACCTG
CGTGATGAACTTCGAGGGCGCACAAGGCTACCTGGTCGGCCAGCCGCACAAGGGCCTGCAGGCGATGTTTACGATGATGA
ATACCGCACGCCTGAGCGTGGGCCTGCAAGGCATCGGGTTGTCCGAGCGCGCCTACCAGAACGCCCTGCGCTACAGCCGC
GAGCGGTTGCAATCGCGGGCGCTCAGCGGCGCCAAATCCCCGGACAAACCGGCCGACCCGATCATCGTGCACCCGGACGT
GCGCCGCATGTTGCTGACCGTCAAGTCGCTGACCGAAGGCAGCCGCCTGCTCGCGTTGCATGCGGCCAGCCTGGTCGACG
TCGCCCATCGCGGCGAGAGCGAACGCGAACGCGCCGACGCCGAGACCCTGGTGAGCTTCCTCACCCCGATCTCCAAGGCC
TGCCAGACCGAATGGTCGATCGAGAATACCTACCACGCGCTGCAGTGCTTCGGCGGCCACGGCTACATCCGCGAGTACGG
CATGGAGCAACTGGCCCGCGACGCGCGCATCACCACCATCTACGAAGGCACCACCGGCATCCAGGCGCTGGACCTGATCG
GCCGCAAGACCGCCGCCAGCCAGGCTGCCGGGCTGAAGCTGTTCCTGGCCGATGTGGAAACCTTCGCCAACGCGCAGGAC
GGCAACGCCGCGCTGGCCGAGTTCATCAAGCCGTTGCGCGACAAGTGCAGCGAATGGGCGATGCTGACCCGCGATGTGCT
CGATCGCGCCGCGCGCAACCCGGACGAACTCGGCGCCGCCAGCCATGACTATCTGTTTTATTCGGGCTACGTGGTGCTGG
CGTACTGGTGGGCGCGCAGCGTGGCCGCTGCCGACGCATCGGCGCACGGCGAGGACTTCAGGCGCGCCAAGCGGGAGACG
GCGCGGTTCTACTTCGCCCGCATCCTGCCACGCACCCTGACCCATGCCGCCGCCATCCGCAGTGGCGCCGCACCGCTGAT
GACGCTGGAAGCGGAACTGTTCGGCGAAGGCTGA

Upstream 100 bases:

>100_bases
GTTCTGAGCGCGCCGTCCGCGCCCACCTGACAGCTGCTCGCTACGTTTTGTTAGCCGCTCTAAGGCGCACGCCTCCCGTC
CCCGCTTCCAAGGATCCCGC

Downstream 100 bases:

>100_bases
GCGCCATCATCACGGCGCTGCCGCTGCCGTAGGAGCGGACCTGGCCGCGACGGGGCGGTGTCGCTCGGCAAGGCGTCGCG
CCCGGGTGCGCTCCGACGGG

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: Butyryl-CoA dehydrogenase; BCAD; SCAD [H]

Number of amino acids: Translated: 597; Mature: 596

Protein sequence:

>597_residues
MSSYTAPLTDFRFALHDVLGAQALFARLGYTEASTDIIDAVLEEAGRFTSQVLAPLNSVGDEIGCAFDKSTHAVTTPPGF
RAAYDQFVEGGWNGLTAEPQFGGQGMPHTLGVPLSEMINAANLAWGNFPLLSHGAMEALRQHGETWQQDVFLKPLIDGRW
TGTMCLTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGAKGISLFVTPKFKVDR
DGTVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGQPHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYSR
ERLQSRALSGAKSPDKPADPIIVHPDVRRMLLTVKSLTEGSRLLALHAASLVDVAHRGESERERADAETLVSFLTPISKA
CQTEWSIENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTAASQAAGLKLFLADVETFANAQD
GNAALAEFIKPLRDKCSEWAMLTRDVLDRAARNPDELGAASHDYLFYSGYVVLAYWWARSVAAADASAHGEDFRRAKRET
ARFYFARILPRTLTHAAAIRSGAAPLMTLEAELFGEG

Sequences:

>Translated_597_residues
MSSYTAPLTDFRFALHDVLGAQALFARLGYTEASTDIIDAVLEEAGRFTSQVLAPLNSVGDEIGCAFDKSTHAVTTPPGF
RAAYDQFVEGGWNGLTAEPQFGGQGMPHTLGVPLSEMINAANLAWGNFPLLSHGAMEALRQHGETWQQDVFLKPLIDGRW
TGTMCLTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGAKGISLFVTPKFKVDR
DGTVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGQPHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYSR
ERLQSRALSGAKSPDKPADPIIVHPDVRRMLLTVKSLTEGSRLLALHAASLVDVAHRGESERERADAETLVSFLTPISKA
CQTEWSIENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTAASQAAGLKLFLADVETFANAQD
GNAALAEFIKPLRDKCSEWAMLTRDVLDRAARNPDELGAASHDYLFYSGYVVLAYWWARSVAAADASAHGEDFRRAKRET
ARFYFARILPRTLTHAAAIRSGAAPLMTLEAELFGEG
>Mature_596_residues
SSYTAPLTDFRFALHDVLGAQALFARLGYTEASTDIIDAVLEEAGRFTSQVLAPLNSVGDEIGCAFDKSTHAVTTPPGFR
AAYDQFVEGGWNGLTAEPQFGGQGMPHTLGVPLSEMINAANLAWGNFPLLSHGAMEALRQHGETWQQDVFLKPLIDGRWT
GTMCLTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGAKGISLFVTPKFKVDRD
GTVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGQPHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYSRE
RLQSRALSGAKSPDKPADPIIVHPDVRRMLLTVKSLTEGSRLLALHAASLVDVAHRGESERERADAETLVSFLTPISKAC
QTEWSIENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTAASQAAGLKLFLADVETFANAQDG
NAALAEFIKPLRDKCSEWAMLTRDVLDRAARNPDELGAASHDYLFYSGYVVLAYWWARSVAAADASAHGEDFRRAKRETA
RFYFARILPRTLTHAAAIRSGAAPLMTLEAELFGEG

Specific function: Has an optimum specificity for 4-carbon length fatty acyl-CoAs [H]

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=413, Percent_Identity=27.6029055690073, Blast_Score=127, Evalue=3e-29,
Organism=Homo sapiens, GI226958412, Length=386, Percent_Identity=27.4611398963731, Blast_Score=100, Evalue=5e-21,
Organism=Homo sapiens, GI4557233, Length=329, Percent_Identity=27.6595744680851, Blast_Score=100, Evalue=7e-21,
Organism=Homo sapiens, GI226958414, Length=386, Percent_Identity=26.9430051813472, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI21361497, Length=366, Percent_Identity=25.9562841530055, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI4501857, Length=381, Percent_Identity=25.7217847769029, Blast_Score=88, Evalue=3e-17,
Organism=Homo sapiens, GI4557235, Length=419, Percent_Identity=24.3436754176611, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI76496475, Length=417, Percent_Identity=25.4196642685851, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI7656849, Length=369, Percent_Identity=24.9322493224932, Blast_Score=80, Evalue=8e-15,
Organism=Escherichia coli, GI87082384, Length=319, Percent_Identity=26.6457680250784, Blast_Score=105, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI86563383, Length=300, Percent_Identity=28.6666666666667, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI86563381, Length=300, Percent_Identity=28.6666666666667, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17508101, Length=365, Percent_Identity=26.8493150684932, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17569725, Length=314, Percent_Identity=29.2993630573248, Blast_Score=99, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI71985184, Length=402, Percent_Identity=25.8706467661692, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17534899, Length=316, Percent_Identity=28.7974683544304, Blast_Score=97, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17570075, Length=316, Percent_Identity=27.8481012658228, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17506239, Length=315, Percent_Identity=26.984126984127, Blast_Score=89, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17538396, Length=421, Percent_Identity=24.9406175771971, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17533517, Length=370, Percent_Identity=24.5945945945946, Blast_Score=82, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI71985192, Length=279, Percent_Identity=27.5985663082437, Blast_Score=79, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI71990804, Length=287, Percent_Identity=25.7839721254355, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17551932, Length=351, Percent_Identity=25.3561253561254, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21356377, Length=319, Percent_Identity=27.2727272727273, Blast_Score=99, Evalue=7e-21,
Organism=Drosophila melanogaster, GI24660351, Length=350, Percent_Identity=28.8571428571429, Blast_Score=96, Evalue=6e-20,
Organism=Drosophila melanogaster, GI24666513, Length=365, Percent_Identity=26.027397260274, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24646207, Length=365, Percent_Identity=25.2054794520548, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI21355753, Length=380, Percent_Identity=27.1052631578947, Blast_Score=90, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.2 [H]

Molecular weight: Translated: 64793; Mature: 64662

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSYTAPLTDFRFALHDVLGAQALFARLGYTEASTDIIDAVLEEAGRFTSQVLAPLNSVG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
DEIGCAFDKSTHAVTTPPGFRAAYDQFVEGGWNGLTAEPQFGGQGMPHTLGVPLSEMINA
HHHCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
ANLAWGNFPLLSHGAMEALRQHGETWQQDVFLKPLIDGRWTGTMCLTEPHCGTDLGLLKT
HHCCCCCCCCHHHHHHHHHHHCCCHHHHCCCHHHCCCCCCCCEEEEECCCCCCCHHHHEE
RAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGAKGISLFVTPKFKVDR
CCCCCCCCCEEEECEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEECC
DGTVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGQPHKGLQAMFTMMNTARLSV
CCCCCCCCCEECCCCHHCCCCCCEEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHH
GLQGIGLSERAYQNALRYSRERLQSRALSGAKSPDKPADPIIVHPDVRRMLLTVKSLTEG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCC
SRLLALHAASLVDVAHRGESERERADAETLVSFLTPISKACQTEWSIENTYHALQCFGGH
CCEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEHHEECCC
GYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTAASQAAGLKLFLADVETFANAQD
CHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCC
GNAALAEFIKPLRDKCSEWAMLTRDVLDRAARNPDELGAASHDYLFYSGYVVLAYWWARS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEECCHHHHHHHHHHH
VAAADASAHGEDFRRAKRETARFYFARILPRTLTHAAAIRSGAAPLMTLEAELFGEG
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCC
>Mature Secondary Structure 
SSYTAPLTDFRFALHDVLGAQALFARLGYTEASTDIIDAVLEEAGRFTSQVLAPLNSVG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
DEIGCAFDKSTHAVTTPPGFRAAYDQFVEGGWNGLTAEPQFGGQGMPHTLGVPLSEMINA
HHHCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
ANLAWGNFPLLSHGAMEALRQHGETWQQDVFLKPLIDGRWTGTMCLTEPHCGTDLGLLKT
HHCCCCCCCCHHHHHHHHHHHCCCHHHHCCCHHHCCCCCCCCEEEEECCCCCCCHHHHEE
RAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGAKGISLFVTPKFKVDR
CCCCCCCCCEEEECEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEECC
DGTVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGQPHKGLQAMFTMMNTARLSV
CCCCCCCCCEECCCCHHCCCCCCEEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHH
GLQGIGLSERAYQNALRYSRERLQSRALSGAKSPDKPADPIIVHPDVRRMLLTVKSLTEG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCC
SRLLALHAASLVDVAHRGESERERADAETLVSFLTPISKACQTEWSIENTYHALQCFGGH
CCEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEHHEECCC
GYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTAASQAAGLKLFLADVETFANAQD
CHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCC
GNAALAEFIKPLRDKCSEWAMLTRDVLDRAARNPDELGAASHDYLFYSGYVVLAYWWARS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEECCHHHHHHHHHHH
VAAADASAHGEDFRRAKRETARFYFARILPRTLTHAAAIRSGAAPLMTLEAELFGEG
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8399220; 7857927 [H]