| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is ordL [H]
Identifier: 21243214
GI number: 21243214
Start: 2889109
End: 2890425
Strand: Direct
Name: ordL [H]
Synonym: XAC2481
Alternate gene names: 21243214
Gene position: 2889109-2890425 (Clockwise)
Preceding gene: 21243213
Following gene: 21243215
Centisome position: 55.82
GC content: 69.93
Gene sequence:
>1317_bases ATGGCTCGCCCGCACGCGCCACTGCCGCACAGCAACTCGCCGGGCAACGGGTATCCGGACAGCTGGTACGCACGCAGCAC GCCAGCCCTACCCCAACAATCGCGCCTGCAAGGCGCCGAGCACGCCGACGTCTGCATTCTCGGCGGTGGCTATACCGGCC TCACCGCTGCGCTGGCGCTGGCCGAGGCCGGTTACGCCGTCACCGTGCTGGAAGCCCGGCGTGTGGGCTGGGGCGCGTCA GGGCGCAATGGCGGCCAGGCCATCGTTGGCTACGGGTGCGAGCAGGAAACGCTGGAAGCGCTGGTCGGCAACGACGATGC TCGCCTGTTGTTCGATTTCTCGCGCGACGGCATGCGCCTGCTGCGCGCACGCATCGCCGGCCATGCCATCGCCTGCGACT GGCGCGACGGCCACGCGCATGTGCCGCTGAAGCCGCGTCAGGTACGGGCGCTGCAGCACGGCATCGTGCGCATGGCCGAA CGCTACGACTACCCGCTGCAGTGGTGGGACCGCGCACGCACCCGCCAAATGCTGGACAGCCCGCTGTACCTGGGGGCCAT GTTCGACCCCGCCAGCGGCCATCTGCATCCGCTGGCCTATGCATTGGGCCTGGCACGGGCCGCGCTGGCCGCCGGCGTGC GCATCTACGAAGATTCGGCCGTGACCAGGCAGCAACCCGGGGCGCGCGTGGTGATGCATACCGCCCACGGCAGCGTGACC GCCGCGTTCGGCGTGATCGCCGGCAATGCGCTGCTGCACGGCATCGCCCCGCCCCTGGAGCAGCGCATCATGCCGGTCGG CACCTATGTCGGCGCCACGCCGCCATTGGGACAAGCGCGTGCGCGCGCCCTGATCGCCAACGACATGGCGGTAGCCGATA CCAACTGGGCACTGGATTACTATCGGCTCAGTGCCGATCACCGCCTGCTGTTCGGCGGGCGTGCCAGTTACTCCTCGCGT CCGCCTGCGGGCTTGCAGCGCCTGATGACCCGGCGCATGCACACGGTATTTCCGCAGCTGCACGCTGTGCCGCTGGAAAC GCTGTGGGGCGGCTACGTGGACATCTCGCGCAACCGTGCACCGCACTGGGGCCGGCTGGCGCCCAACCTGTACTTCGCAC AGGGCTTTTCCGGACATGGCGTGGCTGCCACCGGCCTGGCCGGCCAGGTCATTGCCGAGGCCATCGCCGGCCAGAGCCGG CGCCTGGACGTGTTCGAACGCATCGGCCACCGCCCGTTCCCTGGCGGGCAGCGGCTGCGGACCCCGCTGCTGGTGGCGGC GATGAGCTGGTATCGGCTGCGCGATGCGCTGTGGTGA
Upstream 100 bases:
>100_bases AGTTCCAGCACGTATTCGGCCAGCAGAAACAACGCGAGCTGCTCGACTACCAGGCGCAGGTACCGGACCTGGATTACGCG CGGTACCTGCGCACCGTGTG
Downstream 100 bases:
>100_bases CCGCCACGCTTTGGAACGTGGTGCTCAAGTTTTGGCGAGCAGGGCCGTTAGCTGACCTGACGGTTCGATCCAGACGGCCA GCCGATGTCCCCAGGTACCC
Product: oxidoreductase
Products: NA
Alternate protein names: Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase [H]
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MARPHAPLPHSNSPGNGYPDSWYARSTPALPQQSRLQGAEHADVCILGGGYTGLTAALALAEAGYAVTVLEARRVGWGAS GRNGGQAIVGYGCEQETLEALVGNDDARLLFDFSRDGMRLLRARIAGHAIACDWRDGHAHVPLKPRQVRALQHGIVRMAE RYDYPLQWWDRARTRQMLDSPLYLGAMFDPASGHLHPLAYALGLARAALAAGVRIYEDSAVTRQQPGARVVMHTAHGSVT AAFGVIAGNALLHGIAPPLEQRIMPVGTYVGATPPLGQARARALIANDMAVADTNWALDYYRLSADHRLLFGGRASYSSR PPAGLQRLMTRRMHTVFPQLHAVPLETLWGGYVDISRNRAPHWGRLAPNLYFAQGFSGHGVAATGLAGQVIAEAIAGQSR RLDVFERIGHRPFPGGQRLRTPLLVAAMSWYRLRDALW
Sequences:
>Translated_438_residues MARPHAPLPHSNSPGNGYPDSWYARSTPALPQQSRLQGAEHADVCILGGGYTGLTAALALAEAGYAVTVLEARRVGWGAS GRNGGQAIVGYGCEQETLEALVGNDDARLLFDFSRDGMRLLRARIAGHAIACDWRDGHAHVPLKPRQVRALQHGIVRMAE RYDYPLQWWDRARTRQMLDSPLYLGAMFDPASGHLHPLAYALGLARAALAAGVRIYEDSAVTRQQPGARVVMHTAHGSVT AAFGVIAGNALLHGIAPPLEQRIMPVGTYVGATPPLGQARARALIANDMAVADTNWALDYYRLSADHRLLFGGRASYSSR PPAGLQRLMTRRMHTVFPQLHAVPLETLWGGYVDISRNRAPHWGRLAPNLYFAQGFSGHGVAATGLAGQVIAEAIAGQSR RLDVFERIGHRPFPGGQRLRTPLLVAAMSWYRLRDALW >Mature_437_residues ARPHAPLPHSNSPGNGYPDSWYARSTPALPQQSRLQGAEHADVCILGGGYTGLTAALALAEAGYAVTVLEARRVGWGASG RNGGQAIVGYGCEQETLEALVGNDDARLLFDFSRDGMRLLRARIAGHAIACDWRDGHAHVPLKPRQVRALQHGIVRMAER YDYPLQWWDRARTRQMLDSPLYLGAMFDPASGHLHPLAYALGLARAALAAGVRIYEDSAVTRQQPGARVVMHTAHGSVTA AFGVIAGNALLHGIAPPLEQRIMPVGTYVGATPPLGQARARALIANDMAVADTNWALDYYRLSADHRLLFGGRASYSSRP PAGLQRLMTRRMHTVFPQLHAVPLETLWGGYVDISRNRAPHWGRLAPNLYFAQGFSGHGVAATGLAGQVIAEAIAGQSRR LDVFERIGHRPFPGGQRLRTPLLVAAMSWYRLRDALW
Specific function: Involved in the breakdown of putrescine via the oxidation of L-glutamylputrescine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=419, Percent_Identity=42.7207637231504, Blast_Score=328, Evalue=3e-91,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 47620; Mature: 47489
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPHAPLPHSNSPGNGYPDSWYARSTPALPQQSRLQGAEHADVCILGGGYTGLTAALAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCHHHHHHHHHH AEAGYAVTVLEARRVGWGASGRNGGQAIVGYGCEQETLEALVGNDDARLLFDFSRDGMRL HHCCCEEEEEEHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCEEEEECCCHHHHH LRARIAGHAIACDWRDGHAHVPLKPRQVRALQHGIVRMAERYDYPLQWWDRARTRQMLDS HHHHHCCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC PLYLGAMFDPASGHLHPLAYALGLARAALAAGVRIYEDSAVTRQQPGARVVMHTAHGSVT CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCHHCCCCCCEEEEEECCCCHH AAFGVIAGNALLHGIAPPLEQRIMPVGTYVGATPPLGQARARALIANDMAVADTNWALDY HHHHHHHHHHHHHCCCCCHHHHCEEHHHHCCCCCCCCHHHHHHHHHCCEEEECCCCEEEE YRLSADHRLLFGGRASYSSRPPAGLQRLMTRRMHTVFPQLHAVPLETLWGGYVDISRNRA EEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCCC PHWGRLAPNLYFAQGFSGHGVAATGLAGQVIAEAIAGQSRRLDVFERIGHRPFPGGQRLR CCCCCCCCCEEEECCCCCCCEEECCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHH TPLLVAAMSWYRLRDALW HHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARPHAPLPHSNSPGNGYPDSWYARSTPALPQQSRLQGAEHADVCILGGGYTGLTAALAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCHHHHHHHHHH AEAGYAVTVLEARRVGWGASGRNGGQAIVGYGCEQETLEALVGNDDARLLFDFSRDGMRL HHCCCEEEEEEHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCEEEEECCCHHHHH LRARIAGHAIACDWRDGHAHVPLKPRQVRALQHGIVRMAERYDYPLQWWDRARTRQMLDS HHHHHCCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC PLYLGAMFDPASGHLHPLAYALGLARAALAAGVRIYEDSAVTRQQPGARVVMHTAHGSVT CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCHHCCCCCCEEEEEECCCCHH AAFGVIAGNALLHGIAPPLEQRIMPVGTYVGATPPLGQARARALIANDMAVADTNWALDY HHHHHHHHHHHHHCCCCCHHHHCEEHHHHCCCCCCCCHHHHHHHHHCCEEEECCCCEEEE YRLSADHRLLFGGRASYSSRPPAGLQRLMTRRMHTVFPQLHAVPLETLWGGYVDISRNRA EEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCCC PHWGRLAPNLYFAQGFSGHGVAATGLAGQVIAEAIAGQSRRLDVFERIGHRPFPGGQRLR CCCCCCCCCEEEECCCCCCCEEECCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHH TPLLVAAMSWYRLRDALW HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 1840553; 7984428 [H]