| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243177
Identifier: 21243177
GI number: 21243177
Start: 2844297
End: 2846414
Strand: Direct
Name: 21243177
Synonym: XAC2444
Alternate gene names: NA
Gene position: 2844297-2846414 (Clockwise)
Preceding gene: 21243176
Following gene: 21243178
Centisome position: 54.96
GC content: 56.66
Gene sequence:
>2118_bases ATGACACTGTCGCCGCTCGCATATGCTGATTCACTTCGGATCGAGAACATCGATTTCGTTTCGCCGGATGAGATCAAGGT GCTTCTGGACATTGAAGCCCCAGATAATGTCGCGCTAAATACCGGTACGCCGCGCCCCTTTCCCCGCATTAACGGCTACG TGCTGGTGCCCAGTGACGAAGGCCATCTTGTTGCCCAAGTGGAATGGATCACGGTAGAGCGATCTCAGTACTCGAAACGC AAGGGCATGCAGGACTTCGGACTGGTGGACCTGCCGTACCCATTGCGCAAAATGAGCCTCAATCCCTTGGGCCGCTTGAC TTACGAGGGAACCCATGGAGGCACGGAGCGCTACAGCTTTCGCCGTGGCGTAGACGCTTATCCCTCGGTCGGGGCTCCGG TACTGTTACCAACACAGAATCAACTGCGTGCCATTGTCGAGTCCGGGGATAACCGCAGAGTCATGATCGGTATAAGTCCG TTGGCTGCGAACGCCAAGGTGATGATTGATCCTGACCGCTTGTTTGGTCGCCATCTAGCCGTGTTGGGCAATACAGGCAG TGGCAAGTCCTGCTCCGTAGCCGGCCTGATTCGTTGGTCGATGGCGGAGGCGAAAAAGGTCCGTGGCGATGACGATCCCA ATGCTCGCTTTATTGTGCTTGACCCGAACGGAGAGTATGCGAATACCTTCCGTGACATGAGCAAGGTTCGCGTGTTTGCC GTGGAGGCCGACCACGACGGCGGGATCAGTCAGTTGAAGGTGCCGCTTTGGTTTTGGAACAGCGCTGAATGGAGCGCTTT TACACAAGCGAGCGCCAAGGCGCAGAGACCTACGCTGATTCAAGCCCTTCGCTCGGTGCGAGATGGCTCAGTCGACACCG CCTCTATGCCGAGTCATGAGATGCGGCGCTTTCTGCGGACACTCGTGAGCATAATTCAAATTGAACGAAACGCAGGAAGA CCCTGGGCGAACTTCCCACACCCAAAGAACTTTCTTCAGGGGGCTCTAGTCTGGCAGGAGAGCCTGTCGAATGACGGCAG CTTTACCCCGGACGAGAGCGCGGCATTGGGAGCACTGCGACAGAAAATTTCAGATTTCGAGCAGGCCCGCAAGGCGCAAT ATTCGGAGCAAAAGTTCACCACTCAGGAAGTCGACGAGTTCCTATCACTTGCTCGTGCGGCGCACGCTGCGTTTGGCGGC AGCGATGCCGATACTTTACCGATCGACGCCGATGTTCCCCGCGCGTTTTCCGGCGATCAGCTATTGCGCAGCGTAGAGGC CAACGCGGAGTTGTTGAATGTGTCCGAGTACGTCGAGACGATGCTGATGCGCATCCGAACGATTCTCTCGGATAGCCGCA TGAAAACCATCAGCGGTGACGACGACGGGGTGACGCTGGCCGGTTGGCTGGCGGACTACATAGGCGACGATCGCGGCTCC AATGGCTCTGTGACAGTAATTGACCTATCGCTCGTGCCGGCAGATGTCGTTCATATCGTTACCGCCGTGATTGCCCGCAT GACCTTGGAGGCCTTGCAGCGATACCGCAAACTCAGCAAAGGAAAAACGTTACCTACAGTCTTGGTGATGGAGGAGGCAC ACACCTTCATCCGTCGATACAACGACAATTCCGAAAACCAAAATGCTGCTGCAATCTGTTGCCAGGTGTTTGAGAAAATC GCCCGTGAGGGTCGCAAGTTCGGCCTTGGGCTGGTGCTGTCCTCCCAGCGCCCCAGCGAGCTGTCGCCCACGGTCCTGTC TCAGTGCAACAGTTATCTATTGCACCGCATCAGCAACGATCGCGACCAAGAGTTGGTACACCGATTAGTACCTGACAATC TGCGCGGTTTGCTTAGAGATCTTCCGTCGCTTCCGTCACGGCATGCGATTTTGATGGGCTGGGCCTCGGAGCTGCCCGTG CTGGTGGAGATGAACAAGTTGCCTGAATCGCAACGGCCAAAATCCGACGACCCGGATTTTTGGGCGGTATGGTCCGGCAA GGGGCTGAACGACGTAGGGCAAGAGGTCGCAGTGGAACGGCCGATCAACTGGAAGAAGATCGCGGACGATTGGCAGCAGG TGGAGGCGGCGGACGACTCAGCAGGAGAAAATCTCTGA
Upstream 100 bases:
>100_bases GAATGAGTGAGTTGCTCAAACAGCGCTGGCATACCGCGCCTCCTGTGCAGAAAGCGGAGGGGGACGGCTCCAAGGACGAT CTTGGCATAGAGGATTTGCC
Downstream 100 bases:
>100_bases GTGCGCAGGATGCCTGCTCCAAATCTGCGCCACTCCGGGACGAATTTTTTCGGTAACATGCGAAATCCCGGCGCATACCG GAATCTACCGAAAAACGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 705; Mature: 704
Protein sequence:
>705_residues MTLSPLAYADSLRIENIDFVSPDEIKVLLDIEAPDNVALNTGTPRPFPRINGYVLVPSDEGHLVAQVEWITVERSQYSKR KGMQDFGLVDLPYPLRKMSLNPLGRLTYEGTHGGTERYSFRRGVDAYPSVGAPVLLPTQNQLRAIVESGDNRRVMIGISP LAANAKVMIDPDRLFGRHLAVLGNTGSGKSCSVAGLIRWSMAEAKKVRGDDDPNARFIVLDPNGEYANTFRDMSKVRVFA VEADHDGGISQLKVPLWFWNSAEWSAFTQASAKAQRPTLIQALRSVRDGSVDTASMPSHEMRRFLRTLVSIIQIERNAGR PWANFPHPKNFLQGALVWQESLSNDGSFTPDESAALGALRQKISDFEQARKAQYSEQKFTTQEVDEFLSLARAAHAAFGG SDADTLPIDADVPRAFSGDQLLRSVEANAELLNVSEYVETMLMRIRTILSDSRMKTISGDDDGVTLAGWLADYIGDDRGS NGSVTVIDLSLVPADVVHIVTAVIARMTLEALQRYRKLSKGKTLPTVLVMEEAHTFIRRYNDNSENQNAAAICCQVFEKI AREGRKFGLGLVLSSQRPSELSPTVLSQCNSYLLHRISNDRDQELVHRLVPDNLRGLLRDLPSLPSRHAILMGWASELPV LVEMNKLPESQRPKSDDPDFWAVWSGKGLNDVGQEVAVERPINWKKIADDWQQVEAADDSAGENL
Sequences:
>Translated_705_residues MTLSPLAYADSLRIENIDFVSPDEIKVLLDIEAPDNVALNTGTPRPFPRINGYVLVPSDEGHLVAQVEWITVERSQYSKR KGMQDFGLVDLPYPLRKMSLNPLGRLTYEGTHGGTERYSFRRGVDAYPSVGAPVLLPTQNQLRAIVESGDNRRVMIGISP LAANAKVMIDPDRLFGRHLAVLGNTGSGKSCSVAGLIRWSMAEAKKVRGDDDPNARFIVLDPNGEYANTFRDMSKVRVFA VEADHDGGISQLKVPLWFWNSAEWSAFTQASAKAQRPTLIQALRSVRDGSVDTASMPSHEMRRFLRTLVSIIQIERNAGR PWANFPHPKNFLQGALVWQESLSNDGSFTPDESAALGALRQKISDFEQARKAQYSEQKFTTQEVDEFLSLARAAHAAFGG SDADTLPIDADVPRAFSGDQLLRSVEANAELLNVSEYVETMLMRIRTILSDSRMKTISGDDDGVTLAGWLADYIGDDRGS NGSVTVIDLSLVPADVVHIVTAVIARMTLEALQRYRKLSKGKTLPTVLVMEEAHTFIRRYNDNSENQNAAAICCQVFEKI AREGRKFGLGLVLSSQRPSELSPTVLSQCNSYLLHRISNDRDQELVHRLVPDNLRGLLRDLPSLPSRHAILMGWASELPV LVEMNKLPESQRPKSDDPDFWAVWSGKGLNDVGQEVAVERPINWKKIADDWQQVEAADDSAGENL >Mature_704_residues TLSPLAYADSLRIENIDFVSPDEIKVLLDIEAPDNVALNTGTPRPFPRINGYVLVPSDEGHLVAQVEWITVERSQYSKRK GMQDFGLVDLPYPLRKMSLNPLGRLTYEGTHGGTERYSFRRGVDAYPSVGAPVLLPTQNQLRAIVESGDNRRVMIGISPL AANAKVMIDPDRLFGRHLAVLGNTGSGKSCSVAGLIRWSMAEAKKVRGDDDPNARFIVLDPNGEYANTFRDMSKVRVFAV EADHDGGISQLKVPLWFWNSAEWSAFTQASAKAQRPTLIQALRSVRDGSVDTASMPSHEMRRFLRTLVSIIQIERNAGRP WANFPHPKNFLQGALVWQESLSNDGSFTPDESAALGALRQKISDFEQARKAQYSEQKFTTQEVDEFLSLARAAHAAFGGS DADTLPIDADVPRAFSGDQLLRSVEANAELLNVSEYVETMLMRIRTILSDSRMKTISGDDDGVTLAGWLADYIGDDRGSN GSVTVIDLSLVPADVVHIVTAVIARMTLEALQRYRKLSKGKTLPTVLVMEEAHTFIRRYNDNSENQNAAAICCQVFEKIA REGRKFGLGLVLSSQRPSELSPTVLSQCNSYLLHRISNDRDQELVHRLVPDNLRGLLRDLPSLPSRHAILMGWASELPVL VEMNKLPESQRPKSDDPDFWAVWSGKGLNDVGQEVAVERPINWKKIADDWQQVEAADDSAGENL
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJECL08 and MJ1565 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002789 - InterPro: IPR018538 [H]
Pfam domain/function: PF01935 DUF87; PF09378 HAS-barrel [H]
EC number: NA
Molecular weight: Translated: 78161; Mature: 78030
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSPLAYADSLRIENIDFVSPDEIKVLLDIEAPDNVALNTGTPRPFPRINGYVLVPSDE CCCCCCCHHCCCEECCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEECCC GHLVAQVEWITVERSQYSKRKGMQDFGLVDLPYPLRKMSLNPLGRLTYEGTHGGTERYSF CCEEEEEEEEEEEHHHHHHHCCCCCCCEEECCCCHHHCCCCCCCCEEECCCCCCCHHHHH RRGVDAYPSVGAPVLLPTQNQLRAIVESGDNRRVMIGISPLAANAKVMIDPDRLFGRHLA HCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECHHHHHCCEEE VLGNTGSGKSCSVAGLIRWSMAEAKKVRGDDDPNARFIVLDPNGEYANTFRDMSKVRVFA EEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHEEEEE VEADHDGGISQLKVPLWFWNSAEWSAFTQASAKAQRPTLIQALRSVRDGSVDTASMPSHE EECCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHH MRRFLRTLVSIIQIERNAGRPWANFPHPKNFLQGALVWQESLSNDGSFTPDESAALGALR HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH QKISDFEQARKAQYSEQKFTTQEVDEFLSLARAAHAAFGGSDADTLPIDADVPRAFSGDQ HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH LLRSVEANAELLNVSEYVETMLMRIRTILSDSRMKTISGDDDGVTLAGWLADYIGDDRGS HHHHHHCCCHHCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEHHHHHHHHHCCCCCC NGSVTVIDLSLVPADVVHIVTAVIARMTLEALQRYRKLSKGKTLPTVLVMEEAHTFIRRY CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHH NDNSENQNAAAICCQVFEKIAREGRKFGLGLVLSSQRPSELSPTVLSQCNSYLLHRISND CCCCCCCHHHHHHHHHHHHHHHCCHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC RDQELVHRLVPDNLRGLLRDLPSLPSRHAILMGWASELPVLVEMNKLPESQRPKSDDPDF HHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCE WAVWSGKGLNDVGQEVAVERPINWKKIADDWQQVEAADDSAGENL EEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TLSPLAYADSLRIENIDFVSPDEIKVLLDIEAPDNVALNTGTPRPFPRINGYVLVPSDE CCCCCCHHCCCEECCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEECCC GHLVAQVEWITVERSQYSKRKGMQDFGLVDLPYPLRKMSLNPLGRLTYEGTHGGTERYSF CCEEEEEEEEEEEHHHHHHHCCCCCCCEEECCCCHHHCCCCCCCCEEECCCCCCCHHHHH RRGVDAYPSVGAPVLLPTQNQLRAIVESGDNRRVMIGISPLAANAKVMIDPDRLFGRHLA HCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECHHHHHCCEEE VLGNTGSGKSCSVAGLIRWSMAEAKKVRGDDDPNARFIVLDPNGEYANTFRDMSKVRVFA EEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHEEEEE VEADHDGGISQLKVPLWFWNSAEWSAFTQASAKAQRPTLIQALRSVRDGSVDTASMPSHE EECCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHH MRRFLRTLVSIIQIERNAGRPWANFPHPKNFLQGALVWQESLSNDGSFTPDESAALGALR HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH QKISDFEQARKAQYSEQKFTTQEVDEFLSLARAAHAAFGGSDADTLPIDADVPRAFSGDQ HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH LLRSVEANAELLNVSEYVETMLMRIRTILSDSRMKTISGDDDGVTLAGWLADYIGDDRGS HHHHHHCCCHHCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEHHHHHHHHHCCCCCC NGSVTVIDLSLVPADVVHIVTAVIARMTLEALQRYRKLSKGKTLPTVLVMEEAHTFIRRY CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHH NDNSENQNAAAICCQVFEKIAREGRKFGLGLVLSSQRPSELSPTVLSQCNSYLLHRISND CCCCCCCHHHHHHHHHHHHHHHCCHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC RDQELVHRLVPDNLRGLLRDLPSLPSRHAILMGWASELPVLVEMNKLPESQRPKSDDPDF HHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCE WAVWSGKGLNDVGQEVAVERPINWKKIADDWQQVEAADDSAGENL EEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]