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The map label for this gene is xamIR [H]

Identifier: 21243170

GI number: 21243170

Start: 2837279

End: 2838196

Strand: Direct

Name: xamIR [H]

Synonym: XAC2437

Alternate gene names: 21243170

Gene position: 2837279-2838196 (Clockwise)

Preceding gene: 21243169

Following gene: 21243171

Centisome position: 54.82

GC content: 63.18

Gene sequence:

>918_bases
ATGACAAGCGCACCGCCTCGATGGACCACTGCCGAACTGGCTGAAGACGCCGCAACCTCCGCCGCGCAGTTCCGGACCGA
GCGCCTGGCCGTCACTGACTCCTGGGCAACCCACTACAACCAGGCGCGCGGTAAGTTCGAGTTGCTGTTCAAGAAGCTGA
GCGACCTCAACCCTGGTGCGATCACCGATGACAACCTGGCCGAAGCCTACGGCCTGGGACTCGGCGAAGCGCTGCGCTAC
CTGGCCGGCCCGCCGATCTCCGATGACGATCTTCAAGTCATCGCCGATGTCGAGTCGATCGCCCCGGGCGTCTTGAAGAA
AAACTCCGAGGCGCTGCGTAAGGTGTTCGAGGTCATCGAACGCGTGATTGATCCGCATCGGTTCCCGTGGATGGAGGCCG
GCGGCGCACCGACCGATCAGCAACGCGAAGCGGCCTTGTTGGCTTCGTCGGTGCTCCTGGCCGCGCAGCGCATCGCCACC
GAGCGACGCAACGAGGGCAAGGAGAACCAAGAGACGACGGTGAAGGACTACCTTCGCAGCCTGGGCTTCACCGAGGCCCC
GGCCGTGGCGATCAACACGATCGTCAAAGGGCCGCAGGCCATGCAGTTCTGCGCTGAATGCCAGCTCGGTGAGCGTAAGG
CCGATGTTGTCGTGCGCTTGCACGACACGCGCCTCATGGCGATCGAGTGCAAGGTGTCGAACAGCGCAACCAACAGCGTC
AAGCGTCTGAACAACGACGCGGCCGTCAAGGCCGAGTACTGGATCAAACAGTTCGGCACTGCGCAGGTCGTGCCGGCCGC
TGCGCTGGCCGGCGTCTTCAAGGTGCTGAACCTTGAACAGGCACAGGCGCGCGGCCTCTCCCTTTTCTGGTCGCATGATC
TCGACAAGCTTGGTGCGTTCATCGACTCCACGAAGTGA

Upstream 100 bases:

>100_bases
TCAACACCGGGAGCGGCAGAACCTATGCCGGCGGCTTGACCAAGTTTGAGCCCAAGGAGATCGAGCGCCTGCGCATCCCA
AGCCTGGAAACACTTCTTGC

Downstream 100 bases:

>100_bases
GGCAAAGCATGCAGCTTGGAAGAGTCCCTCAGCACGATATTTCCCTTGGCGCCCACCAACGTGTGGACGGGCAGAAGTTC
AAGCTGACGGCACGACTGTT

Product: type II restriction enzyme XamI

Products: NA

Alternate protein names: R.XamI; Endonuclease XamI; Type II restriction enzyme XamI [H]

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MTSAPPRWTTAELAEDAATSAAQFRTERLAVTDSWATHYNQARGKFELLFKKLSDLNPGAITDDNLAEAYGLGLGEALRY
LAGPPISDDDLQVIADVESIAPGVLKKNSEALRKVFEVIERVIDPHRFPWMEAGGAPTDQQREAALLASSVLLAAQRIAT
ERRNEGKENQETTVKDYLRSLGFTEAPAVAINTIVKGPQAMQFCAECQLGERKADVVVRLHDTRLMAIECKVSNSATNSV
KRLNNDAAVKAEYWIKQFGTAQVVPAAALAGVFKVLNLEQAQARGLSLFWSHDLDKLGAFIDSTK

Sequences:

>Translated_305_residues
MTSAPPRWTTAELAEDAATSAAQFRTERLAVTDSWATHYNQARGKFELLFKKLSDLNPGAITDDNLAEAYGLGLGEALRY
LAGPPISDDDLQVIADVESIAPGVLKKNSEALRKVFEVIERVIDPHRFPWMEAGGAPTDQQREAALLASSVLLAAQRIAT
ERRNEGKENQETTVKDYLRSLGFTEAPAVAINTIVKGPQAMQFCAECQLGERKADVVVRLHDTRLMAIECKVSNSATNSV
KRLNNDAAVKAEYWIKQFGTAQVVPAAALAGVFKVLNLEQAQARGLSLFWSHDLDKLGAFIDSTK
>Mature_304_residues
TSAPPRWTTAELAEDAATSAAQFRTERLAVTDSWATHYNQARGKFELLFKKLSDLNPGAITDDNLAEAYGLGLGEALRYL
AGPPISDDDLQVIADVESIAPGVLKKNSEALRKVFEVIERVIDPHRFPWMEAGGAPTDQQREAALLASSVLLAAQRIATE
RRNEGKENQETTVKDYLRSLGFTEAPAVAINTIVKGPQAMQFCAECQLGERKADVVVRLHDTRLMAIECKVSNSATNSVK
RLNNDAAVKAEYWIKQFGTAQVVPAAALAGVFKVLNLEQAQARGLSLFWSHDLDKLGAFIDSTK

Specific function: Recognizes the double-stranded sequence GTCGAC and cleaves after G-1 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019072 [H]

Pfam domain/function: PF09572 RE_XamI [H]

EC number: =3.1.21.4 [H]

Molecular weight: Translated: 33327; Mature: 33196

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSAPPRWTTAELAEDAATSAAQFRTERLAVTDSWATHYNQARGKFELLFKKLSDLNPGA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHCHHHHHHHHHHHCCCCCC
ITDDNLAEAYGLGLGEALRYLAGPPISDDDLQVIADVESIAPGVLKKNSEALRKVFEVIE
CCCCHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHH
RVIDPHRFPWMEAGGAPTDQQREAALLASSVLLAAQRIATERRNEGKENQETTVKDYLRS
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LGFTEAPAVAINTIVKGPQAMQFCAECQLGERKADVVVRLHDTRLMAIECKVSNSATNSV
CCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEEECCCHHHHH
KRLNNDAAVKAEYWIKQFGTAQVVPAAALAGVFKVLNLEQAQARGLSLFWSHDLDKLGAF
HHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHH
IDSTK
HCCCC
>Mature Secondary Structure 
TSAPPRWTTAELAEDAATSAAQFRTERLAVTDSWATHYNQARGKFELLFKKLSDLNPGA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHCHHHHHHHHHHHCCCCCC
ITDDNLAEAYGLGLGEALRYLAGPPISDDDLQVIADVESIAPGVLKKNSEALRKVFEVIE
CCCCHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHH
RVIDPHRFPWMEAGGAPTDQQREAALLASSVLLAAQRIATERRNEGKENQETTVKDYLRS
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LGFTEAPAVAINTIVKGPQAMQFCAECQLGERKADVVVRLHDTRLMAIECKVSNSATNSV
CCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEEECCCHHHHH
KRLNNDAAVKAEYWIKQFGTAQVVPAAALAGVFKVLNLEQAQARGLSLFWSHDLDKLGAF
HHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHH
IDSTK
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9130589 [H]