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The map label for this gene is insF1 [C]

Identifier: 21243165

GI number: 21243165

Start: 2830683

End: 2831588

Strand: Direct

Name: insF1 [C]

Synonym: XAC2432

Alternate gene names: 21243165

Gene position: 2830683-2831588 (Clockwise)

Preceding gene: 21243164

Following gene: 21243166

Centisome position: 54.69

GC content: 64.13

Gene sequence:

>906_bases
GTGATGGGCTTCATCGACGCACAACGCGAGCACTTCGGGGTCGAGTCGATCTGCAAAGCCTTGCAGGTTGCCCCGTCGGG
CTATTGGCGCCGTGCTGCACGCCGCAGCAACCCGGCGTTGCTGCCGGCTAGGGCCAAGGGCGATGCCGAACTGGTGCCGC
AGATCGAGCGCGTGTGGACCAGCAACCTGCAGGTCTACGGCTACCGCAAGGTCTGGCGACAGATGCTGCGCGAAGGCACG
GCCGTTGCGCGCTGCACGGTCGAGCGGCTGATGCGGCTCAAGGGTTTGCAGGGCGCGCGACGCGGCAAGAAGATCCTAAC
CACGGTGCCGGATGCCAAGGCGCCGTGTCCGCTGGATCGGGTGAACCGGCAGTTCAAGGCCGACAAGCCGAACCAGTTGT
GGGTCAGTGACTTCACCTACGTCTCGACCTGGCAGGGCATGGTCTACGTGGCCTTCGTCGTGGACGTGTACGCGCGGTTC
ATCGTGGGTTGGCGGGTCAGCCGTTCCATGCGAACGGATTTTGTGCTCGACGCGCTGGAGCAGGCGCTGTACGCGCGCAA
GCCCGAGCGCGATGGCGCCTTGATCCATCACTCGGACCGCGGCTTGCAATACGTCAGCATCCGCTACAGCGAGCGGCTGG
CCGAAGCGGGCATCGAGCCCTCGGTAGGCAGCAAGGGTGACAGCTATGACAACGCCCTGGCCGAGACCATCAACGGCTTG
TATAAGACCGAACTGATCCACCGCCGGGCGCCCTGGAAGAGCAAGGAAGCCGTTGAACTCGCCACGCTCGAATGGGTCTC
GTGGTTCAACCATCACCGGTTGATGGAGTCCCTCGGCTACATCCCGCCGGCCGAAGCCGAGGCTAACTACCATTGGCAAC
TCGCAGGTCAGGCCATGTCGGTCTGA

Upstream 100 bases:

>100_bases
AGCTAGAGCGCGAGGTCCGCGAACTGCGCCAGACCAACGAGATCCTGAAGCTGGCCAGCGCGTATTTCGCCAAGGCGGAA
CTCGACCGCCACCACAAGAA

Downstream 100 bases:

>100_bases
CTCACACCAACTGGCCTCCACGAAAGCCGGGGCGATTCAAAAGCGCTTATGTCCGTCTAGACATGGACGAGCAAATTGCG
CGCTCGGCTGCTACAAAGCT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MMGFIDAQREHFGVESICKALQVAPSGYWRRAARRSNPALLPARAKGDAELVPQIERVWTSNLQVYGYRKVWRQMLREGT
AVARCTVERLMRLKGLQGARRGKKILTTVPDAKAPCPLDRVNRQFKADKPNQLWVSDFTYVSTWQGMVYVAFVVDVYARF
IVGWRVSRSMRTDFVLDALEQALYARKPERDGALIHHSDRGLQYVSIRYSERLAEAGIEPSVGSKGDSYDNALAETINGL
YKTELIHRRAPWKSKEAVELATLEWVSWFNHHRLMESLGYIPPAEAEANYHWQLAGQAMSV

Sequences:

>Translated_301_residues
MMGFIDAQREHFGVESICKALQVAPSGYWRRAARRSNPALLPARAKGDAELVPQIERVWTSNLQVYGYRKVWRQMLREGT
AVARCTVERLMRLKGLQGARRGKKILTTVPDAKAPCPLDRVNRQFKADKPNQLWVSDFTYVSTWQGMVYVAFVVDVYARF
IVGWRVSRSMRTDFVLDALEQALYARKPERDGALIHHSDRGLQYVSIRYSERLAEAGIEPSVGSKGDSYDNALAETINGL
YKTELIHRRAPWKSKEAVELATLEWVSWFNHHRLMESLGYIPPAEAEANYHWQLAGQAMSV
>Mature_301_residues
MMGFIDAQREHFGVESICKALQVAPSGYWRRAARRSNPALLPARAKGDAELVPQIERVWTSNLQVYGYRKVWRQMLREGT
AVARCTVERLMRLKGLQGARRGKKILTTVPDAKAPCPLDRVNRQFKADKPNQLWVSDFTYVSTWQGMVYVAFVVDVYARF
IVGWRVSRSMRTDFVLDALEQALYARKPERDGALIHHSDRGLQYVSIRYSERLAEAGIEPSVGSKGDSYDNALAETINGL
YKTELIHRRAPWKSKEAVELATLEWVSWFNHHRLMESLGYIPPAEAEANYHWQLAGQAMSV

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=262, Percent_Identity=50.763358778626, Blast_Score=256, Evalue=1e-68,
Organism=Escherichia coli, GI1788405, Length=285, Percent_Identity=28.4210526315789, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1787263, Length=285, Percent_Identity=28.4210526315789, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1786753, Length=285, Percent_Identity=28.4210526315789, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1786570, Length=285, Percent_Identity=28.4210526315789, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1786490, Length=285, Percent_Identity=28.4210526315789, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1789981, Length=286, Percent_Identity=26.5734265734266, Blast_Score=110, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 34387; Mature: 34387

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGFIDAQREHFGVESICKALQVAPSGYWRRAARRSNPALLPARAKGDAELVPQIERVWT
CCCCCCCHHHHCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHH
SNLQVYGYRKVWRQMLREGTAVARCTVERLMRLKGLQGARRGKKILTTVPDAKAPCPLDR
CCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHCCCEEEEECCCCCCCCCHHH
VNRQFKADKPNQLWVSDFTYVSTWQGMVYVAFVVDVYARFIVGWRVSRSMRTDFVLDALE
HHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QALYARKPERDGALIHHSDRGLQYVSIRYSERLAEAGIEPSVGSKGDSYDNALAETINGL
HHHHHCCCCCCCCEEEECCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
YKTELIHRRAPWKSKEAVELATLEWVSWFNHHRLMESLGYIPPAEAEANYHWQLAGQAMS
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHC
V
C
>Mature Secondary Structure
MMGFIDAQREHFGVESICKALQVAPSGYWRRAARRSNPALLPARAKGDAELVPQIERVWT
CCCCCCCHHHHCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHH
SNLQVYGYRKVWRQMLREGTAVARCTVERLMRLKGLQGARRGKKILTTVPDAKAPCPLDR
CCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHCCCEEEEECCCCCCCCCHHH
VNRQFKADKPNQLWVSDFTYVSTWQGMVYVAFVVDVYARFIVGWRVSRSMRTDFVLDALE
HHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QALYARKPERDGALIHHSDRGLQYVSIRYSERLAEAGIEPSVGSKGDSYDNALAETINGL
HHHHHCCCCCCCCEEEECCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
YKTELIHRRAPWKSKEAVELATLEWVSWFNHHRLMESLGYIPPAEAEANYHWQLAGQAMS
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHC
V
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2159625; 2824781 [H]