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The map label for this gene is tnpA [H]

Identifier: 21243163

GI number: 21243163

Start: 2829046

End: 2830296

Strand: Reverse

Name: tnpA [H]

Synonym: XAC2430

Alternate gene names: 21243163

Gene position: 2830296-2829046 (Counterclockwise)

Preceding gene: 21243173

Following gene: 21243162

Centisome position: 54.69

GC content: 59.47

Gene sequence:

>1251_bases
GTGGCCGACGTGTTCCGCTATGTCAACGGTCAGTGTCAATTCTTGTCGGCGCTCACTCCGTTACAACCACGCTATGCGAA
GAAGGTGGCCGACGCTGACAGCCTGATGGCAGTCATCATTGCCCAGGCAATGAACCACGGCAATCTGGTCATGGCGCGTA
CCAGCGACATCCCGTACCACGTGCTGGAGAGCACCTACCAGCAATACCTACGGCAAGCATCGCTGCACGCGGCCAACGAC
TGCATCAGCAACGCCATCGCCGTGCTGCCGATCTTCCCGCATTACTCGTTCGACCTAGGCGCGCTGTACGGTGCAGTCGA
TGGCCAGAAATTCGGCGTCGAGCGGCCGACCGTGAAAGCGCGTTACTCGCGTAAATACTTCGGGCGCGGGAAAGGCGTGG
TCGCCTACACGCTGCTGTGCAACCACGTGCCGCTCAACGGCTACCTGATCGGCGCGCACGACTACGAGGCCCATCACGTA
TTCGACATCTGGTATCGCAACACGTCAGATATCGTGCCAACGGCGATTACTGGCGATATGCACAGCGTCAACAAGGCCAA
CTTCGCCATCCTGCACTGGTTCGGACTGCGCTTCGAGCCGCGCTTCACCGATTTGGACGCCCAATTGCAGGATCTGTACT
GCGCCGACGAACCGGCGTTGTACGAGACGTGCTTGATCCGACCGGTCGGCCAAATCGATCGGCAACTCATCGTCAGCGAG
AAGAGCAACATCGACCGGATCGTCGCCACGCTGGGCCTGAAGGAAATGACTCAGGGCACGCTGATCCGCAAGCTATGCAC
GTACACCGCGCCGAACCCGACACGGCGCGCCATCTTCGAGTTCGATAAGCTGGTGCGCAGCATCTACACATTGCGCTACC
TGCGCGACCCGCAACGGGAACGCAGCGTGCACCGCTCGCAGAATCGCATTGAGTCCTACCACCAGCTACGCTCGACCATC
GCCCAGGTCGGCGGCAAGAAGGAGCTGACCGGGCACACCGACATCGAAATCGAAATCAGCAACCAATGCGCACGGCTGAT
GGCCAACGCCATCATTTACTACAACTCGGCGATCCTGTCGCGGCTGTTGACGAAGTATGAGGCCAGCGGCAACGCCAAAG
CCGTGCTGCTGATTACGCAGATGTCGCCAGCGGCATGGCGGCATATTCTGCTGAACGGGCATTACACCTTCCAAAGTAAC
GGCAACTTGATCGATCTGGATGCGCTCGTGGCGGGGTTGGAATTGGGGTGA

Upstream 100 bases:

>100_bases
CAACTTCCGGGGAAAACTTCGGGGACTTCCTCATAGCTCCATTCTCAAACGAAGGAGCCTCCTCTAAAACCGGGGCGATT
CACAACTGCCATTTTGCGAC

Downstream 100 bases:

>100_bases
GGGGGACGGAATTTTCTGGGGTTCCGGCTTACATCCCCCAAACGCTCCATCGTCCCGGTAAACCCCGAAGGGGCAGTCCG
TCGCGTTGAATATTGGGGTG

Product: Tn5044 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MADVFRYVNGQCQFLSALTPLQPRYAKKVADADSLMAVIIAQAMNHGNLVMARTSDIPYHVLESTYQQYLRQASLHAAND
CISNAIAVLPIFPHYSFDLGALYGAVDGQKFGVERPTVKARYSRKYFGRGKGVVAYTLLCNHVPLNGYLIGAHDYEAHHV
FDIWYRNTSDIVPTAITGDMHSVNKANFAILHWFGLRFEPRFTDLDAQLQDLYCADEPALYETCLIRPVGQIDRQLIVSE
KSNIDRIVATLGLKEMTQGTLIRKLCTYTAPNPTRRAIFEFDKLVRSIYTLRYLRDPQRERSVHRSQNRIESYHQLRSTI
AQVGGKKELTGHTDIEIEISNQCARLMANAIIYYNSAILSRLLTKYEASGNAKAVLLITQMSPAAWRHILLNGHYTFQSN
GNLIDLDALVAGLELG

Sequences:

>Translated_416_residues
MADVFRYVNGQCQFLSALTPLQPRYAKKVADADSLMAVIIAQAMNHGNLVMARTSDIPYHVLESTYQQYLRQASLHAAND
CISNAIAVLPIFPHYSFDLGALYGAVDGQKFGVERPTVKARYSRKYFGRGKGVVAYTLLCNHVPLNGYLIGAHDYEAHHV
FDIWYRNTSDIVPTAITGDMHSVNKANFAILHWFGLRFEPRFTDLDAQLQDLYCADEPALYETCLIRPVGQIDRQLIVSE
KSNIDRIVATLGLKEMTQGTLIRKLCTYTAPNPTRRAIFEFDKLVRSIYTLRYLRDPQRERSVHRSQNRIESYHQLRSTI
AQVGGKKELTGHTDIEIEISNQCARLMANAIIYYNSAILSRLLTKYEASGNAKAVLLITQMSPAAWRHILLNGHYTFQSN
GNLIDLDALVAGLELG
>Mature_415_residues
ADVFRYVNGQCQFLSALTPLQPRYAKKVADADSLMAVIIAQAMNHGNLVMARTSDIPYHVLESTYQQYLRQASLHAANDC
ISNAIAVLPIFPHYSFDLGALYGAVDGQKFGVERPTVKARYSRKYFGRGKGVVAYTLLCNHVPLNGYLIGAHDYEAHHVF
DIWYRNTSDIVPTAITGDMHSVNKANFAILHWFGLRFEPRFTDLDAQLQDLYCADEPALYETCLIRPVGQIDRQLIVSEK
SNIDRIVATLGLKEMTQGTLIRKLCTYTAPNPTRRAIFEFDKLVRSIYTLRYLRDPQRERSVHRSQNRIESYHQLRSTIA
QVGGKKELTGHTDIEIEISNQCARLMANAIIYYNSAILSRLLTKYEASGNAKAVLLITQMSPAAWRHILLNGHYTFQSNG
NLIDLDALVAGLELG

Specific function: Required for transposition of transposon Tn3 [H]

COG id: COG4644

COG function: function code L; Transposase and inactivated derivatives, TnpA family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 7 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002513 [H]

Pfam domain/function: PF01526 Transposase_7 [H]

EC number: NA

Molecular weight: Translated: 46892; Mature: 46761

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADVFRYVNGQCQFLSALTPLQPRYAKKVADADSLMAVIIAQAMNHGNLVMARTSDIPYH
CCCHHHHHCCCHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCHH
VLESTYQQYLRQASLHAANDCISNAIAVLPIFPHYSFDLGALYGAVDGQKFGVERPTVKA
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCHHH
RYSRKYFGRGKGVVAYTLLCNHVPLNGYLIGAHDYEAHHVFDIWYRNTSDIVPTAITGDM
HHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCEEECCCC
HSVNKANFAILHWFGLRFEPRFTDLDAQLQDLYCADEPALYETCLIRPVGQIDRQLIVSE
CCCCCCCEEEEEEECCEECCCCCCCCHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHC
KSNIDRIVATLGLKEMTQGTLIRKLCTYTAPNPTRRAIFEFDKLVRSIYTLRYLRDPQRE
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
RSVHRSQNRIESYHQLRSTIAQVGGKKELTGHTDIEIEISNQCARLMANAIIYYNSAILS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH
RLLTKYEASGNAKAVLLITQMSPAAWRHILLNGHYTFQSNGNLIDLDALVAGLELG
HHHHHHCCCCCCEEEEEEEECCHHHHHEEEEECEEEECCCCCEEEHHHHHHHCCCC
>Mature Secondary Structure 
ADVFRYVNGQCQFLSALTPLQPRYAKKVADADSLMAVIIAQAMNHGNLVMARTSDIPYH
CCHHHHHCCCHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCHH
VLESTYQQYLRQASLHAANDCISNAIAVLPIFPHYSFDLGALYGAVDGQKFGVERPTVKA
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCHHH
RYSRKYFGRGKGVVAYTLLCNHVPLNGYLIGAHDYEAHHVFDIWYRNTSDIVPTAITGDM
HHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCEEECCCC
HSVNKANFAILHWFGLRFEPRFTDLDAQLQDLYCADEPALYETCLIRPVGQIDRQLIVSE
CCCCCCCEEEEEEECCEECCCCCCCCHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHC
KSNIDRIVATLGLKEMTQGTLIRKLCTYTAPNPTRRAIFEFDKLVRSIYTLRYLRDPQRE
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
RSVHRSQNRIESYHQLRSTIAQVGGKKELTGHTDIEIEISNQCARLMANAIIYYNSAILS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH
RLLTKYEASGNAKAVLLITQMSPAAWRHILLNGHYTFQSNGNLIDLDALVAGLELG
HHHHHHCCCCCCEEEEEEEECCHHHHHEEEEECEEEECCCCCEEEHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 391406 [H]