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The map label for this gene is 21243109

Identifier: 21243109

GI number: 21243109

Start: 2769090

End: 2769779

Strand: Reverse

Name: 21243109

Synonym: XAC2375

Alternate gene names: NA

Gene position: 2769779-2769090 (Counterclockwise)

Preceding gene: 21243110

Following gene: 21243106

Centisome position: 53.52

GC content: 70.0

Gene sequence:

>690_bases
ATGAGCCAATCCAGCGCCCTCGACAGTTTTCTCAACAAGTGGGCAACCCGCTGGCCGGAATGGTCGGTTGCCGAACCGTT
CGTGCCCGAGCCGCAACGCCGCCTGGCCGTTGCCTGGTTCGCGTTGCTGCAGGAATGGGAAGACATCATGAATATCGCCG
GCGACCCGTTGCCGGCCGATGCCAAGCTGGCGTGGTGGCAGCAGGAGCTGCGTGACTGGTCGAGCCAGCGCTCGCGGCAT
CCGTTGGGGCGCGTGCTTGAGCCGGTCCGTGCGCCGTGGTCACAGCTGGCCGACGCCTTGCCGGCCATGCAGGCCGCACG
CGTCCAGCCGCAATCGCTGCAGCACGCGCTAGGGGCATTGCGCACGTTCGCCGAGGCGGTGGTTGCGGTGGAAGCGGTGC
TGTTCGCACGGGCGCGGCCTGGCGATGCCACTGCGGTGGCGGTGCAATGGCTGGATGCACGCCAACGCGTGGCCGGCGAC
GGCGCAGCGCCGGGCGATATCGCCACGCCCGCCTGGCGCTCGCAGCTGTTGCAGGCCTGGCCGCGCAAAGTCGCCTTGGC
ACGGCCGCACCGGGTGTGGTCGCGTCTGGCACGGCTGCGCTTGCAGCGCGAGCTGGCGGGCAAGCCCGCGTACCCACCGC
CGATGCAACAGCTCTGGCATTGCTGGCGTGCTGCCAGCGGCGCGGACTGA

Upstream 100 bases:

>100_bases
CGCTGGCAGGCCGATGTACTGGTCGAGCGGCCGCAGGCGCTCTGGAATCCGGCAACGTGGCCGCAGATCTGATCCTTCTT
CGTATTTTTCTGGACCCGCC

Downstream 100 bases:

>100_bases
GCGCAAGCGATACGGCCGCATGGCCGCAACGTGCAAGCGCACTAGTGTGTCCTGCGGGCTGCCGGACAGACCCGTTGCAT
TGTTGGGTTTGGACCGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSQSSALDSFLNKWATRWPEWSVAEPFVPEPQRRLAVAWFALLQEWEDIMNIAGDPLPADAKLAWWQQELRDWSSQRSRH
PLGRVLEPVRAPWSQLADALPAMQAARVQPQSLQHALGALRTFAEAVVAVEAVLFARARPGDATAVAVQWLDARQRVAGD
GAAPGDIATPAWRSQLLQAWPRKVALARPHRVWSRLARLRLQRELAGKPAYPPPMQQLWHCWRAASGAD

Sequences:

>Translated_229_residues
MSQSSALDSFLNKWATRWPEWSVAEPFVPEPQRRLAVAWFALLQEWEDIMNIAGDPLPADAKLAWWQQELRDWSSQRSRH
PLGRVLEPVRAPWSQLADALPAMQAARVQPQSLQHALGALRTFAEAVVAVEAVLFARARPGDATAVAVQWLDARQRVAGD
GAAPGDIATPAWRSQLLQAWPRKVALARPHRVWSRLARLRLQRELAGKPAYPPPMQQLWHCWRAASGAD
>Mature_228_residues
SQSSALDSFLNKWATRWPEWSVAEPFVPEPQRRLAVAWFALLQEWEDIMNIAGDPLPADAKLAWWQQELRDWSSQRSRHP
LGRVLEPVRAPWSQLADALPAMQAARVQPQSLQHALGALRTFAEAVVAVEAVLFARARPGDATAVAVQWLDARQRVAGDG
AAPGDIATPAWRSQLLQAWPRKVALARPHRVWSRLARLRLQRELAGKPAYPPPMQQLWHCWRAASGAD

Specific function: Unknown

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25717; Mature: 25585

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSSALDSFLNKWATRWPEWSVAEPFVPEPQRRLAVAWFALLQEWEDIMNIAGDPLPAD
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
AKLAWWQQELRDWSSQRSRHPLGRVLEPVRAPWSQLADALPAMQAARVQPQSLQHALGAL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RTFAEAVVAVEAVLFARARPGDATAVAVQWLDARQRVAGDGAAPGDIATPAWRSQLLQAW
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
PRKVALARPHRVWSRLARLRLQRELAGKPAYPPPMQQLWHCWRAASGAD
HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SQSSALDSFLNKWATRWPEWSVAEPFVPEPQRRLAVAWFALLQEWEDIMNIAGDPLPAD
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
AKLAWWQQELRDWSSQRSRHPLGRVLEPVRAPWSQLADALPAMQAARVQPQSLQHALGAL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RTFAEAVVAVEAVLFARARPGDATAVAVQWLDARQRVAGDGAAPGDIATPAWRSQLLQAW
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
PRKVALARPHRVWSRLARLRLQRELAGKPAYPPPMQQLWHCWRAASGAD
HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA