| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is tetV [C]
Identifier: 21243090
GI number: 21243090
Start: 2751427
End: 2752677
Strand: Direct
Name: tetV [C]
Synonym: XAC2356
Alternate gene names: 21243090
Gene position: 2751427-2752677 (Clockwise)
Preceding gene: 21243089
Following gene: 21243092
Centisome position: 53.16
GC content: 68.75
Gene sequence:
>1251_bases GTGAGCACGCCCGCCCCGTCGCCCGCCGATTCGCTGCGGACGCTGCTTGCCCATCCAGGCTTCGGCCTGGTGCTGCTCTA CCGCGTGGCGGCGATGCTGTCCTACCAGATCGTCGCCGTGACGGTCGGTTGGCATATCTACGAAATTACCGGCAACCCGC TCTCGCTGGGGCTGATCGGCCTGGCCGAAATCCTGCCGTTCTTCTGCATCGCCCCCTTCGCCGGCTATCTGGTCGATCAC CTGCCGCGCCGCCGGCTGGGCATGGTCGCCGTGCTGGGTTTGGTCGCGACCGCGCTGCTGCTGTTGGCGATCACGCAAGG CTGGCTGCCCGTCGAAGGCGTGTGGCCGATCTATGCCGCCATCTCGCTCACCGGCGCGGCGCGCTCTTTCTTGTCGCCGG TCTACAACGCCTTGTTCGCACGGGCGCTGCCTCGCGAGGCATTCGCGCGCGGTGCCAGCATCGGCAGCGTCACCTTCCAG GCCGGCATGGTGATCGGCCCGGCGCTGGGCGGTGTGCTGGTCGGCTGGGGCGGCAAGGGCCTGGCCTACGGGGTCGCCGC CAGCGTGGCGATGCTGGCGATCCTGGCGTTGGCACTGCTGCGTGTCAGCGAGCCGGTCAGCGAGGGCCCACGTGCGCCGA TCTTCCGCAGCATCGCCGAAGGCGCGCAGTTCGTACTGTCCAACCAGATCATGCTGGGCGCGATGGCGCTGGACATGTTT TCGGTACTGCTCGGCGGCGCGGTATCGATGTTGCCGGCCTTCATCCACGACATCCTGCACTACGGCCCCGAAGGCCTGGG CATCCTGCGCGGCGCGCCGGCGCTGGGTTCGATCGTGGTTGGCGTGTGGCTGGCGCGGCACCCGCTGCAGCGCAATGCCG GACGCGTCCTGCTGCTGTCGGTGGCCGGCTTCGGACTCTGCACCATCGCCTTCGGACTGTCGCGCCATTTCTGGCTGTCC GCTGCAATCCTGCTGGTGTACGGCATGTGCGACGGCGTCTCGGTGGTGGTGCGCCAGACCATCCTGCAGCTGGCCACCCC CGATGCCATGCGTGGCCGGGTGTCTTCGATCAACGGCATCTTCATCGGCTCGTCCAACGAGCTGGGCGCGTTCTACGACG GCGTCATGGCGCGCCTGGTCGGCCTGGTGCCGGCGGTGGTCATCGGCGGCTGTGTCACCCTGGGCGTGGTGGCCACCACC GCCTGGAAGGCGCCGCGCCTGCGCAAGCTGGACCTGCGCGATCTGCAGTGA
Upstream 100 bases:
>100_bases ACATCGCCGGAATCGGCCTGGCCAAGCATCTGTCGCCGACCCGCAGCAACGGCGTGGCGGCGATGCTGGCCTTCATCCGC GATACCGCGCGCGCGCAGCA
Downstream 100 bases:
>100_bases GCTGCGCGATCGCGCGTGATTGCCTGCCCACAGCGCCGCTGCGGTGCGAAGGTGTTCGAGCTGCGGGCCGCAGTCACGTG CCGCCACGCAGCTGCGTGCG
Product: drug:proton antiporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; MFS Permease; DrugProton Antiporter; Facilitator Superfamily Transporter; Membrane Transporter; Transporter Facilitator Family; Transmembrane Protein; Permease Of Facilitator Superfamily; Facilitator Superfamily Transporter Permease; MFS Family Transporter; Facilitator Superfamily Multidrug Resistance Protein; Facilitator Superfamily; Facilitator MFS1 Protein; Permease Facilitator Superfamily; Siderophore Export Protein; Macrolide-Efflux Protein; Integral Membrane Protein; Permease Protein; Permeases Of Facilitator Superfamily; Permease MDR ; Facilitator Superfamily Transmembrane Transporter; Arabinose Efflux Permease; Permease Of Facilitator Superfamily Protein; Drug Proton Antiporter; Integral Membrane Protein MFS Transporter; Membrame Protein; DrugH+ Antiporter; Facilitator Family Transporter; Drug Resistance Efflux Protein; Facilitator Family Protein; Facilitator Superfamily Transporter Transporter
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MSTPAPSPADSLRTLLAHPGFGLVLLYRVAAMLSYQIVAVTVGWHIYEITGNPLSLGLIGLAEILPFFCIAPFAGYLVDH LPRRRLGMVAVLGLVATALLLLAITQGWLPVEGVWPIYAAISLTGAARSFLSPVYNALFARALPREAFARGASIGSVTFQ AGMVIGPALGGVLVGWGGKGLAYGVAASVAMLAILALALLRVSEPVSEGPRAPIFRSIAEGAQFVLSNQIMLGAMALDMF SVLLGGAVSMLPAFIHDILHYGPEGLGILRGAPALGSIVVGVWLARHPLQRNAGRVLLLSVAGFGLCTIAFGLSRHFWLS AAILLVYGMCDGVSVVVRQTILQLATPDAMRGRVSSINGIFIGSSNELGAFYDGVMARLVGLVPAVVIGGCVTLGVVATT AWKAPRLRKLDLRDLQ
Sequences:
>Translated_416_residues MSTPAPSPADSLRTLLAHPGFGLVLLYRVAAMLSYQIVAVTVGWHIYEITGNPLSLGLIGLAEILPFFCIAPFAGYLVDH LPRRRLGMVAVLGLVATALLLLAITQGWLPVEGVWPIYAAISLTGAARSFLSPVYNALFARALPREAFARGASIGSVTFQ AGMVIGPALGGVLVGWGGKGLAYGVAASVAMLAILALALLRVSEPVSEGPRAPIFRSIAEGAQFVLSNQIMLGAMALDMF SVLLGGAVSMLPAFIHDILHYGPEGLGILRGAPALGSIVVGVWLARHPLQRNAGRVLLLSVAGFGLCTIAFGLSRHFWLS AAILLVYGMCDGVSVVVRQTILQLATPDAMRGRVSSINGIFIGSSNELGAFYDGVMARLVGLVPAVVIGGCVTLGVVATT AWKAPRLRKLDLRDLQ >Mature_415_residues STPAPSPADSLRTLLAHPGFGLVLLYRVAAMLSYQIVAVTVGWHIYEITGNPLSLGLIGLAEILPFFCIAPFAGYLVDHL PRRRLGMVAVLGLVATALLLLAITQGWLPVEGVWPIYAAISLTGAARSFLSPVYNALFARALPREAFARGASIGSVTFQA GMVIGPALGGVLVGWGGKGLAYGVAASVAMLAILALALLRVSEPVSEGPRAPIFRSIAEGAQFVLSNQIMLGAMALDMFS VLLGGAVSMLPAFIHDILHYGPEGLGILRGAPALGSIVVGVWLARHPLQRNAGRVLLLSVAGFGLCTIAFGLSRHFWLSA AILLVYGMCDGVSVVVRQTILQLATPDAMRGRVSSINGIFIGSSNELGAFYDGVMARLVGLVPAVVIGGCVTLGVVATTA WKAPRLRKLDLRDLQ
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786806, Length=361, Percent_Identity=26.8698060941828, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43537; Mature: 43406
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPAPSPADSLRTLLAHPGFGLVLLYRVAAMLSYQIVAVTVGWHIYEITGNPLSLGLIG CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEECEEEEEEECCCHHHHHHH LAEILPFFCIAPFAGYLVDHLPRRRLGMVAVLGLVATALLLLAITQGWLPVEGVWPIYAA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH ISLTGAARSFLSPVYNALFARALPREAFARGASIGSVTFQAGMVIGPALGGVLVGWGGKG HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHCCCEEHHHHCCEEEECCCCH LAYGVAASVAMLAILALALLRVSEPVSEGPRAPIFRSIAEGAQFVLSNQIMLGAMALDMF HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVLLGGAVSMLPAFIHDILHYGPEGLGILRGAPALGSIVVGVWLARHPLQRNAGRVLLLS HHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHCCHHCCCCCEEEEE VAGFGLCTIAFGLSRHFWLSAAILLVYGMCDGVSVVVRQTILQLATPDAMRGRVSSINGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCHHHCCCEE FIGSSNELGAFYDGVMARLVGLVPAVVIGGCVTLGVVATTAWKAPRLRKLDLRDLQ EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure STPAPSPADSLRTLLAHPGFGLVLLYRVAAMLSYQIVAVTVGWHIYEITGNPLSLGLIG CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEECEEEEEEECCCHHHHHHH LAEILPFFCIAPFAGYLVDHLPRRRLGMVAVLGLVATALLLLAITQGWLPVEGVWPIYAA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH ISLTGAARSFLSPVYNALFARALPREAFARGASIGSVTFQAGMVIGPALGGVLVGWGGKG HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHCCCEEHHHHCCEEEECCCCH LAYGVAASVAMLAILALALLRVSEPVSEGPRAPIFRSIAEGAQFVLSNQIMLGAMALDMF HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVLLGGAVSMLPAFIHDILHYGPEGLGILRGAPALGSIVVGVWLARHPLQRNAGRVLLLS HHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHCCHHCCCCCEEEEE VAGFGLCTIAFGLSRHFWLSAAILLVYGMCDGVSVVVRQTILQLATPDAMRGRVSSINGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCHHHCCCEE FIGSSNELGAFYDGVMARLVGLVPAVVIGGCVTLGVVATTAWKAPRLRKLDLRDLQ EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA