| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is argC
Identifier: 21243080
GI number: 21243080
Start: 2741538
End: 2742488
Strand: Reverse
Name: argC
Synonym: XAC2346
Alternate gene names: 21243080
Gene position: 2742488-2741538 (Counterclockwise)
Preceding gene: 21243081
Following gene: 21243079
Centisome position: 52.99
GC content: 64.46
Gene sequence:
>951_bases ATGACTGTTCAACCAAAGACCATCGGCATTGTCGGCGCCCGCGGGCATACCGGCTCGGAATTGATCAAACTGGTTGCGGC GCACCCGCAGCTGCACTTGAGCTTCGTGTCCTCGCGCGAGCTGGCCGGGCAGCGCGTGGCCGAGCATAACGATGCCTACC AGGGGCAGTTGCGCTACGAGAACCTGGATGCCGACGCGGTGGCCGTCAAGGCTGCCGACGTGGTGATCCTGGCGCTGCCC AATGGCAAGGCAGCGCCCTTCGTCGCCGCGATCGACGCAGCAACGCCGCAGACGCTGGTGATCGATCTGTCGGCAGACTA TCGCTTCGATCCGGCCTGGTACTACGGCTTGCCTGAGCTGACGCGCGGCAGCTACGCCGGACAAAGACGCATCAGCAACC CGGGCTGTTATGCCACCGCGATGCAGCTGACCATCGCGCCACTGCTCGACCAGTTGGCCGGGCCGCCGCAGTGTTTCGGC GTCTCCGGGTATTCGGGCGCGGGTACCACGCCCTCGGACAAGAACAACCCCGAGTTGCTCTCCAATAATTTGATGCCGTA TGCGCTGACCAACCACATGCACGAGCGCGAGGTGTCTGCGCAGCTCGGCGTGCCGGTGGAGTTCATGCCGCACGTGGCGC CGCATTTCCGCGGCATCACCATGACCGTCAATCTGTGGCTGCAGCAGCCGCTGACGCGCGAGCAGATCCAGGCGCGTTAT ACGCAGCGTTATGCCGACGAGCCGTTGATCGAGATCGTCGACGAAGCGCCTTGGGTGAGCCGCATCGCCGGCAAGCACGG TGTGCAGATTGGCGGGGTGACGCTGGCGCCCGGCAACAAGCGCGTGGTGGTGGTGGCGACGCTGGACAACCTGCTCAAGG GTGCAGCGACGCAGGCGATGCAGAACCTCAACCTGGCGCTGGGCTGGGACGAGTTGATGGCAATTCGTTGA
Upstream 100 bases:
>100_bases ACGCCGACGGTACGCTGCGCGATACCGTGGTGTTTTCCATCATCGATACGGAATGGGCAGGGGTTAAACGCCACCTGCAG TTCCGCCTGGAAGCAAACGC
Downstream 100 bases:
>100_bases TGCGAGTCCCTCGCAAGAGCCTGCACATCCCTGTGCAGGGATTTAACGATGCGAGTCCCTCGCAACAGCCCGCACATCCC TGTGCAGGGATTTAACGATG
Product: N-acetyl-gamma-glutamyl-phosphate reductase
Products: NA
Alternate protein names: AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MTVQPKTIGIVGARGHTGSELIKLVAAHPQLHLSFVSSRELAGQRVAEHNDAYQGQLRYENLDADAVAVKAADVVILALP NGKAAPFVAAIDAATPQTLVIDLSADYRFDPAWYYGLPELTRGSYAGQRRISNPGCYATAMQLTIAPLLDQLAGPPQCFG VSGYSGAGTTPSDKNNPELLSNNLMPYALTNHMHEREVSAQLGVPVEFMPHVAPHFRGITMTVNLWLQQPLTREQIQARY TQRYADEPLIEIVDEAPWVSRIAGKHGVQIGGVTLAPGNKRVVVVATLDNLLKGAATQAMQNLNLALGWDELMAIR
Sequences:
>Translated_316_residues MTVQPKTIGIVGARGHTGSELIKLVAAHPQLHLSFVSSRELAGQRVAEHNDAYQGQLRYENLDADAVAVKAADVVILALP NGKAAPFVAAIDAATPQTLVIDLSADYRFDPAWYYGLPELTRGSYAGQRRISNPGCYATAMQLTIAPLLDQLAGPPQCFG VSGYSGAGTTPSDKNNPELLSNNLMPYALTNHMHEREVSAQLGVPVEFMPHVAPHFRGITMTVNLWLQQPLTREQIQARY TQRYADEPLIEIVDEAPWVSRIAGKHGVQIGGVTLAPGNKRVVVVATLDNLLKGAATQAMQNLNLALGWDELMAIR >Mature_315_residues TVQPKTIGIVGARGHTGSELIKLVAAHPQLHLSFVSSRELAGQRVAEHNDAYQGQLRYENLDADAVAVKAADVVILALPN GKAAPFVAAIDAATPQTLVIDLSADYRFDPAWYYGLPELTRGSYAGQRRISNPGCYATAMQLTIAPLLDQLAGPPQCFGV SGYSGAGTTPSDKNNPELLSNNLMPYALTNHMHEREVSAQLGVPVEFMPHVAPHFRGITMTVNLWLQQPLTREQIQARYT QRYADEPLIEIVDEAPWVSRIAGKHGVQIGGVTLAPGNKRVVVVATLDNLLKGAATQAMQNLNLALGWDELMAIR
Specific function: Arginine biosynthesis; third step. [C]
COG id: COG0002
COG function: function code E; Acetylglutamate semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAGSA dehydrogenase family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1790396, Length=339, Percent_Identity=30.0884955752212, Blast_Score=119, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6320913, Length=323, Percent_Identity=47.0588235294118, Blast_Score=295, Evalue=5e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARGC_XANAC (Q8PK31)
Other databases:
- EMBL: AE008923 - RefSeq: NP_642662.1 - ProteinModelPortal: Q8PK31 - SMR: Q8PK31 - GeneID: 1156417 - GenomeReviews: AE008923_GR - KEGG: xac:XAC2346 - NMPDR: fig|190486.1.peg.2306 - HOGENOM: HBG294213 - OMA: VCRIAVH - ProtClustDB: PRK00436 - BioCyc: XAXO190486:XAC2346-MONOMER - BRENDA: 1.2.1.38 - GO: GO:0005737 - HAMAP: MF_00150 - InterPro: IPR023013 - InterPro: IPR000706 - InterPro: IPR016040 - InterPro: IPR000534 - Gene3D: G3DSA:3.40.50.720 - SMART: SM00859 - TIGRFAMs: TIGR01850
Pfam domain/function: PF01118 Semialdhyde_dh
EC number: =1.2.1.38
Molecular weight: Translated: 34190; Mature: 34059
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: PS01224 ARGC
Important sites: ACT_SITE 136-136
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVQPKTIGIVGARGHTGSELIKLVAAHPQLHLSFVSSRELAGQRVAEHNDAYQGQLRYE CCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCCCEEEEC NLDADAVAVKAADVVILALPNGKAAPFVAAIDAATPQTLVIDLSADYRFDPAWYYGLPEL CCCCCEEEEEEEEEEEEECCCCCCCCEEEEECCCCCCEEEEEECCCCEECCCEECCCCHH TRGSYAGQRRISNPGCYATAMQLTIAPLLDQLAGPPQCFGVSGYSGAGTTPSDKNNPELL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCHHHH SNNLMPYALTNHMHEREVSAQLGVPVEFMPHVAPHFRGITMTVNLWLQQPLTREQIQARY HCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHCCEEEEEEEEECCCCCHHHHHHHH TQRYADEPLIEIVDEAPWVSRIAGKHGVQIGGVTLAPGNKRVVVVATLDNLLKGAATQAM HHHHCCCHHHHHHHCCCHHHHHHCCCCEEECCEEECCCCCEEEEEEEHHHHHHHHHHHHH QNLNLALGWDELMAIR HHCCEEECHHHHHCCC >Mature Secondary Structure TVQPKTIGIVGARGHTGSELIKLVAAHPQLHLSFVSSRELAGQRVAEHNDAYQGQLRYE CCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCCCEEEEC NLDADAVAVKAADVVILALPNGKAAPFVAAIDAATPQTLVIDLSADYRFDPAWYYGLPEL CCCCCEEEEEEEEEEEEECCCCCCCCEEEEECCCCCCEEEEEECCCCEECCCEECCCCHH TRGSYAGQRRISNPGCYATAMQLTIAPLLDQLAGPPQCFGVSGYSGAGTTPSDKNNPELL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCHHHH SNNLMPYALTNHMHEREVSAQLGVPVEFMPHVAPHFRGITMTVNLWLQQPLTREQIQARY HCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHCCEEEEEEEEECCCCCHHHHHHHH TQRYADEPLIEIVDEAPWVSRIAGKHGVQIGGVTLAPGNKRVVVVATLDNLLKGAATQAM HHHHCCCHHHHHHHCCCHHHHHHCCCCEEECCEEECCCCCEEEEEEEHHHHHHHHHHHHH QNLNLALGWDELMAIR HHCCEEECHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217