| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yciI [H]
Identifier: 21243050
GI number: 21243050
Start: 2709191
End: 2709490
Strand: Reverse
Name: yciI [H]
Synonym: XAC2315
Alternate gene names: 21243050
Gene position: 2709490-2709191 (Counterclockwise)
Preceding gene: 21243054
Following gene: 21243049
Centisome position: 52.35
GC content: 69.67
Gene sequence:
>300_bases GTGTGGTACGTAATCGAGGGGTATGACCGGCCGGACGCATTGGCGGCACGGCAGCAGGCGCGGCCGGCGCATCTGGCGCG TCTGCAGGAACTTGCGGCCGCCGGGCGATTGCTGGTGGCGGGCCCGTGCCCGGCCATCGACGCCGAAGATCCGGGTCCGG CCGGTTTCAGCGGCAGCGTCGTAATTGCCGAGTTCGACGCTCTGGACGAGGCGCGCGCCTGGGCAGATGCCGACCCCTAT GTGGAAGCGGGTGTGTACACGCGCACCGAGGTCCGGCCGTTCCGCCGGGTATTGCCATGA
Upstream 100 bases:
>100_bases GTGCAGTGGTGCCAAGGGTAATGCGTGCGCGGGGGCGGTGTCCAGCGCCGACGCGGCTAGAATCAGCGCGGTGATCTTCC AGTCTTAGGCGAGGTGGCGT
Downstream 100 bases:
>100_bases GCCGGGTCGACCAGATCCGCGCAGCGTTGCAGGCGGCACTGGCGCCCACCGAGCTGGATGTCGACGACGACAGTGCGCGG CATGCAGGCCACGCCGGTGC
Product: YciI-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MWYVIEGYDRPDALAARQQARPAHLARLQELAAAGRLLVAGPCPAIDAEDPGPAGFSGSVVIAEFDALDEARAWADADPY VEAGVYTRTEVRPFRRVLP
Sequences:
>Translated_99_residues MWYVIEGYDRPDALAARQQARPAHLARLQELAAAGRLLVAGPCPAIDAEDPGPAGFSGSVVIAEFDALDEARAWADADPY VEAGVYTRTEVRPFRRVLP >Mature_99_residues MWYVIEGYDRPDALAARQQARPAHLARLQELAAAGRLLVAGPCPAIDAEDPGPAGFSGSVVIAEFDALDEARAWADADPY VEAGVYTRTEVRPFRRVLP
Specific function: Unknown
COG id: COG2350
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yciI family [H]
Homologues:
Organism=Escherichia coli, GI87081861, Length=98, Percent_Identity=61.2244897959184, Blast_Score=126, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011008 - InterPro: IPR005545 [H]
Pfam domain/function: PF03795 YCII [H]
EC number: NA
Molecular weight: Translated: 10736; Mature: 10736
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWYVIEGYDRPDALAARQQARPAHLARLQELAAAGRLLVAGPCPAIDAEDPGPAGFSGSV CEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCE VIAEFDALDEARAWADADPYVEAGVYTRTEVRPFRRVLP EEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCC >Mature Secondary Structure MWYVIEGYDRPDALAARQQARPAHLARLQELAAAGRLLVAGPCPAIDAEDPGPAGFSGSV CEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCE VIAEFDALDEARAWADADPYVEAGVYTRTEVRPFRRVLP EEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]