| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is galU [H]
Identifier: 21243027
GI number: 21243027
Start: 2682152
End: 2683045
Strand: Reverse
Name: galU [H]
Synonym: XAC2292
Alternate gene names: 21243027
Gene position: 2683045-2682152 (Counterclockwise)
Preceding gene: 21243028
Following gene: 21243026
Centisome position: 51.84
GC content: 61.86
Gene sequence:
>894_bases ATGAGCCAGCGTATTCGCAAGGCCGTATTCCCCGTCGCAGGTCTTGGGACCCGCTTTCTTCCGGCAACCAAGACAGTGCC GAAAGAAATGCTGCCAATCATCGACAAGCCATTGATTCAGTACGCCGTCGACGAAGCCATCCAGGCTGGTTGCGATACGC TGATCTTCGTGACCAACCGCTATAAGCACTCCATCGCCGACTACTTCGACAAGGCCTATGAGCTCGAGCAGAAGCTGGAG CGTGCAGGCAAGCTGGAGCAGCTGGAGCTTGTGCGCCATGCGCTGCCGGACGGCGTTCGCGCCATTTTTGTGACGCAGGC GGAAGCGCTGGGTCTGGGTCATGCAGTGCTGTGTGCCAAGGCCGTTGTCGGTAACGAACCGTTCGCGGTGTTGCTGCCGG ACGATCTGATGTGGAACCGCGGTGATGCTGCGCTGACCCAGATGGCCAACGTGGCGGAAGCCTCGGGCGGCAGCGTGATC GCCGTGGAAGACGTGCCGCACGACAAGACCGCCAGCTACGGCATCGTTTCCACCGACGCATTCGACGGCCGCAAGGGCCG CATCAACGCGATCGTCGAAAAGCCCAAGCCGGAAGTCGCGCCAAGCAACCTGGCCGTGGTCGGTCGTTACGTGCTGAGCC CCAAGATCTTCGACCTGCTCGAAGCCACCGGTGCAGGCGCAGGCGGCGAAATCCAGCTCACCGATGCGATCGCCGAATTG CTGAAGGAAGAGCAGGTCGATGCCTTCCGCTTCGAGGGTCGCCGTTTCGATTGCGGCGCGCATATCGGCCTGATCGAAGC CACCGTGCATTTTGCGCTCGAGCACGAAAAGCATGGCGGCCCAGCGAAGGAAATCCTGCGCGAAGCACTGGCCCAGGCCG ACGTGCGCGGCTGA
Upstream 100 bases:
>100_bases TGGGCAGCCTGATGCCGGATTTCGCGGCTGCTCGACGGAAAGTCGACGCGCGATCTGATACGGTCGTTCCATTCCCCGCA CGTGAGGTCAGAAGACTGTA
Downstream 100 bases:
>100_bases TTGTTGCCTGATCGCTGTTTCTACGAACGACGCCAGCTGGCGTCGTTCGTCGTTTGGGAGCTTGTCGTACGCGTTGTCGC GTCTGCAGAGCTCGGCTTGG
Product: UTP-glucose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSQRIRKAVFPVAGLGTRFLPATKTVPKEMLPIIDKPLIQYAVDEAIQAGCDTLIFVTNRYKHSIADYFDKAYELEQKLE RAGKLEQLELVRHALPDGVRAIFVTQAEALGLGHAVLCAKAVVGNEPFAVLLPDDLMWNRGDAALTQMANVAEASGGSVI AVEDVPHDKTASYGIVSTDAFDGRKGRINAIVEKPKPEVAPSNLAVVGRYVLSPKIFDLLEATGAGAGGEIQLTDAIAEL LKEEQVDAFRFEGRRFDCGAHIGLIEATVHFALEHEKHGGPAKEILREALAQADVRG
Sequences:
>Translated_297_residues MSQRIRKAVFPVAGLGTRFLPATKTVPKEMLPIIDKPLIQYAVDEAIQAGCDTLIFVTNRYKHSIADYFDKAYELEQKLE RAGKLEQLELVRHALPDGVRAIFVTQAEALGLGHAVLCAKAVVGNEPFAVLLPDDLMWNRGDAALTQMANVAEASGGSVI AVEDVPHDKTASYGIVSTDAFDGRKGRINAIVEKPKPEVAPSNLAVVGRYVLSPKIFDLLEATGAGAGGEIQLTDAIAEL LKEEQVDAFRFEGRRFDCGAHIGLIEATVHFALEHEKHGGPAKEILREALAQADVRG >Mature_296_residues SQRIRKAVFPVAGLGTRFLPATKTVPKEMLPIIDKPLIQYAVDEAIQAGCDTLIFVTNRYKHSIADYFDKAYELEQKLER AGKLEQLELVRHALPDGVRAIFVTQAEALGLGHAVLCAKAVVGNEPFAVLLPDDLMWNRGDAALTQMANVAEASGGSVIA VEDVPHDKTASYGIVSTDAFDGRKGRINAIVEKPKPEVAPSNLAVVGRYVLSPKIFDLLEATGAGAGGEIQLTDAIAELL KEEQVDAFRFEGRRFDCGAHIGLIEATVHFALEHEKHGGPAKEILREALAQADVRG
Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. a glycolipid found in the membrane, which is also used as a membrane anchor for lipote
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=299, Percent_Identity=47.1571906354515, Blast_Score=244, Evalue=4e-66, Organism=Escherichia coli, GI1788355, Length=297, Percent_Identity=42.0875420875421, Blast_Score=221, Evalue=6e-59, Organism=Escherichia coli, GI1788351, Length=285, Percent_Identity=26.3157894736842, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI1790224, Length=278, Percent_Identity=25.8992805755396, Blast_Score=75, Evalue=6e-15, Organism=Caenorhabditis elegans, GI133931050, Length=255, Percent_Identity=30.1960784313725, Blast_Score=76, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6320148, Length=269, Percent_Identity=26.3940520446097, Blast_Score=73, Evalue=6e-14, Organism=Drosophila melanogaster, GI21355443, Length=257, Percent_Identity=25.2918287937743, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24644084, Length=257, Percent_Identity=25.2918287937743, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 32102; Mature: 31971
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQRIRKAVFPVAGLGTRFLPATKTVPKEMLPIIDKPLIQYAVDEAIQAGCDTLIFVTNR CCHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECH YKHSIADYFDKAYELEQKLERAGKLEQLELVRHALPDGVRAIFVTQAEALGLGHAVLCAK HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEHHHHHCCCHHHHHHH AVVGNEPFAVLLPDDLMWNRGDAALTQMANVAEASGGSVIAVEDVPHDKTASYGIVSTDA HHHCCCCEEEEECCHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCC FDGRKGRINAIVEKPKPEVAPSNLAVVGRYVLSPKIFDLLEATGAGAGGEIQLTDAIAEL CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCEEEEHHHHHHH LKEEQVDAFRFEGRRFDCGAHIGLIEATVHFALEHEKHGGPAKEILREALAQADVRG HHHHCCHHHHCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure SQRIRKAVFPVAGLGTRFLPATKTVPKEMLPIIDKPLIQYAVDEAIQAGCDTLIFVTNR CHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECH YKHSIADYFDKAYELEQKLERAGKLEQLELVRHALPDGVRAIFVTQAEALGLGHAVLCAK HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEHHHHHCCCHHHHHHH AVVGNEPFAVLLPDDLMWNRGDAALTQMANVAEASGGSVIAVEDVPHDKTASYGIVSTDA HHHCCCCEEEEECCHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCC FDGRKGRINAIVEKPKPEVAPSNLAVVGRYVLSPKIFDLLEATGAGAGGEIQLTDAIAEL CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCEEEEHHHHHHH LKEEQVDAFRFEGRRFDCGAHIGLIEATVHFALEHEKHGGPAKEILREALAQADVRG HHHHCCHHHHCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA