| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is yme
Identifier: 21242996
GI number: 21242996
Start: 2643559
End: 2645664
Strand: Reverse
Name: yme
Synonym: XAC2261
Alternate gene names: NA
Gene position: 2645664-2643559 (Counterclockwise)
Preceding gene: 21242997
Following gene: 21242987
Centisome position: 51.12
GC content: 58.64
Gene sequence:
>2106_bases ATGAAATGCTATGTCCGATATATCGGCGTGATAGACCAGGAAAATGAGACGCACAGTGTGAAATTCAAGCAAGGCTTGAA TATCATTACCGGTAAATCTTCAAAGGGCAAAAGTGCCATTCTCGACATCTTCGATTACTGCATGGGCAGTTCTGAAGATA CAATTCCGCAAGGCATCATCACCCAGCGGGCGAAGATATTCTTTACCGTATGGCGCTTTTCCGGGATGGCTGTGGTCGCA GGCCGAAGAGCATGCAACGCCAACCAATGTTTCCTGCGAGAAGTCAGTGGCGAGCAGGCCAAGCATGTGCTGGCCTACGT CAAGGACGTGGACAACTTCTTCATCGCGCAATACCAGCTTAGCCGGATCGAATTCTCCAAGAGCCTGGGGCGCTACTTCG GCGTCACCATGGACGACATCGACACCGACCCGCTGCAGAAGCAGCTCATGCGTCAGAAAAGCCCGACGCGCTCCATCCGC AGTTTTGCCTCGTTCATGCTCCAGCATCAAAACCTGGTGGCCAACCGGCATGCGATCTTTTACCGCTTCGACGAAAAGCG AAAGCGCGAACAGGCTATTGATCACTTCAAGATCTTCATGGGGATCGTGGGCGAGGACTATTTCGACCTGGCCAAGGAAC TCGCCGAAGCAGAAACCGAGCTCAAACGTGCGCTGGCCGTCATCCCTAAGCAGGAGCAGATCAAATCGGCCGGCATCGGA GAGATGGCGGGCTACCTGCGGGAGTTCCATGCCCTGGCGGGAACGCCGCTGACAGAGTTGAGCGCCGAAGAAATCTGGAT GCGGCCGGCGCAGGCCCTCGAACGCTTGACCGGCATCGCCGTCACGGTCGATGGGCAGTCCGATACCTTCGACGCGATCC GCAAGGAATTGCGCACACGCAAGGCCGAGATCATGGCCGAGATCCAGAAGGCCCTGAACACGCGCTACCTGCTTGACGTC TCGACACAGCAAGTCGAGGGATTCGCCGGAGCCATGACGGATCTGCCCATCCCGAAGGCGACCCATCTGGACCATGCCGT GTGCCCGGTCTGTGCGTCACCCTCGGAAGCCGCCGAAGATGAGGCCAACAGACTCTCGGCGGCCATCCACTGGCTCAACG GTGAGCTGAAGGTCTCGGCCTATGCCCGCGAGGGCTTTGGCCAGGAGCGTCGGGACATTGACGAGCAACTCAAGAAGGCG CGCCAGGCCTTGCGGCAGGTCGAAAGCACACTGCGTCCACTGGACCAGGAAGCCGACCGCCTGCAGCGCTCGAAGTCTGT CGATGCGGCAGCGCAGAAAGCCAAGATCAAGCTAGAACTTGCCATTGAGCGCCGCATCGATAGTCCGCCCACGGAAACTA CGGAGTTGGTGAAGTTGCTCCATGACCGGGTGGCGGACCTGAAATCGAAGAAGGCTTTGCTCGATGTCGCGCCCCGGCTG CTGGCCTTGCAACGCGACATCAACCGGAGCCTGGAGATCATCGGCACACATTTCGACTTCGAGGACTCCTATAAGAATGG ATCCCTGAAGTTCGACATCGATTCCTTCGACCTATGGCATGAGACACCGGGGGTAAACGGTGCGCCGGAGAAGAAAGTCT TCCTGCGGTCGATGGGCAGTGGAGCGAACTGGCTGTATTCGCACCTGACGCTGTTCTTGTCGCTGCACTACCAGTTTGCG GCCTACGCTGACTGCAAGCTGCCGCCCGTGCTGTTTCTCGACCAACCGACGCAGGTCTACTTCCCCTCCGCCGATTACGG CAAGGAATTCAATGCAGCCCAATTGCGCGCGAACCAGGACGACACATCCGCCAGCGTGCCCGGCAGCCCGCAGTCCGAAG AGACTGCGGACGAGCCCGCGACACGCGCCGCGAACTCGCCTTTGGACACGCACACACGCATCTCGACGGCCGATGACGAC TTGAATACCGTCGCCAAGATGTTCACCGTTCTGGCCAAGTTCTGTGATGACACGGCACAGGAGGTCGGCAACAAGCCGCA AATCATCGTCTGCGACCATGCCGACAGACTGGAACTCGGCGAGGGCTACAACTTCGAGGACTTTGTCGCCGACCGCTGGC GCGACCGTGGCTTCATCGCGACGTAA
Upstream 100 bases:
>100_bases ATGCAGCCCCCAAGATGCTGCGTTGTGCGCGTCAACTCGCCATGGTATTCAGAAATGAAAGTGTCGTGACCATTTATAGA ATGCTGGGATTGAAGTCGCT
Downstream 100 bases:
>100_bases CCGTGCAGCAGGCCCAGGCCTACATCGGCCCGCCCGCAAAGCCTGGTTGGACCCGGCGGGCTTTGTCCTGGTGGCTACTG GGTCAGTTCCAGATGGAAAT
Product: plasmid-related protein
Products: NA
Alternate protein names: ATPase; Yme-Like Protein
Number of amino acids: Translated: 701; Mature: 701
Protein sequence:
>701_residues MKCYVRYIGVIDQENETHSVKFKQGLNIITGKSSKGKSAILDIFDYCMGSSEDTIPQGIITQRAKIFFTVWRFSGMAVVA GRRACNANQCFLREVSGEQAKHVLAYVKDVDNFFIAQYQLSRIEFSKSLGRYFGVTMDDIDTDPLQKQLMRQKSPTRSIR SFASFMLQHQNLVANRHAIFYRFDEKRKREQAIDHFKIFMGIVGEDYFDLAKELAEAETELKRALAVIPKQEQIKSAGIG EMAGYLREFHALAGTPLTELSAEEIWMRPAQALERLTGIAVTVDGQSDTFDAIRKELRTRKAEIMAEIQKALNTRYLLDV STQQVEGFAGAMTDLPIPKATHLDHAVCPVCASPSEAAEDEANRLSAAIHWLNGELKVSAYAREGFGQERRDIDEQLKKA RQALRQVESTLRPLDQEADRLQRSKSVDAAAQKAKIKLELAIERRIDSPPTETTELVKLLHDRVADLKSKKALLDVAPRL LALQRDINRSLEIIGTHFDFEDSYKNGSLKFDIDSFDLWHETPGVNGAPEKKVFLRSMGSGANWLYSHLTLFLSLHYQFA AYADCKLPPVLFLDQPTQVYFPSADYGKEFNAAQLRANQDDTSASVPGSPQSEETADEPATRAANSPLDTHTRISTADDD LNTVAKMFTVLAKFCDDTAQEVGNKPQIIVCDHADRLELGEGYNFEDFVADRWRDRGFIAT
Sequences:
>Translated_701_residues MKCYVRYIGVIDQENETHSVKFKQGLNIITGKSSKGKSAILDIFDYCMGSSEDTIPQGIITQRAKIFFTVWRFSGMAVVA GRRACNANQCFLREVSGEQAKHVLAYVKDVDNFFIAQYQLSRIEFSKSLGRYFGVTMDDIDTDPLQKQLMRQKSPTRSIR SFASFMLQHQNLVANRHAIFYRFDEKRKREQAIDHFKIFMGIVGEDYFDLAKELAEAETELKRALAVIPKQEQIKSAGIG EMAGYLREFHALAGTPLTELSAEEIWMRPAQALERLTGIAVTVDGQSDTFDAIRKELRTRKAEIMAEIQKALNTRYLLDV STQQVEGFAGAMTDLPIPKATHLDHAVCPVCASPSEAAEDEANRLSAAIHWLNGELKVSAYAREGFGQERRDIDEQLKKA RQALRQVESTLRPLDQEADRLQRSKSVDAAAQKAKIKLELAIERRIDSPPTETTELVKLLHDRVADLKSKKALLDVAPRL LALQRDINRSLEIIGTHFDFEDSYKNGSLKFDIDSFDLWHETPGVNGAPEKKVFLRSMGSGANWLYSHLTLFLSLHYQFA AYADCKLPPVLFLDQPTQVYFPSADYGKEFNAAQLRANQDDTSASVPGSPQSEETADEPATRAANSPLDTHTRISTADDD LNTVAKMFTVLAKFCDDTAQEVGNKPQIIVCDHADRLELGEGYNFEDFVADRWRDRGFIAT >Mature_701_residues MKCYVRYIGVIDQENETHSVKFKQGLNIITGKSSKGKSAILDIFDYCMGSSEDTIPQGIITQRAKIFFTVWRFSGMAVVA GRRACNANQCFLREVSGEQAKHVLAYVKDVDNFFIAQYQLSRIEFSKSLGRYFGVTMDDIDTDPLQKQLMRQKSPTRSIR SFASFMLQHQNLVANRHAIFYRFDEKRKREQAIDHFKIFMGIVGEDYFDLAKELAEAETELKRALAVIPKQEQIKSAGIG EMAGYLREFHALAGTPLTELSAEEIWMRPAQALERLTGIAVTVDGQSDTFDAIRKELRTRKAEIMAEIQKALNTRYLLDV STQQVEGFAGAMTDLPIPKATHLDHAVCPVCASPSEAAEDEANRLSAAIHWLNGELKVSAYAREGFGQERRDIDEQLKKA RQALRQVESTLRPLDQEADRLQRSKSVDAAAQKAKIKLELAIERRIDSPPTETTELVKLLHDRVADLKSKKALLDVAPRL LALQRDINRSLEIIGTHFDFEDSYKNGSLKFDIDSFDLWHETPGVNGAPEKKVFLRSMGSGANWLYSHLTLFLSLHYQFA AYADCKLPPVLFLDQPTQVYFPSADYGKEFNAAQLRANQDDTSASVPGSPQSEETADEPATRAANSPLDTHTRISTADDD LNTVAKMFTVLAKFCDDTAQEVGNKPQIIVCDHADRLELGEGYNFEDFVADRWRDRGFIAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78867; Mature: 78867
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCYVRYIGVIDQENETHSVKFKQGLNIITGKSSKGKSAILDIFDYCMGSSEDTIPQGII CEEEEEEEEEECCCCCCCCEEHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHH TQRAKIFFTVWRFSGMAVVAGRRACNANQCFLREVSGEQAKHVLAYVKDVDNFFIAQYQL HHHHHHEEEEHHHCCEEEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH SRIEFSKSLGRYFGVTMDDIDTDPLQKQLMRQKSPTRSIRSFASFMLQHQNLVANRHAIF HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEE YRFDEKRKREQAIDHFKIFMGIVGEDYFDLAKELAEAETELKRALAVIPKQEQIKSAGIG EEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHH EMAGYLREFHALAGTPLTELSAEEIWMRPAQALERLTGIAVTVDGQSDTFDAIRKELRTR HHHHHHHHHHHHCCCCHHHCCHHHHHHCHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHH KAEIMAEIQKALNTRYLLDVSTQQVEGFAGAMTDLPIPKATHLDHAVCPVCASPSEAAED HHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH EANRLSAAIHWLNGELKVSAYAREGFGQERRDIDEQLKKARQALRQVESTLRPLDQEADR HHHHHHHHHHEECCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LQRSKSVDAAAQKAKIKLELAIERRIDSPPTETTELVKLLHDRVADLKSKKALLDVAPRL HHHHHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALQRDINRSLEIIGTHFDFEDSYKNGSLKFDIDSFDLWHETPGVNGAPEKKVFLRSMGS HHHHHHHCCCEEEEEEECCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCHHHHHHHCCC GANWLYSHLTLFLSLHYQFAAYADCKLPPVLFLDQPTQVYFPSADYGKEFNAAQLRANQD CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCCCCCCCHHHHCCCCC DTSASVPGSPQSEETADEPATRAANSPLDTHTRISTADDDLNTVAKMFTVLAKFCDDTAQ CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH EVGNKPQIIVCDHADRLELGEGYNFEDFVADRWRDRGFIAT HCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKCYVRYIGVIDQENETHSVKFKQGLNIITGKSSKGKSAILDIFDYCMGSSEDTIPQGII CEEEEEEEEEECCCCCCCCEEHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHH TQRAKIFFTVWRFSGMAVVAGRRACNANQCFLREVSGEQAKHVLAYVKDVDNFFIAQYQL HHHHHHEEEEHHHCCEEEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH SRIEFSKSLGRYFGVTMDDIDTDPLQKQLMRQKSPTRSIRSFASFMLQHQNLVANRHAIF HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEE YRFDEKRKREQAIDHFKIFMGIVGEDYFDLAKELAEAETELKRALAVIPKQEQIKSAGIG EEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHH EMAGYLREFHALAGTPLTELSAEEIWMRPAQALERLTGIAVTVDGQSDTFDAIRKELRTR HHHHHHHHHHHHCCCCHHHCCHHHHHHCHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHH KAEIMAEIQKALNTRYLLDVSTQQVEGFAGAMTDLPIPKATHLDHAVCPVCASPSEAAED HHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH EANRLSAAIHWLNGELKVSAYAREGFGQERRDIDEQLKKARQALRQVESTLRPLDQEADR HHHHHHHHHHEECCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LQRSKSVDAAAQKAKIKLELAIERRIDSPPTETTELVKLLHDRVADLKSKKALLDVAPRL HHHHHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALQRDINRSLEIIGTHFDFEDSYKNGSLKFDIDSFDLWHETPGVNGAPEKKVFLRSMGS HHHHHHHCCCEEEEEEECCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCHHHHHHHCCC GANWLYSHLTLFLSLHYQFAAYADCKLPPVLFLDQPTQVYFPSADYGKEFNAAQLRANQD CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCCCCCCCHHHHCCCCC DTSASVPGSPQSEETADEPATRAANSPLDTHTRISTADDDLNTVAKMFTVLAKFCDDTAQ CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH EVGNKPQIIVCDHADRLELGEGYNFEDFVADRWRDRGFIAT HCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA