| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242985
Identifier: 21242985
GI number: 21242985
Start: 2634223
End: 2634843
Strand: Direct
Name: 21242985
Synonym: XAC2250
Alternate gene names: NA
Gene position: 2634223-2634843 (Clockwise)
Preceding gene: 77748641
Following gene: 21242986
Centisome position: 50.9
GC content: 60.87
Gene sequence:
>621_bases ATGAGATTGTTCAGCGCGGCCGTCATCGCCATGTCGGCCTTGTGTGTCCCTCCGGCCCACGCACAGCAGCAGCCCGTGAA CACGGGACTTGGCGAGTGCGTGGATTTCGTGATTTTTGCCTCCAGCACGCTCACGGGCCAGGTCAACGGCACCACGTTCC CCTTCGTGTACGGTCCAGCCACCTATCTGGACAAGCCCGGAAGCACCGTCTACATCCAGAACTATTCGTGTGCCTCCAAC GACATCCCGGGGCTGTACTCCAGGGTATCCATAGTCAGCCACGAGATGGGCCATCTGTACCTGGACCAGGGTTGGGTGCT CGGCACGCGGGAAGACTACATTGCCAAGGCCTGCACCAATGAAGGACGGGCCGTGCTCAACAACTCCACTGCGCGCAGCG AGATACTGGACACCTCCCAGGGAAGCGCCGACATCAGCCTGATCGCGGCGAATGCCTCGGCGCTGCTGTCCACGATCGCG GCCGGAGGCAACGATCTGGCCGAGCGTGTGGGGGATGCGTTCTGCGAGGCCAATGTCACGTCCACCACCGGTGAGAACTA CAAGGTGTACTACGGCAACGAATACGACAAACTCAATCCCCCGTCGCAAGAGGAGCAGTAA
Upstream 100 bases:
>100_bases CTGGGCAACCGCGATCCGCGTCAAATTCGCAGCGCACGGTGCTTGCATTCAAGCCTTTGCCTGTTCTAGAAAACCCTCAC ACCCCACGGAAGGAGGAAGC
Downstream 100 bases:
>100_bases GCCATGAAGACTCTCGTCGCCGCTCTGGGCGCGGTCGTCCTCGCGACGGCTCCGCTGGCACCTGCCGCAGCCGCACCGCG CGCTCCCGCCGCTGCCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MRLFSAAVIAMSALCVPPAHAQQQPVNTGLGECVDFVIFASSTLTGQVNGTTFPFVYGPATYLDKPGSTVYIQNYSCASN DIPGLYSRVSIVSHEMGHLYLDQGWVLGTREDYIAKACTNEGRAVLNNSTARSEILDTSQGSADISLIAANASALLSTIA AGGNDLAERVGDAFCEANVTSTTGENYKVYYGNEYDKLNPPSQEEQ
Sequences:
>Translated_206_residues MRLFSAAVIAMSALCVPPAHAQQQPVNTGLGECVDFVIFASSTLTGQVNGTTFPFVYGPATYLDKPGSTVYIQNYSCASN DIPGLYSRVSIVSHEMGHLYLDQGWVLGTREDYIAKACTNEGRAVLNNSTARSEILDTSQGSADISLIAANASALLSTIA AGGNDLAERVGDAFCEANVTSTTGENYKVYYGNEYDKLNPPSQEEQ >Mature_206_residues MRLFSAAVIAMSALCVPPAHAQQQPVNTGLGECVDFVIFASSTLTGQVNGTTFPFVYGPATYLDKPGSTVYIQNYSCASN DIPGLYSRVSIVSHEMGHLYLDQGWVLGTREDYIAKACTNEGRAVLNNSTARSEILDTSQGSADISLIAANASALLSTIA AGGNDLAERVGDAFCEANVTSTTGENYKVYYGNEYDKLNPPSQEEQ
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21939; Mature: 21939
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLFSAAVIAMSALCVPPAHAQQQPVNTGLGECVDFVIFASSTLTGQVNGTTFPFVYGPA CCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCEECCEEECCH TYLDKPGSTVYIQNYSCASNDIPGLYSRVSIVSHEMGHLYLDQGWVLGTREDYIAKACTN HHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCCEEEECHHHHHHHHHCC EGRAVLNNSTARSEILDTSQGSADISLIAANASALLSTIAAGGNDLAERVGDAFCEANVT CCCEEECCCCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHCCCCC STTGENYKVYYGNEYDKLNPPSQEEQ CCCCCCEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MRLFSAAVIAMSALCVPPAHAQQQPVNTGLGECVDFVIFASSTLTGQVNGTTFPFVYGPA CCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCEECCEEECCH TYLDKPGSTVYIQNYSCASNDIPGLYSRVSIVSHEMGHLYLDQGWVLGTREDYIAKACTN HHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCCEEEECHHHHHHHHHCC EGRAVLNNSTARSEILDTSQGSADISLIAANASALLSTIAAGGNDLAERVGDAFCEANVT CCCEEECCCCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHCCCCC STTGENYKVYYGNEYDKLNPPSQEEQ CCCCCCEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA