| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242982
Identifier: 21242982
GI number: 21242982
Start: 2629394
End: 2631958
Strand: Direct
Name: 21242982
Synonym: XAC2247
Alternate gene names: NA
Gene position: 2629394-2631958 (Clockwise)
Preceding gene: 21242981
Following gene: 21242983
Centisome position: 50.8
GC content: 66.35
Gene sequence:
>2565_bases ATGCCGGCCAACGATGCCATCCTGCAAAGTCATCATGTCATTGAGCAAAGTGTTTTTCGTGACCATGATTTGCTCAAAAA ATTGGTGGAACATGGGCTGATCGATGAACACACATCAGCGAATCGTTTATATCTTCCAGTAGACGGTGGACTGGCGGACG CGCTTGAAACCTCACCGCACAGAGGTCGGACTCGCAGTTCTTACACCAAAGGAATTCGGCAAGAGCTCGATAGCATCGCC GATACCGGCGATGGTGTTGCCGCGCTAGCTGACGACCCTGCCGCGCTGCGAAGGGTCAACGCCAGAGTCGCCGAACTCCA AGACACCCTCAAGGTTGCGCTGGTCAACGGCGATGCTCTAGCAACGACGCCGGACAGCCTGACTAAGGACCAGGCGAATG CGCGGAACAACAGAACCTTTTCCGACCTCGACCACTACCGGGCAACGCATGCCGATCAACTGAAAGCCCTTCGTTCCATG GGCTCCGTGGAGTCCGAATGGGCGGCCGTCACCCACTCGGAGCATCGCATTGTGCGGGTGATCGATGCTGCGCGCGCCAC CGGCAGCAATCTGGTGGCGGCCCCCTACGAGCCTGCGGTCCGGGAAATCGTCGGACGGGAGGAGTTCCGCCTTGCGATCG CCCACGCGCAGGACGCCGGACGTGTGACGTTATCCGAATCCAATGCGGCCTTGATCCAGCAGGTACTGGATGACACGCCG ACGGCCATCGGAGGTGCCGCACGCGGGATTCGCCAGGTAGCTGGCGCATCACCGCCCCCCTACACCCCTCTCTCGCAACG CGGCTTCGCCACCGCCGAGTTGCTGGCAGGCGACCTGTCGGCGGGCCAGGCGCTGCGCAGTGCCGGGCTGCTCGTCACCG CCGCCGACGCGGTGACCTCCGGTCAACGCTCCGTACGCTTTCTCGGCCAGGACAACCCGCTGGCTGCGCAATCGGAGCTG GCGCACTTTGCCGGCCGCAATGCGGGTGGCTGGGCCGGCGGCACCGCTGCCGCCTACGCGTTGGGCAGCTCCGGCGCCGG ACCGATGGTGCTGATCGCGGCCGACGCGTACTTCATGAGTGTCGCCGGCGAGAAAGCCGCCGCCCTGCTCGACAACCGCG CCATCTACCACCAGACCGATCGCGACGGAACTGCATGGTCGTTCGATGGCCGTGCCTGGTCGCGGGGCGGCATGGCCGAC ACGACCGGCGACGGGATCGACAACCCCGCCGCCATGCCGATCGTCGCCAGCTACGCGAAGTCCCGTGAACTCAACTACCA CGCCACCAATGCCGCCGCCGCGCTGGCACTCAAAGACGCACCCGCGCCCACAGATCCCTATCGGCAACCGGCCAATGCCG GCGACCGACCGAGCCTAAACGCTGCCGACTGGAGGCGCGATACGGCGGACGGGCAATGGCACCGCCTGGTCAAGACCGAG ATCTCCGGTGCCAACGATCGGGGCGGCTATGAGCAGGAGACCGCCTCGCCGCCACGCGCGGCGGAACTGGATGCGCAGGC GCAGGCAGTCATCGCCCACAACATCGCCAACAGCCCCGGCGCGATCGCCGCGCGTTATGAACTGACCTACCACCGAAGCG GCTGGGCCGCCGAAGGTTTGCCGATGTCGCCCGCGGTCCAGCAGGCGCTGCCAGACCCGGATGCCCTGATCGCCTCGAAC GGCCAGCGGTACTACCGCAACATGGAGGGCCAGTGGACCGGCCAAGGCGCTCCGCCCGATGCCAATCGCGTGCTGGAACT GGAGACCACGCGCGCGATGCTGCAGCCAGCACTCGCCGAGCAGGCACAGGCGATCGCCACCATCCAGCAATCGCCGCCGT CGCCGCAGGACGTGCAGCGCGAGCAGACGCTGTACCAGTACCGCATCGTGGGCACGGAACTGCAGCCCCAATGGCAAGAG GCCATCGAGCTGGCGACGCAGCGCACCCGCGAAGCGGAAGGACTCGCGGGCGATGGCGCCATGCAGCTGCAACGCGGGCC GGGCGGTCAGTACGGCGCCGACAGTCCGATCACCCATCTCCAACGCGGCCCCGATGGCGTGGAGCGCATCGCAGCGGTCA CCAGCACCGAGGACATTCGCCAGGCGCTGCGGGAGGTGCAGGCACGACAGCATTCGGCCGTGCCCATGCAGCAGGTGGCC TCCGCGCAGCGTCCCTCCGAAGGCTCCGCGGATACGGACACCTCGGACGCTTCTCCCTCCAACCAGCACGCGCTCGATGT GCAGGCCCGCGGCCAGGCGGCCAATGCCGCGCAGGAACGCCAGGAGCGGCAGCAGGAGGACCGACAGGCGCAGGAACAAC ATTTGGCGCAGGTACGCGCGCACGCGCTGCAGGAGCAGGCATCCCATGACGATCGGGCACAGGCCGCTGCGGCGCTGCAG GCGCATGCGGTTTCGGAACTCCGCCAGCAAGAGTCGCAGCAGTTGCAGCAGTTGCAGCAGCAAGAGCAACACCAACAACG GCAGGCCCTCGACGCGCAGCAGGGCGAACAACGTGAGCAGCAGGCAGCGCACGACGCCCGGCAGCAAGAAACCTTGGATC GATAA
Upstream 100 bases:
>100_bases AGGCGGCTTTGGAAAAGCCCCTCGTTCGCGCGGCGTCTGGCTTGAAGACGCCGCGAAATACTGATCCGTCTGCTATCGCC CCCCTTCGGAGCCGAGGCGC
Downstream 100 bases:
>100_bases GCCCAGCAGACTGAGCTACGAGAGGAGGAAGCACGCCGCACCCAGGACGCCGACCAGCGCACGCAAGAACGCCGGCAGGC GCAAGACGCCCAGCATCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 854; Mature: 853
Protein sequence:
>854_residues MPANDAILQSHHVIEQSVFRDHDLLKKLVEHGLIDEHTSANRLYLPVDGGLADALETSPHRGRTRSSYTKGIRQELDSIA DTGDGVAALADDPAALRRVNARVAELQDTLKVALVNGDALATTPDSLTKDQANARNNRTFSDLDHYRATHADQLKALRSM GSVESEWAAVTHSEHRIVRVIDAARATGSNLVAAPYEPAVREIVGREEFRLAIAHAQDAGRVTLSESNAALIQQVLDDTP TAIGGAARGIRQVAGASPPPYTPLSQRGFATAELLAGDLSAGQALRSAGLLVTAADAVTSGQRSVRFLGQDNPLAAQSEL AHFAGRNAGGWAGGTAAAYALGSSGAGPMVLIAADAYFMSVAGEKAAALLDNRAIYHQTDRDGTAWSFDGRAWSRGGMAD TTGDGIDNPAAMPIVASYAKSRELNYHATNAAAALALKDAPAPTDPYRQPANAGDRPSLNAADWRRDTADGQWHRLVKTE ISGANDRGGYEQETASPPRAAELDAQAQAVIAHNIANSPGAIAARYELTYHRSGWAAEGLPMSPAVQQALPDPDALIASN GQRYYRNMEGQWTGQGAPPDANRVLELETTRAMLQPALAEQAQAIATIQQSPPSPQDVQREQTLYQYRIVGTELQPQWQE AIELATQRTREAEGLAGDGAMQLQRGPGGQYGADSPITHLQRGPDGVERIAAVTSTEDIRQALREVQARQHSAVPMQQVA SAQRPSEGSADTDTSDASPSNQHALDVQARGQAANAAQERQERQQEDRQAQEQHLAQVRAHALQEQASHDDRAQAAAALQ AHAVSELRQQESQQLQQLQQQEQHQQRQALDAQQGEQREQQAAHDARQQETLDR
Sequences:
>Translated_854_residues MPANDAILQSHHVIEQSVFRDHDLLKKLVEHGLIDEHTSANRLYLPVDGGLADALETSPHRGRTRSSYTKGIRQELDSIA DTGDGVAALADDPAALRRVNARVAELQDTLKVALVNGDALATTPDSLTKDQANARNNRTFSDLDHYRATHADQLKALRSM GSVESEWAAVTHSEHRIVRVIDAARATGSNLVAAPYEPAVREIVGREEFRLAIAHAQDAGRVTLSESNAALIQQVLDDTP TAIGGAARGIRQVAGASPPPYTPLSQRGFATAELLAGDLSAGQALRSAGLLVTAADAVTSGQRSVRFLGQDNPLAAQSEL AHFAGRNAGGWAGGTAAAYALGSSGAGPMVLIAADAYFMSVAGEKAAALLDNRAIYHQTDRDGTAWSFDGRAWSRGGMAD TTGDGIDNPAAMPIVASYAKSRELNYHATNAAAALALKDAPAPTDPYRQPANAGDRPSLNAADWRRDTADGQWHRLVKTE ISGANDRGGYEQETASPPRAAELDAQAQAVIAHNIANSPGAIAARYELTYHRSGWAAEGLPMSPAVQQALPDPDALIASN GQRYYRNMEGQWTGQGAPPDANRVLELETTRAMLQPALAEQAQAIATIQQSPPSPQDVQREQTLYQYRIVGTELQPQWQE AIELATQRTREAEGLAGDGAMQLQRGPGGQYGADSPITHLQRGPDGVERIAAVTSTEDIRQALREVQARQHSAVPMQQVA SAQRPSEGSADTDTSDASPSNQHALDVQARGQAANAAQERQERQQEDRQAQEQHLAQVRAHALQEQASHDDRAQAAAALQ AHAVSELRQQESQQLQQLQQQEQHQQRQALDAQQGEQREQQAAHDARQQETLDR >Mature_853_residues PANDAILQSHHVIEQSVFRDHDLLKKLVEHGLIDEHTSANRLYLPVDGGLADALETSPHRGRTRSSYTKGIRQELDSIAD TGDGVAALADDPAALRRVNARVAELQDTLKVALVNGDALATTPDSLTKDQANARNNRTFSDLDHYRATHADQLKALRSMG SVESEWAAVTHSEHRIVRVIDAARATGSNLVAAPYEPAVREIVGREEFRLAIAHAQDAGRVTLSESNAALIQQVLDDTPT AIGGAARGIRQVAGASPPPYTPLSQRGFATAELLAGDLSAGQALRSAGLLVTAADAVTSGQRSVRFLGQDNPLAAQSELA HFAGRNAGGWAGGTAAAYALGSSGAGPMVLIAADAYFMSVAGEKAAALLDNRAIYHQTDRDGTAWSFDGRAWSRGGMADT TGDGIDNPAAMPIVASYAKSRELNYHATNAAAALALKDAPAPTDPYRQPANAGDRPSLNAADWRRDTADGQWHRLVKTEI SGANDRGGYEQETASPPRAAELDAQAQAVIAHNIANSPGAIAARYELTYHRSGWAAEGLPMSPAVQQALPDPDALIASNG QRYYRNMEGQWTGQGAPPDANRVLELETTRAMLQPALAEQAQAIATIQQSPPSPQDVQREQTLYQYRIVGTELQPQWQEA IELATQRTREAEGLAGDGAMQLQRGPGGQYGADSPITHLQRGPDGVERIAAVTSTEDIRQALREVQARQHSAVPMQQVAS AQRPSEGSADTDTSDASPSNQHALDVQARGQAANAAQERQERQQEDRQAQEQHLAQVRAHALQEQASHDDRAQAAAALQA HAVSELRQQESQQLQQLQQQEQHQQRQALDAQQGEQREQQAAHDARQQETLDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91616; Mature: 91485
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPANDAILQSHHVIEQSVFRDHDLLKKLVEHGLIDEHTSANRLYLPVDGGLADALETSPH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHCCCC RGRTRSSYTKGIRQELDSIADTGDGVAALADDPAALRRVNARVAELQDTLKVALVNGDAL CCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEEEEECCCEE ATTPDSLTKDQANARNNRTFSDLDHYRATHADQLKALRSMGSVESEWAAVTHSEHRIVRV ECCCCHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHH IDAARATGSNLVAAPYEPAVREIVGREEFRLAIAHAQDAGRVTLSESNAALIQQVLDDTP HHHHHCCCCCEEECCCCHHHHHHHCCHHHEEEEEECCCCCCEEECCCCHHHHHHHHHCCC TAIGGAARGIRQVAGASPPPYTPLSQRGFATAELLAGDLSAGQALRSAGLLVTAADAVTS CHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHC GQRSVRFLGQDNPLAAQSELAHFAGRNAGGWAGGTAAAYALGSSGAGPMVLIAADAYFMS CCHHEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEEEEEECHHHHH VAGEKAAALLDNRAIYHQTDRDGTAWSFDGRAWSRGGMADTTGDGIDNPAAMPIVASYAK HCCHHHHHHHHCCHHEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH SRELNYHATNAAAALALKDAPAPTDPYRQPANAGDRPSLNAADWRRDTADGQWHRLVKTE HCCCCEECCCHHHHEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHH ISGANDRGGYEQETASPPRAAELDAQAQAVIAHNIANSPGAIAARYELTYHRSGWAAEGL CCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCC PMSPAVQQALPDPDALIASNGQRYYRNMEGQWTGQGAPPDANRVLELETTRAMLQPALAE CCCHHHHHHCCCCCCEECCCCHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHH QAQAIATIQQSPPSPQDVQREQTLYQYRIVGTELQPQWQEAIELATQRTREAEGLAGDGA HHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCC MQLQRGPGGQYGADSPITHLQRGPDGVERIAAVTSTEDIRQALREVQARQHSAVPMQQVA CEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHH SAQRPSEGSADTDTSDASPSNQHALDVQARGQAANAAQERQERQQEDRQAQEQHLAQVRA HCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HALQEQASHDDRAQAAAALQAHAVSELRQQESQQLQQLQQQEQHQQRQALDAQQGEQREQ HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAAHDARQQETLDR HHHHHHHHHHHCCC >Mature Secondary Structure PANDAILQSHHVIEQSVFRDHDLLKKLVEHGLIDEHTSANRLYLPVDGGLADALETSPH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHCCCC RGRTRSSYTKGIRQELDSIADTGDGVAALADDPAALRRVNARVAELQDTLKVALVNGDAL CCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEEEEECCCEE ATTPDSLTKDQANARNNRTFSDLDHYRATHADQLKALRSMGSVESEWAAVTHSEHRIVRV ECCCCHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHH IDAARATGSNLVAAPYEPAVREIVGREEFRLAIAHAQDAGRVTLSESNAALIQQVLDDTP HHHHHCCCCCEEECCCCHHHHHHHCCHHHEEEEEECCCCCCEEECCCCHHHHHHHHHCCC TAIGGAARGIRQVAGASPPPYTPLSQRGFATAELLAGDLSAGQALRSAGLLVTAADAVTS CHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHC GQRSVRFLGQDNPLAAQSELAHFAGRNAGGWAGGTAAAYALGSSGAGPMVLIAADAYFMS CCHHEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEEEEEECHHHHH VAGEKAAALLDNRAIYHQTDRDGTAWSFDGRAWSRGGMADTTGDGIDNPAAMPIVASYAK HCCHHHHHHHHCCHHEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH SRELNYHATNAAAALALKDAPAPTDPYRQPANAGDRPSLNAADWRRDTADGQWHRLVKTE HCCCCEECCCHHHHEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHH ISGANDRGGYEQETASPPRAAELDAQAQAVIAHNIANSPGAIAARYELTYHRSGWAAEGL CCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCC PMSPAVQQALPDPDALIASNGQRYYRNMEGQWTGQGAPPDANRVLELETTRAMLQPALAE CCCHHHHHHCCCCCCEECCCCHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHH QAQAIATIQQSPPSPQDVQREQTLYQYRIVGTELQPQWQEAIELATQRTREAEGLAGDGA HHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCC MQLQRGPGGQYGADSPITHLQRGPDGVERIAAVTSTEDIRQALREVQARQHSAVPMQQVA CEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHH SAQRPSEGSADTDTSDASPSNQHALDVQARGQAANAAQERQERQQEDRQAQEQHLAQVRA HCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HALQEQASHDDRAQAAAALQAHAVSELRQQESQQLQQLQQQEQHQQRQALDAQQGEQREQ HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAAHDARQQETLDR HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA