| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242976
Identifier: 21242976
GI number: 21242976
Start: 2622876
End: 2623529
Strand: Direct
Name: 21242976
Synonym: XAC2241
Alternate gene names: NA
Gene position: 2622876-2623529 (Clockwise)
Preceding gene: 21242975
Following gene: 21242977
Centisome position: 50.68
GC content: 68.2
Gene sequence:
>654_bases ATGCCCGCAAACCCTTCTTCCACCCCGCGTCTGTACCCCATCGACGAATGCCCCGACCTGATGGCCGATGCCTGCGTCTG CGGCGCACAGGGCGAACTCGTCTTTCTGTCCGTCTGGGCACGCGATACCGCCATCCAGGAGTTCCTGGCGCGCCTGACAT TGCCAGGCGACGCCCAAGGCCTGGACCAGTTCCATCTGGTCACCGGCGACGGTGCATCGCTTCCCGTGTTCGTCGGCAAC GCCGAACAGTTGGAAAAGCGCACGACCCGCGCCTACCGCCGCACCCTGTTCGGCTCCATGGTCCACCTGTGGCTGTTCGA TCGCCGCTGCGTGCAGCCCGACAAGGCGAACGCCAGCGCGCTCGCACTGATCCCCAAGGCCGATGCCGCATCCACCGAAC GGTTGTGGACGCTGGTGCGGCAGACCTGCCCGCTGCCCCTGCTCGACCACTGGCGCGACACCGTGCTGGAGCTGCTGTCC GCCCACGCGATGCTGAGCCGTCTTCCACTGGCCCTCGGGCCGCTCGAAGGCCATCGGCTGGCCCTGGACGTGCCCGTGCT CACCCAAGCGCTTGGCGATTTGATCCGCCGCGGCGTTCTGCGCACCTGCGCGCAGGACGTCCTCCCGGCAGAGCCGCTTG GGCGACGCGCCTGA
Upstream 100 bases:
>100_bases CCCGGCGGTTCTTGCCGGGCTGAGCGGCTTTCTTCCATCCCCTGGGGCAGTGCTTGCCCCGGCGGGCGGTGCTGTTCCCG TTTCATCCTAGGACACAACC
Downstream 100 bases:
>100_bases CGCCTTCGATGGGCCTGCGATGCAGGCCCCCTTCCCTTTTTTCTCACCGCACCAGGAGCATTCCATGGCACTCATGTTTC CGCGCCTCGCGCGCAATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MPANPSSTPRLYPIDECPDLMADACVCGAQGELVFLSVWARDTAIQEFLARLTLPGDAQGLDQFHLVTGDGASLPVFVGN AEQLEKRTTRAYRRTLFGSMVHLWLFDRRCVQPDKANASALALIPKADAASTERLWTLVRQTCPLPLLDHWRDTVLELLS AHAMLSRLPLALGPLEGHRLALDVPVLTQALGDLIRRGVLRTCAQDVLPAEPLGRRA
Sequences:
>Translated_217_residues MPANPSSTPRLYPIDECPDLMADACVCGAQGELVFLSVWARDTAIQEFLARLTLPGDAQGLDQFHLVTGDGASLPVFVGN AEQLEKRTTRAYRRTLFGSMVHLWLFDRRCVQPDKANASALALIPKADAASTERLWTLVRQTCPLPLLDHWRDTVLELLS AHAMLSRLPLALGPLEGHRLALDVPVLTQALGDLIRRGVLRTCAQDVLPAEPLGRRA >Mature_216_residues PANPSSTPRLYPIDECPDLMADACVCGAQGELVFLSVWARDTAIQEFLARLTLPGDAQGLDQFHLVTGDGASLPVFVGNA EQLEKRTTRAYRRTLFGSMVHLWLFDRRCVQPDKANASALALIPKADAASTERLWTLVRQTCPLPLLDHWRDTVLELLSA HAMLSRLPLALGPLEGHRLALDVPVLTQALGDLIRRGVLRTCAQDVLPAEPLGRRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23807; Mature: 23676
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPANPSSTPRLYPIDECPDLMADACVCGAQGELVFLSVWARDTAIQEFLARLTLPGDAQG CCCCCCCCCCEEECHHCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCC LDQFHLVTGDGASLPVFVGNAEQLEKRTTRAYRRTLFGSMVHLWLFDRRCVQPDKANASA CCEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE LALIPKADAASTERLWTLVRQTCPLPLLDHWRDTVLELLSAHAMLSRLPLALGPLEGHRL EEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEE ALDVPVLTQALGDLIRRGVLRTCAQDVLPAEPLGRRA EEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PANPSSTPRLYPIDECPDLMADACVCGAQGELVFLSVWARDTAIQEFLARLTLPGDAQG CCCCCCCCCEEECHHCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCC LDQFHLVTGDGASLPVFVGNAEQLEKRTTRAYRRTLFGSMVHLWLFDRRCVQPDKANASA CCEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE LALIPKADAASTERLWTLVRQTCPLPLLDHWRDTVLELLSAHAMLSRLPLALGPLEGHRL EEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEE ALDVPVLTQALGDLIRRGVLRTCAQDVLPAEPLGRRA EEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA