| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is ssb
Identifier: 21242946
GI number: 21242946
Start: 2595501
End: 2595887
Strand: Direct
Name: ssb
Synonym: XAC2211
Alternate gene names: NA
Gene position: 2595501-2595887 (Clockwise)
Preceding gene: 21242945
Following gene: 21242947
Centisome position: 50.15
GC content: 66.67
Gene sequence:
>387_bases ATGAGCACCCACTTTCATGGCGAAGGCAACATCGGCTCGCCCCCGAAGTTCGACGAGTATCCCAATGGCAACGAAGAGCC GCGGCGGGTGCTGCGCCTCAACGTTTATTTCGATAATCCTGTGCAGAACAAGGACGGCGCCTACGACGACCGCGGCGGCT TCTGGGCGCCCGTGGACTGGTGGCACCGCGACGCGGAGCGTTGGGCCACGCTGTTCGCCAAGGGCATGCGCGTGGCGGTG CGCGGGCACCTGGAACGCGACGACTGGACCGACGGTGATGGCGAGCCGCACACGACCTACAAGGTGGACGCGCGCAGCGT GGGTATCCTCCCGTACCGCCTGGACGCGGTGCATCTGAGCCCCAAGCCGGGCACCACCGGCGAGTAG
Upstream 100 bases:
>100_bases GCGCATCGCATCCGCGCCGGCGATGCCAGGCAACCACCACGGCTGCAAGCGCTCGCCCGAAGCAGCCTTCCTCCCCCCGC AACGCAACAGGAGATTCCGC
Downstream 100 bases:
>100_bases GCCACCGCGGCAAACCGGAGCCTGCCGCATGCGCGTTGTTGGCGGCGCCTCCGAGGCATCCCCGCGATGCTGACGGCCAT CTGATAACCGTCATGCATTT
Product: single-stranded DNA-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MSTHFHGEGNIGSPPKFDEYPNGNEEPRRVLRLNVYFDNPVQNKDGAYDDRGGFWAPVDWWHRDAERWATLFAKGMRVAV RGHLERDDWTDGDGEPHTTYKVDARSVGILPYRLDAVHLSPKPGTTGE
Sequences:
>Translated_128_residues MSTHFHGEGNIGSPPKFDEYPNGNEEPRRVLRLNVYFDNPVQNKDGAYDDRGGFWAPVDWWHRDAERWATLFAKGMRVAV RGHLERDDWTDGDGEPHTTYKVDARSVGILPYRLDAVHLSPKPGTTGE >Mature_127_residues STHFHGEGNIGSPPKFDEYPNGNEEPRRVLRLNVYFDNPVQNKDGAYDDRGGFWAPVDWWHRDAERWATLFAKGMRVAVR GHLERDDWTDGDGEPHTTYKVDARSVGILPYRLDAVHLSPKPGTTGE
Specific function: Unknown
COG id: COG0629
COG function: function code L; Single-stranded DNA-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14592; Mature: 14461
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS50935 SSB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTHFHGEGNIGSPPKFDEYPNGNEEPRRVLRLNVYFDNPVQNKDGAYDDRGGFWAPVDW CCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEECCHHH WHRDAERWATLFAKGMRVAVRGHLERDDWTDGDGEPHTTYKVDARSVGILPYRLDAVHLS HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEECCCEECCCEEEEEEEEEC PKPGTTGE CCCCCCCC >Mature Secondary Structure STHFHGEGNIGSPPKFDEYPNGNEEPRRVLRLNVYFDNPVQNKDGAYDDRGGFWAPVDW CCEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEECCHHH WHRDAERWATLFAKGMRVAVRGHLERDDWTDGDGEPHTTYKVDARSVGILPYRLDAVHLS HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEECCCEECCCEEEEEEEEEC PKPGTTGE CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA