| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242943
Identifier: 21242943
GI number: 21242943
Start: 2592457
End: 2593680
Strand: Direct
Name: 21242943
Synonym: XAC2208
Alternate gene names: NA
Gene position: 2592457-2593680 (Clockwise)
Preceding gene: 21242942
Following gene: 21242944
Centisome position: 50.09
GC content: 69.2
Gene sequence:
>1224_bases ATGGCAACCTCCGGGGCGCAGCGGCCGCACGGTCCACGGTCGCTGGCGGAGGTGCTCGATGCCGCGTGGGAACAGGCACC GCCCCCCGCGCAGTCCGCGCCGCGGCCCACGGCTCCCGCGCCCGGCAAACCCGCGTCCCACGACGGCTTCCTCTACAGCG GCAATCGGCACGAGAGCGTTCCGCGGGCGCTGTTCCTGGACCGCCGGCTGACCCCTCTGGAGCGCAACGCCTGGCAGGTC ATCCGGATGCAGCTGCATGCCGACGGTCTCACCTCGCTGCCGACCTACGAGCAACTGCGCCCCTTGTTGGCGGGCATGCC CTGCGGCCCCGTGGCTTCCACCGAGACGATCGCGCGCGCCCTGACGCTGCTGCGGCTCACGCGCTGGCTGAGCCTCGTGC GCAGGCGCCGCGATCCGCGAAGCGGCCGCATCCTCGGCAATCTCTACGTCCTGCACGACGCGCCGCTCACCCCGTTCGAG GCGATGCAACTCGACCCCGACTATCTGGGATTGGTCAGCCAGGCGCTGACGCATGCGAGCAAGGCCGTGCAACACGTCGG CCAGCACACCTTGCGGGAGATTGCCGAAGATCCCTTGCTGCGCGGCGGGGTGTTGCCCACGCGGCTGCAGGTGCTCTCGG AGCAACTGGCCCGCGGAGTGCCGCAGCCTTCGCAGGAGGAAGAAAGTTATGCACAGGATGCGCACATCGGCGATTCCGAA GGCGGCCCCGACGACCGGCTTCGGATTCCTTCGCCGCTGTCTTCGGATTCCGAATCGGGCCGGAAACCCGCGCCAAACCA CAGTCTTCGGAATCCGATGCAGGGCCGTACCGTACGTAGTTCCGTAGTAGAAGAACGTACGGTACCGCGCGCGAGCGCGC ACGGCGGCTTGCGCCTGCCGGCACAGTTCATCGGCTTGAAGGATGAGCAGCAGGCAGGGGCCTTGGTCGCTCTGCAGCAG GTCGCTCAGGAACAGCGGCAAGCCGTGCTGGACGAGTGGGCCGCGCGGTGTCGCGACCGAGGCGTGCGCAATCCAGCGGG CTACCTTTTCGGGATCATCCAGAAGGCCATCCGCGGCGAATTCAAGGCCACGGCAGGCCAGGCGCCGGCGCCGCCACCCC ATCCACCGCCATCCCCTGCACCGGCACCGCCGCCCAAGCCCGCGAGCAAGGAAGTGGCGCGAGCGCATCTGGAGCGGCTG CGCGCCATCTTGCGAGGTGCCTGA
Upstream 100 bases:
>100_bases CTGGATCTGGCGATGGACTTGTCCGAGGAGATGTCCCTCCCCCTGTCGGTCGTCTGGGCCGCTATTCAAGGCTGGATCGC GCAGGGACTGGTGTAGTCCC
Downstream 100 bases:
>100_bases GCACTGGGTGTTCGTCGGGTGCTCCAGGGGCGCCAGCGCCAGTCGACCACAGCGCTGCGCGGATCTTTATACCCAGGGTA TAGCTGGCCGGTCGCTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MATSGAQRPHGPRSLAEVLDAAWEQAPPPAQSAPRPTAPAPGKPASHDGFLYSGNRHESVPRALFLDRRLTPLERNAWQV IRMQLHADGLTSLPTYEQLRPLLAGMPCGPVASTETIARALTLLRLTRWLSLVRRRRDPRSGRILGNLYVLHDAPLTPFE AMQLDPDYLGLVSQALTHASKAVQHVGQHTLREIAEDPLLRGGVLPTRLQVLSEQLARGVPQPSQEEESYAQDAHIGDSE GGPDDRLRIPSPLSSDSESGRKPAPNHSLRNPMQGRTVRSSVVEERTVPRASAHGGLRLPAQFIGLKDEQQAGALVALQQ VAQEQRQAVLDEWAARCRDRGVRNPAGYLFGIIQKAIRGEFKATAGQAPAPPPHPPPSPAPAPPPKPASKEVARAHLERL RAILRGA
Sequences:
>Translated_407_residues MATSGAQRPHGPRSLAEVLDAAWEQAPPPAQSAPRPTAPAPGKPASHDGFLYSGNRHESVPRALFLDRRLTPLERNAWQV IRMQLHADGLTSLPTYEQLRPLLAGMPCGPVASTETIARALTLLRLTRWLSLVRRRRDPRSGRILGNLYVLHDAPLTPFE AMQLDPDYLGLVSQALTHASKAVQHVGQHTLREIAEDPLLRGGVLPTRLQVLSEQLARGVPQPSQEEESYAQDAHIGDSE GGPDDRLRIPSPLSSDSESGRKPAPNHSLRNPMQGRTVRSSVVEERTVPRASAHGGLRLPAQFIGLKDEQQAGALVALQQ VAQEQRQAVLDEWAARCRDRGVRNPAGYLFGIIQKAIRGEFKATAGQAPAPPPHPPPSPAPAPPPKPASKEVARAHLERL RAILRGA >Mature_406_residues ATSGAQRPHGPRSLAEVLDAAWEQAPPPAQSAPRPTAPAPGKPASHDGFLYSGNRHESVPRALFLDRRLTPLERNAWQVI RMQLHADGLTSLPTYEQLRPLLAGMPCGPVASTETIARALTLLRLTRWLSLVRRRRDPRSGRILGNLYVLHDAPLTPFEA MQLDPDYLGLVSQALTHASKAVQHVGQHTLREIAEDPLLRGGVLPTRLQVLSEQLARGVPQPSQEEESYAQDAHIGDSEG GPDDRLRIPSPLSSDSESGRKPAPNHSLRNPMQGRTVRSSVVEERTVPRASAHGGLRLPAQFIGLKDEQQAGALVALQQV AQEQRQAVLDEWAARCRDRGVRNPAGYLFGIIQKAIRGEFKATAGQAPAPPPHPPPSPAPAPPPKPASKEVARAHLERLR AILRGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44216; Mature: 44085
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSGAQRPHGPRSLAEVLDAAWEQAPPPAQSAPRPTAPAPGKPASHDGFLYSGNRHESV CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHH PRALFLDRRLTPLERNAWQVIRMQLHADGLTSLPTYEQLRPLLAGMPCGPVASTETIARA HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHH LTLLRLTRWLSLVRRRRDPRSGRILGNLYVLHDAPLTPFEAMQLDPDYLGLVSQALTHAS HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHH KAVQHVGQHTLREIAEDPLLRGGVLPTRLQVLSEQLARGVPQPSQEEESYAQDAHIGDSE HHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCC GGPDDRLRIPSPLSSDSESGRKPAPNHSLRNPMQGRTVRSSVVEERTVPRASAHGGLRLP CCCCCCEECCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCC AQFIGLKDEQQAGALVALQQVAQEQRQAVLDEWAARCRDRGVRNPAGYLFGIIQKAIRGE HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCH FKATAGQAPAPPPHPPPSPAPAPPPKPASKEVARAHLERLRAILRGA HHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ATSGAQRPHGPRSLAEVLDAAWEQAPPPAQSAPRPTAPAPGKPASHDGFLYSGNRHESV CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHH PRALFLDRRLTPLERNAWQVIRMQLHADGLTSLPTYEQLRPLLAGMPCGPVASTETIARA HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHH LTLLRLTRWLSLVRRRRDPRSGRILGNLYVLHDAPLTPFEAMQLDPDYLGLVSQALTHAS HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHH KAVQHVGQHTLREIAEDPLLRGGVLPTRLQVLSEQLARGVPQPSQEEESYAQDAHIGDSE HHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCC GGPDDRLRIPSPLSSDSESGRKPAPNHSLRNPMQGRTVRSSVVEERTVPRASAHGGLRLP CCCCCCEECCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCC AQFIGLKDEQQAGALVALQQVAQEQRQAVLDEWAARCRDRGVRNPAGYLFGIIQKAIRGE HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCH FKATAGQAPAPPPHPPPSPAPAPPPKPASKEVARAHLERLRAILRGA HHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA