| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242941
Identifier: 21242941
GI number: 21242941
Start: 2590213
End: 2591895
Strand: Direct
Name: 21242941
Synonym: XAC2206
Alternate gene names: NA
Gene position: 2590213-2591895 (Clockwise)
Preceding gene: 21242940
Following gene: 21242942
Centisome position: 50.05
GC content: 69.88
Gene sequence:
>1683_bases TTGATGCCCAGGGGCAGCGATCCGGACATCGCCCGCCAGCTGCTGGCGGACACCTTCCAGCGCAGCGGCCCCGACGCCGG GGCCTTGAGCGATCCGATCGCCGACACGCCGATGGTGGTGACGCTGGAGCAGCTGCGTCCCTACGAACTCAATCCCCGCG TCACCGTCAATCCGCTCTACGCGGAAATCAAGGCATCCATCCGCGAGCGCGGACTCGATACCGCCCCGGCGATCACGCGG CGCCCGGGCGAGTCGCACTACATCATCCGCAACAGCGGCAACACACGGCTCGCGATCCTGCGCGAGCTCTGGGCCGAGAC GAAGGACGAGCGTTTCTTCCGCATTCCCTGCCTGTTCCGCCCCTGGCCCACGCAAGGCGGCATGCGCGGCGAAATCGTCG CCCTCACCGGCCATCTCGCAGAAAACGAGTTGCATGGAACCCTCACGTTCATCGAGCGGGCGCTCGGCGTCGAGAAGGCA CGGGAGCTGTACGAGCAGGAAAGCGGCGGCAAGCCGATGACTCAGGTCGAGCTCGCGCGGCGGTTGGCGGCGGATGGCTA TCCGGTGCCGCAGCCGCACATCAGCCGGATGCGCGACGCGGTGCAGTACCTGCTGCCCGCGATTCCCTCGGTGCTCTATG CGGGCATGGGCCGCCATCAGGTGGAGCGTTTGTCGATGCTGCGCCGGGGGGCCGAGCAGGTCTGGTCGCAGCGCGCGTCC GCGGAGGCGACGGCGTTCGCGGACATCTTCCAGGACGTGCTCGCGGGATTCGACACGGCGCCCGCGGAATTCTCCTTCGA GCGGGTGCGCGATGAGCTGGTCGGCCAGATGGCGCAAGCGCTGGGCGCCGACTACGACGTGCTCGCGCTGGACATCGCGG GCCTGGAAGGCCGGCAACGCGTGCTGCACAGCACGCCGACGCAGCATCCGGCACCTGTGCCCCATCCTTCGATGCCGGCA AGCGACGCGGCGGCCGTCCGGCCAACAGTCCCGCCTGCGGCCGCGGGCACGCCCGCCGCTATTCCATCCGCTAGCCCGGC TACTTTTCCGGGCGACGCGCAGCCCGTGGCCATGCGTACCGGCAGCAGCGAAGCGACCGCTTCGCAAGCCTCGCTGCCGC CCGCATCCGACCCGGTCAAAGAACACACCGCCTCGCCGGCCGCGACCACGGAGCGCCTGCAGTCCATCCAGAAGCTGGTG GCGGACCACCACGGCGAGCCCCTGCCCTCCTTCGCCGACAACGTGGTGCGGGCGATACCCGTCCAGGCGGGCGGCCTCTA CCCCATCTCCGATGTTTGGCACATCGAACCGGGACTGGACACGCCCGACCGGCTGCGCGCCCACATCGTGCAATTCGCGC GCGAGATCGCGAGCGAGGTGGGCGAAGCCGGCCGCATCGCCGCCACGGACCATGGCGGCGTGGGCTACGCCTGCGACGCG CCTTCAGCAACGGGCGGCGAAGAGCCGCGCTCCCCCGCCCTGCTCGCGCTGCTCAACGCCCTGGGAGACACGGCGGATGC GGGACCACTCGCCGAAGCGCTCGAACCCTTGCTGCGCAACCAGGGCAGCATCCCGCGGCTCAGCGACAGCGGCCTGGTGA AGCTGTTTCGCCTGCTGCGCCTGGCACGGCGTCTCTTCGAACTGCAGGCCGGCACCGGTAACGGCACCGGCGCAATGCCA TGA
Upstream 100 bases:
>100_bases TCCACCTCGGCACGCCCGATCCATCCGGCGCCCTGACCGCGGACGCGGCATCGCTGCCGGGGCCGCGGGTGGACAAGCGG CACGGACACGACGGGAGCAT
Downstream 100 bases:
>100_bases CCACGCCGCACCCGCTCAACCAGGCCGTGATCGCCCAGGCGCTGCACGATCTGCGCAACGGGCAGCTGCGCCGCGCGCGT TCCATGGGCTTCGGCGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 560; Mature: 560
Protein sequence:
>560_residues MMPRGSDPDIARQLLADTFQRSGPDAGALSDPIADTPMVVTLEQLRPYELNPRVTVNPLYAEIKASIRERGLDTAPAITR RPGESHYIIRNSGNTRLAILRELWAETKDERFFRIPCLFRPWPTQGGMRGEIVALTGHLAENELHGTLTFIERALGVEKA RELYEQESGGKPMTQVELARRLAADGYPVPQPHISRMRDAVQYLLPAIPSVLYAGMGRHQVERLSMLRRGAEQVWSQRAS AEATAFADIFQDVLAGFDTAPAEFSFERVRDELVGQMAQALGADYDVLALDIAGLEGRQRVLHSTPTQHPAPVPHPSMPA SDAAAVRPTVPPAAAGTPAAIPSASPATFPGDAQPVAMRTGSSEATASQASLPPASDPVKEHTASPAATTERLQSIQKLV ADHHGEPLPSFADNVVRAIPVQAGGLYPISDVWHIEPGLDTPDRLRAHIVQFAREIASEVGEAGRIAATDHGGVGYACDA PSATGGEEPRSPALLALLNALGDTADAGPLAEALEPLLRNQGSIPRLSDSGLVKLFRLLRLARRLFELQAGTGNGTGAMP
Sequences:
>Translated_560_residues MMPRGSDPDIARQLLADTFQRSGPDAGALSDPIADTPMVVTLEQLRPYELNPRVTVNPLYAEIKASIRERGLDTAPAITR RPGESHYIIRNSGNTRLAILRELWAETKDERFFRIPCLFRPWPTQGGMRGEIVALTGHLAENELHGTLTFIERALGVEKA RELYEQESGGKPMTQVELARRLAADGYPVPQPHISRMRDAVQYLLPAIPSVLYAGMGRHQVERLSMLRRGAEQVWSQRAS AEATAFADIFQDVLAGFDTAPAEFSFERVRDELVGQMAQALGADYDVLALDIAGLEGRQRVLHSTPTQHPAPVPHPSMPA SDAAAVRPTVPPAAAGTPAAIPSASPATFPGDAQPVAMRTGSSEATASQASLPPASDPVKEHTASPAATTERLQSIQKLV ADHHGEPLPSFADNVVRAIPVQAGGLYPISDVWHIEPGLDTPDRLRAHIVQFAREIASEVGEAGRIAATDHGGVGYACDA PSATGGEEPRSPALLALLNALGDTADAGPLAEALEPLLRNQGSIPRLSDSGLVKLFRLLRLARRLFELQAGTGNGTGAMP >Mature_560_residues MMPRGSDPDIARQLLADTFQRSGPDAGALSDPIADTPMVVTLEQLRPYELNPRVTVNPLYAEIKASIRERGLDTAPAITR RPGESHYIIRNSGNTRLAILRELWAETKDERFFRIPCLFRPWPTQGGMRGEIVALTGHLAENELHGTLTFIERALGVEKA RELYEQESGGKPMTQVELARRLAADGYPVPQPHISRMRDAVQYLLPAIPSVLYAGMGRHQVERLSMLRRGAEQVWSQRAS AEATAFADIFQDVLAGFDTAPAEFSFERVRDELVGQMAQALGADYDVLALDIAGLEGRQRVLHSTPTQHPAPVPHPSMPA SDAAAVRPTVPPAAAGTPAAIPSASPATFPGDAQPVAMRTGSSEATASQASLPPASDPVKEHTASPAATTERLQSIQKLV ADHHGEPLPSFADNVVRAIPVQAGGLYPISDVWHIEPGLDTPDRLRAHIVQFAREIASEVGEAGRIAATDHGGVGYACDA PSATGGEEPRSPALLALLNALGDTADAGPLAEALEPLLRNQGSIPRLSDSGLVKLFRLLRLARRLFELQAGTGNGTGAMP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59987; Mature: 59987
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPRGSDPDIARQLLADTFQRSGPDAGALSDPIADTPMVVTLEQLRPYELNPRVTVNPLY CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCCEEECHHH AEIKASIRERGLDTAPAITRRPGESHYIIRNSGNTRLAILRELWAETKDERFFRIPCLFR HHHHHHHHHCCCCCCCHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCEEECCEEEC PWPTQGGMRGEIVALTGHLAENELHGTLTFIERALGVEKARELYEQESGGKPMTQVELAR CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH RLAADGYPVPQPHISRMRDAVQYLLPAIPSVLYAGMGRHQVERLSMLRRGAEQVWSQRAS HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AEATAFADIFQDVLAGFDTAPAEFSFERVRDELVGQMAQALGADYDVLALDIAGLEGRQR HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHH VLHSTPTQHPAPVPHPSMPASDAAAVRPTVPPAAAGTPAAIPSASPATFPGDAQPVAMRT HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC GSSEATASQASLPPASDPVKEHTASPAATTERLQSIQKLVADHHGEPLPSFADNVVRAIP CCCHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC VQAGGLYPISDVWHIEPGLDTPDRLRAHIVQFAREIASEVGEAGRIAATDHGGVGYACDA CCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECC PSATGGEEPRSPALLALLNALGDTADAGPLAEALEPLLRNQGSIPRLSDSGLVKLFRLLR CCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH LARRLFELQAGTGNGTGAMP HHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MMPRGSDPDIARQLLADTFQRSGPDAGALSDPIADTPMVVTLEQLRPYELNPRVTVNPLY CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCCEEECHHH AEIKASIRERGLDTAPAITRRPGESHYIIRNSGNTRLAILRELWAETKDERFFRIPCLFR HHHHHHHHHCCCCCCCHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCEEECCEEEC PWPTQGGMRGEIVALTGHLAENELHGTLTFIERALGVEKARELYEQESGGKPMTQVELAR CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH RLAADGYPVPQPHISRMRDAVQYLLPAIPSVLYAGMGRHQVERLSMLRRGAEQVWSQRAS HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AEATAFADIFQDVLAGFDTAPAEFSFERVRDELVGQMAQALGADYDVLALDIAGLEGRQR HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHH VLHSTPTQHPAPVPHPSMPASDAAAVRPTVPPAAAGTPAAIPSASPATFPGDAQPVAMRT HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC GSSEATASQASLPPASDPVKEHTASPAATTERLQSIQKLVADHHGEPLPSFADNVVRAIP CCCHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC VQAGGLYPISDVWHIEPGLDTPDRLRAHIVQFAREIASEVGEAGRIAATDHGGVGYACDA CCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECC PSATGGEEPRSPALLALLNALGDTADAGPLAEALEPLLRNQGSIPRLSDSGLVKLFRLLR CCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH LARRLFELQAGTGNGTGAMP HHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA