| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242931
Identifier: 21242931
GI number: 21242931
Start: 2570188
End: 2572089
Strand: Direct
Name: 21242931
Synonym: XAC2196
Alternate gene names: NA
Gene position: 2570188-2572089 (Clockwise)
Preceding gene: 21242930
Following gene: 21242938
Centisome position: 49.66
GC content: 68.87
Gene sequence:
>1902_bases ATGTTCCGGCCATTCCAGTTATTCCAGCGCGCGGGCAGGCAGGCGTCCACAATCGCCACGACGTGCTCCCCGGAGACGGT GCCAGACCGTGGCTCCGCGCCGGGCTGGAGGACGCCGCTCTCGGCCTCCGAGTTGCTGGCGCCCGTGCGCCGGCAGCAGC TCATCGAGCACATCTGGCAGCGCACCTCGCTGTCGCGAGCGCAGTTCGATGCCCTGTACCTCGCCCCGATCCAGCGCTAC GCCGAAATGGTGCAATTGTTTCCGGCGTCCGAAAGCCACCACCACGCACACCCCGGTGGCATGCTCGACCACGGCCTGGA GATCGTGGCCTACGCGCTCAAGCTGCGGCAGTCGTACCTCTTGCCGGCGGGTGCGACACCCGAATCGCAGGCCGCGCAGG CAGAGGCATGGACAGCGGGGGTGGCCTATGCGGCGCTCCTGCACGACATCGGCAAGATCGCCGTCGATATCGACGTGGAG CAGGAGGACGGCAGCGCTTGGCGCGCATGGCACGGCGTGCTGCGGCAGCCCTATCGCTTCCGCTACCGCTCCGGGCGCGA ATACCGGCTGCACGGCGCCGCGGGCGGCCTGCTGTATGCGCGGGTGCTGGACACGGGGATCCTGGATTGGCTGAGCGGCT TCCCCGACCTGTGGTCGCCGCTGCTCTTCGTGCTGGCGGGACAGAACGAACACGCGGGCGTGCTCGGCGAGCTGGTCGTC CAGGCGGACCAGGCCTCGGTGGCGCAGTCGCTGGGCGGCGACCCCGCCAAGGCCCTGACGGCGCCGCGCCACGCGCTGCA GCGAAAACTGCTGGAAGGGCTGCGTTACCTGCTGCGCGAACAGCTTCAAATCAACCAGCCCCAGGCTTCGGACGGATGGC TGACCCAGGATGCGCTGTGGCTCGTGAGCAAGACGGTCTCGGACAAACTCAGGGCGCACCTGCTCGGCCAAGGCATGGAC GGCATTCCGTCCAGCAATACGGCGGTGTTCGATGTGCTGCAGGACCATGGCATCGCCCTGCCCACGCCGGAGGGCAAGGC CATCTGGCGGGCCTGCGTGGCGAGCGAAAGCGGATGGTCGAACACCTTCACCTTTCTGCGCCTGTCGCCCGCGCTGATCT GGGATGCGGGAGAGCGCCCCGCACCGTTCGCGGGAACCGTGCGGGTGCTGCAGGACGCGGAGTCGGCTCCGCCACCACCG GCCACCCCGCCCCCAGACAACGACCAGGGCGCCATGGTGGCCGAGGGCGCCATGGCCGATGCCACGCCAACGCCATCTGT GCGACAGGATGGTGTCGACGCGCTGCTCTCATTGCTGCAGCCGGATTGGCCCGCTCCACCTTCGGCAGACCACGCCGGCA CCGCACCTGCGGAAGTGCCTGCGCCGCGGAGTCCGCCATGCGAAGCAGCGGAGGAAGAGACTGCGACCGCGACGCGTCCA CCCTCCGGCGCTCCGTCCGGACAGGACTTCATCGCGTGGCTCAGGCACGGCCTGCAGCAGCGCCGCCTCATCCTCAACGA CGCGAAGGCGCTGGTGCATACGGTGGCCGATACCGCTTATCTCGTGAGCCCGGGCGTGTTCCAGCGCTACGCGCAGGAGC ATCCGGCCGTCAGGGCGCTGGCGAAAGGCGAAGACCTTGCCGAGTGGCAATGGGTACAGCGCCAATTCGAGCGGCTGCGT CTGCACCGCAAGCAGGACAACGGGTTGAACATCTGGACCTGCGAGGTCGCGGGTCCCCGAAAAACCCGCCGTCTCCATGG CTACCTGCTGCGCGACCCTCTCTCGGTGCTGTCGGAACCACCGGCCAACAATCCGTATCTGCGCCTGAAGGACGCCCCGC AGAGCGCGCAGGCGCCACCTGGCGGCGCCCGTGGGGATGCACCCGACGCCTCCGGCTCCTGA
Upstream 100 bases:
>100_bases CGCGGGCGCGTTGCGCGAACCTTCGGTGCCGCGCGCCGTCCATGCCCATGGAAGCGGCGAGCATGCGGGCCACACCGGAC GATCCAACGACCGCCATTCC
Downstream 100 bases:
>100_bases AGCCAGGAGGCGTCGGGTCACCTCGACTCACTTCCAGTTCGCGGCCAACGTGGTCTCCAGGCTGCTCTGGTAGTTCGCCG GCAGGCTGGTCTGCCCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Helicase; DNA Helicase; Truncated TraI; Nickase; Type IV Secretion-Like Conjugative Relaxase TraI; Relaxase-Related Protein; Metal Dependent Phosphohydrolase; Conjugal Transfer Protein Tral; Plasmid Conjugative Relaxase; Helicase/Relaxase; HD-Superfamily Hydrolase; Type IV Conjugative Transfer System Protein TraI
Number of amino acids: Translated: 633; Mature: 633
Protein sequence:
>633_residues MFRPFQLFQRAGRQASTIATTCSPETVPDRGSAPGWRTPLSASELLAPVRRQQLIEHIWQRTSLSRAQFDALYLAPIQRY AEMVQLFPASESHHHAHPGGMLDHGLEIVAYALKLRQSYLLPAGATPESQAAQAEAWTAGVAYAALLHDIGKIAVDIDVE QEDGSAWRAWHGVLRQPYRFRYRSGREYRLHGAAGGLLYARVLDTGILDWLSGFPDLWSPLLFVLAGQNEHAGVLGELVV QADQASVAQSLGGDPAKALTAPRHALQRKLLEGLRYLLREQLQINQPQASDGWLTQDALWLVSKTVSDKLRAHLLGQGMD GIPSSNTAVFDVLQDHGIALPTPEGKAIWRACVASESGWSNTFTFLRLSPALIWDAGERPAPFAGTVRVLQDAESAPPPP ATPPPDNDQGAMVAEGAMADATPTPSVRQDGVDALLSLLQPDWPAPPSADHAGTAPAEVPAPRSPPCEAAEEETATATRP PSGAPSGQDFIAWLRHGLQQRRLILNDAKALVHTVADTAYLVSPGVFQRYAQEHPAVRALAKGEDLAEWQWVQRQFERLR LHRKQDNGLNIWTCEVAGPRKTRRLHGYLLRDPLSVLSEPPANNPYLRLKDAPQSAQAPPGGARGDAPDASGS
Sequences:
>Translated_633_residues MFRPFQLFQRAGRQASTIATTCSPETVPDRGSAPGWRTPLSASELLAPVRRQQLIEHIWQRTSLSRAQFDALYLAPIQRY AEMVQLFPASESHHHAHPGGMLDHGLEIVAYALKLRQSYLLPAGATPESQAAQAEAWTAGVAYAALLHDIGKIAVDIDVE QEDGSAWRAWHGVLRQPYRFRYRSGREYRLHGAAGGLLYARVLDTGILDWLSGFPDLWSPLLFVLAGQNEHAGVLGELVV QADQASVAQSLGGDPAKALTAPRHALQRKLLEGLRYLLREQLQINQPQASDGWLTQDALWLVSKTVSDKLRAHLLGQGMD GIPSSNTAVFDVLQDHGIALPTPEGKAIWRACVASESGWSNTFTFLRLSPALIWDAGERPAPFAGTVRVLQDAESAPPPP ATPPPDNDQGAMVAEGAMADATPTPSVRQDGVDALLSLLQPDWPAPPSADHAGTAPAEVPAPRSPPCEAAEEETATATRP PSGAPSGQDFIAWLRHGLQQRRLILNDAKALVHTVADTAYLVSPGVFQRYAQEHPAVRALAKGEDLAEWQWVQRQFERLR LHRKQDNGLNIWTCEVAGPRKTRRLHGYLLRDPLSVLSEPPANNPYLRLKDAPQSAQAPPGGARGDAPDASGS >Mature_633_residues MFRPFQLFQRAGRQASTIATTCSPETVPDRGSAPGWRTPLSASELLAPVRRQQLIEHIWQRTSLSRAQFDALYLAPIQRY AEMVQLFPASESHHHAHPGGMLDHGLEIVAYALKLRQSYLLPAGATPESQAAQAEAWTAGVAYAALLHDIGKIAVDIDVE QEDGSAWRAWHGVLRQPYRFRYRSGREYRLHGAAGGLLYARVLDTGILDWLSGFPDLWSPLLFVLAGQNEHAGVLGELVV QADQASVAQSLGGDPAKALTAPRHALQRKLLEGLRYLLREQLQINQPQASDGWLTQDALWLVSKTVSDKLRAHLLGQGMD GIPSSNTAVFDVLQDHGIALPTPEGKAIWRACVASESGWSNTFTFLRLSPALIWDAGERPAPFAGTVRVLQDAESAPPPP ATPPPDNDQGAMVAEGAMADATPTPSVRQDGVDALLSLLQPDWPAPPSADHAGTAPAEVPAPRSPPCEAAEEETATATRP PSGAPSGQDFIAWLRHGLQQRRLILNDAKALVHTVADTAYLVSPGVFQRYAQEHPAVRALAKGEDLAEWQWVQRQFERLR LHRKQDNGLNIWTCEVAGPRKTRRLHGYLLRDPLSVLSEPPANNPYLRLKDAPQSAQAPPGGARGDAPDASGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68833; Mature: 68833
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRPFQLFQRAGRQASTIATTCSPETVPDRGSAPGWRTPLSASELLAPVRRQQLIEHIWQ CCCHHHHHHHCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RTSLSRAQFDALYLAPIQRYAEMVQLFPASESHHHAHPGGMLDHGLEIVAYALKLRQSYL HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC LPAGATPESQAAQAEAWTAGVAYAALLHDIGKIAVDIDVEQEDGSAWRAWHGVLRQPYRF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHCCCHHH RYRSGREYRLHGAAGGLLYARVLDTGILDWLSGFPDLWSPLLFVLAGQNEHAGVLGELVV HHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHH QADQASVAQSLGGDPAKALTAPRHALQRKLLEGLRYLLREQLQINQPQASDGWLTQDALW HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH LVSKTVSDKLRAHLLGQGMDGIPSSNTAVFDVLQDHGIALPTPEGKAIWRACVASESGWS HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC NTFTFLRLSPALIWDAGERPAPFAGTVRVLQDAESAPPPPATPPPDNDQGAMVAEGAMAD CCEEEEEECCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCC ATPTPSVRQDGVDALLSLLQPDWPAPPSADHAGTAPAEVPAPRSPPCEAAEEETATATRP CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC PSGAPSGQDFIAWLRHGLQQRRLILNDAKALVHTVADTAYLVSPGVFQRYAQEHPAVRAL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHH AKGEDLAEWQWVQRQFERLRLHRKQDNGLNIWTCEVAGPRKTRRLHGYLLRDPLSVLSEP HCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCHHHHHCCC PANNPYLRLKDAPQSAQAPPGGARGDAPDASGS CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFRPFQLFQRAGRQASTIATTCSPETVPDRGSAPGWRTPLSASELLAPVRRQQLIEHIWQ CCCHHHHHHHCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RTSLSRAQFDALYLAPIQRYAEMVQLFPASESHHHAHPGGMLDHGLEIVAYALKLRQSYL HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC LPAGATPESQAAQAEAWTAGVAYAALLHDIGKIAVDIDVEQEDGSAWRAWHGVLRQPYRF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHCCCHHH RYRSGREYRLHGAAGGLLYARVLDTGILDWLSGFPDLWSPLLFVLAGQNEHAGVLGELVV HHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHH QADQASVAQSLGGDPAKALTAPRHALQRKLLEGLRYLLREQLQINQPQASDGWLTQDALW HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH LVSKTVSDKLRAHLLGQGMDGIPSSNTAVFDVLQDHGIALPTPEGKAIWRACVASESGWS HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC NTFTFLRLSPALIWDAGERPAPFAGTVRVLQDAESAPPPPATPPPDNDQGAMVAEGAMAD CCEEEEEECCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCC ATPTPSVRQDGVDALLSLLQPDWPAPPSADHAGTAPAEVPAPRSPPCEAAEEETATATRP CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC PSGAPSGQDFIAWLRHGLQQRRLILNDAKALVHTVADTAYLVSPGVFQRYAQEHPAVRAL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHH AKGEDLAEWQWVQRQFERLRLHRKQDNGLNIWTCEVAGPRKTRRLHGYLLRDPLSVLSEP HCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCHHHHHCCC PANNPYLRLKDAPQSAQAPPGGARGDAPDASGS CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA