Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

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The map label for this gene is 21242931

Identifier: 21242931

GI number: 21242931

Start: 2570188

End: 2572089

Strand: Direct

Name: 21242931

Synonym: XAC2196

Alternate gene names: NA

Gene position: 2570188-2572089 (Clockwise)

Preceding gene: 21242930

Following gene: 21242938

Centisome position: 49.66

GC content: 68.87

Gene sequence:

>1902_bases
ATGTTCCGGCCATTCCAGTTATTCCAGCGCGCGGGCAGGCAGGCGTCCACAATCGCCACGACGTGCTCCCCGGAGACGGT
GCCAGACCGTGGCTCCGCGCCGGGCTGGAGGACGCCGCTCTCGGCCTCCGAGTTGCTGGCGCCCGTGCGCCGGCAGCAGC
TCATCGAGCACATCTGGCAGCGCACCTCGCTGTCGCGAGCGCAGTTCGATGCCCTGTACCTCGCCCCGATCCAGCGCTAC
GCCGAAATGGTGCAATTGTTTCCGGCGTCCGAAAGCCACCACCACGCACACCCCGGTGGCATGCTCGACCACGGCCTGGA
GATCGTGGCCTACGCGCTCAAGCTGCGGCAGTCGTACCTCTTGCCGGCGGGTGCGACACCCGAATCGCAGGCCGCGCAGG
CAGAGGCATGGACAGCGGGGGTGGCCTATGCGGCGCTCCTGCACGACATCGGCAAGATCGCCGTCGATATCGACGTGGAG
CAGGAGGACGGCAGCGCTTGGCGCGCATGGCACGGCGTGCTGCGGCAGCCCTATCGCTTCCGCTACCGCTCCGGGCGCGA
ATACCGGCTGCACGGCGCCGCGGGCGGCCTGCTGTATGCGCGGGTGCTGGACACGGGGATCCTGGATTGGCTGAGCGGCT
TCCCCGACCTGTGGTCGCCGCTGCTCTTCGTGCTGGCGGGACAGAACGAACACGCGGGCGTGCTCGGCGAGCTGGTCGTC
CAGGCGGACCAGGCCTCGGTGGCGCAGTCGCTGGGCGGCGACCCCGCCAAGGCCCTGACGGCGCCGCGCCACGCGCTGCA
GCGAAAACTGCTGGAAGGGCTGCGTTACCTGCTGCGCGAACAGCTTCAAATCAACCAGCCCCAGGCTTCGGACGGATGGC
TGACCCAGGATGCGCTGTGGCTCGTGAGCAAGACGGTCTCGGACAAACTCAGGGCGCACCTGCTCGGCCAAGGCATGGAC
GGCATTCCGTCCAGCAATACGGCGGTGTTCGATGTGCTGCAGGACCATGGCATCGCCCTGCCCACGCCGGAGGGCAAGGC
CATCTGGCGGGCCTGCGTGGCGAGCGAAAGCGGATGGTCGAACACCTTCACCTTTCTGCGCCTGTCGCCCGCGCTGATCT
GGGATGCGGGAGAGCGCCCCGCACCGTTCGCGGGAACCGTGCGGGTGCTGCAGGACGCGGAGTCGGCTCCGCCACCACCG
GCCACCCCGCCCCCAGACAACGACCAGGGCGCCATGGTGGCCGAGGGCGCCATGGCCGATGCCACGCCAACGCCATCTGT
GCGACAGGATGGTGTCGACGCGCTGCTCTCATTGCTGCAGCCGGATTGGCCCGCTCCACCTTCGGCAGACCACGCCGGCA
CCGCACCTGCGGAAGTGCCTGCGCCGCGGAGTCCGCCATGCGAAGCAGCGGAGGAAGAGACTGCGACCGCGACGCGTCCA
CCCTCCGGCGCTCCGTCCGGACAGGACTTCATCGCGTGGCTCAGGCACGGCCTGCAGCAGCGCCGCCTCATCCTCAACGA
CGCGAAGGCGCTGGTGCATACGGTGGCCGATACCGCTTATCTCGTGAGCCCGGGCGTGTTCCAGCGCTACGCGCAGGAGC
ATCCGGCCGTCAGGGCGCTGGCGAAAGGCGAAGACCTTGCCGAGTGGCAATGGGTACAGCGCCAATTCGAGCGGCTGCGT
CTGCACCGCAAGCAGGACAACGGGTTGAACATCTGGACCTGCGAGGTCGCGGGTCCCCGAAAAACCCGCCGTCTCCATGG
CTACCTGCTGCGCGACCCTCTCTCGGTGCTGTCGGAACCACCGGCCAACAATCCGTATCTGCGCCTGAAGGACGCCCCGC
AGAGCGCGCAGGCGCCACCTGGCGGCGCCCGTGGGGATGCACCCGACGCCTCCGGCTCCTGA

Upstream 100 bases:

>100_bases
CGCGGGCGCGTTGCGCGAACCTTCGGTGCCGCGCGCCGTCCATGCCCATGGAAGCGGCGAGCATGCGGGCCACACCGGAC
GATCCAACGACCGCCATTCC

Downstream 100 bases:

>100_bases
AGCCAGGAGGCGTCGGGTCACCTCGACTCACTTCCAGTTCGCGGCCAACGTGGTCTCCAGGCTGCTCTGGTAGTTCGCCG
GCAGGCTGGTCTGCCCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Helicase; DNA Helicase; Truncated TraI; Nickase; Type IV Secretion-Like Conjugative Relaxase TraI; Relaxase-Related Protein; Metal Dependent Phosphohydrolase; Conjugal Transfer Protein Tral; Plasmid Conjugative Relaxase; Helicase/Relaxase; HD-Superfamily Hydrolase; Type IV Conjugative Transfer System Protein TraI

Number of amino acids: Translated: 633; Mature: 633

Protein sequence:

>633_residues
MFRPFQLFQRAGRQASTIATTCSPETVPDRGSAPGWRTPLSASELLAPVRRQQLIEHIWQRTSLSRAQFDALYLAPIQRY
AEMVQLFPASESHHHAHPGGMLDHGLEIVAYALKLRQSYLLPAGATPESQAAQAEAWTAGVAYAALLHDIGKIAVDIDVE
QEDGSAWRAWHGVLRQPYRFRYRSGREYRLHGAAGGLLYARVLDTGILDWLSGFPDLWSPLLFVLAGQNEHAGVLGELVV
QADQASVAQSLGGDPAKALTAPRHALQRKLLEGLRYLLREQLQINQPQASDGWLTQDALWLVSKTVSDKLRAHLLGQGMD
GIPSSNTAVFDVLQDHGIALPTPEGKAIWRACVASESGWSNTFTFLRLSPALIWDAGERPAPFAGTVRVLQDAESAPPPP
ATPPPDNDQGAMVAEGAMADATPTPSVRQDGVDALLSLLQPDWPAPPSADHAGTAPAEVPAPRSPPCEAAEEETATATRP
PSGAPSGQDFIAWLRHGLQQRRLILNDAKALVHTVADTAYLVSPGVFQRYAQEHPAVRALAKGEDLAEWQWVQRQFERLR
LHRKQDNGLNIWTCEVAGPRKTRRLHGYLLRDPLSVLSEPPANNPYLRLKDAPQSAQAPPGGARGDAPDASGS

Sequences:

>Translated_633_residues
MFRPFQLFQRAGRQASTIATTCSPETVPDRGSAPGWRTPLSASELLAPVRRQQLIEHIWQRTSLSRAQFDALYLAPIQRY
AEMVQLFPASESHHHAHPGGMLDHGLEIVAYALKLRQSYLLPAGATPESQAAQAEAWTAGVAYAALLHDIGKIAVDIDVE
QEDGSAWRAWHGVLRQPYRFRYRSGREYRLHGAAGGLLYARVLDTGILDWLSGFPDLWSPLLFVLAGQNEHAGVLGELVV
QADQASVAQSLGGDPAKALTAPRHALQRKLLEGLRYLLREQLQINQPQASDGWLTQDALWLVSKTVSDKLRAHLLGQGMD
GIPSSNTAVFDVLQDHGIALPTPEGKAIWRACVASESGWSNTFTFLRLSPALIWDAGERPAPFAGTVRVLQDAESAPPPP
ATPPPDNDQGAMVAEGAMADATPTPSVRQDGVDALLSLLQPDWPAPPSADHAGTAPAEVPAPRSPPCEAAEEETATATRP
PSGAPSGQDFIAWLRHGLQQRRLILNDAKALVHTVADTAYLVSPGVFQRYAQEHPAVRALAKGEDLAEWQWVQRQFERLR
LHRKQDNGLNIWTCEVAGPRKTRRLHGYLLRDPLSVLSEPPANNPYLRLKDAPQSAQAPPGGARGDAPDASGS
>Mature_633_residues
MFRPFQLFQRAGRQASTIATTCSPETVPDRGSAPGWRTPLSASELLAPVRRQQLIEHIWQRTSLSRAQFDALYLAPIQRY
AEMVQLFPASESHHHAHPGGMLDHGLEIVAYALKLRQSYLLPAGATPESQAAQAEAWTAGVAYAALLHDIGKIAVDIDVE
QEDGSAWRAWHGVLRQPYRFRYRSGREYRLHGAAGGLLYARVLDTGILDWLSGFPDLWSPLLFVLAGQNEHAGVLGELVV
QADQASVAQSLGGDPAKALTAPRHALQRKLLEGLRYLLREQLQINQPQASDGWLTQDALWLVSKTVSDKLRAHLLGQGMD
GIPSSNTAVFDVLQDHGIALPTPEGKAIWRACVASESGWSNTFTFLRLSPALIWDAGERPAPFAGTVRVLQDAESAPPPP
ATPPPDNDQGAMVAEGAMADATPTPSVRQDGVDALLSLLQPDWPAPPSADHAGTAPAEVPAPRSPPCEAAEEETATATRP
PSGAPSGQDFIAWLRHGLQQRRLILNDAKALVHTVADTAYLVSPGVFQRYAQEHPAVRALAKGEDLAEWQWVQRQFERLR
LHRKQDNGLNIWTCEVAGPRKTRRLHGYLLRDPLSVLSEPPANNPYLRLKDAPQSAQAPPGGARGDAPDASGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68833; Mature: 68833

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRPFQLFQRAGRQASTIATTCSPETVPDRGSAPGWRTPLSASELLAPVRRQQLIEHIWQ
CCCHHHHHHHCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RTSLSRAQFDALYLAPIQRYAEMVQLFPASESHHHAHPGGMLDHGLEIVAYALKLRQSYL
HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
LPAGATPESQAAQAEAWTAGVAYAALLHDIGKIAVDIDVEQEDGSAWRAWHGVLRQPYRF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHCCCHHH
RYRSGREYRLHGAAGGLLYARVLDTGILDWLSGFPDLWSPLLFVLAGQNEHAGVLGELVV
HHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHH
QADQASVAQSLGGDPAKALTAPRHALQRKLLEGLRYLLREQLQINQPQASDGWLTQDALW
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
LVSKTVSDKLRAHLLGQGMDGIPSSNTAVFDVLQDHGIALPTPEGKAIWRACVASESGWS
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
NTFTFLRLSPALIWDAGERPAPFAGTVRVLQDAESAPPPPATPPPDNDQGAMVAEGAMAD
CCEEEEEECCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCC
ATPTPSVRQDGVDALLSLLQPDWPAPPSADHAGTAPAEVPAPRSPPCEAAEEETATATRP
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
PSGAPSGQDFIAWLRHGLQQRRLILNDAKALVHTVADTAYLVSPGVFQRYAQEHPAVRAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHH
AKGEDLAEWQWVQRQFERLRLHRKQDNGLNIWTCEVAGPRKTRRLHGYLLRDPLSVLSEP
HCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCHHHHHCCC
PANNPYLRLKDAPQSAQAPPGGARGDAPDASGS
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFRPFQLFQRAGRQASTIATTCSPETVPDRGSAPGWRTPLSASELLAPVRRQQLIEHIWQ
CCCHHHHHHHCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RTSLSRAQFDALYLAPIQRYAEMVQLFPASESHHHAHPGGMLDHGLEIVAYALKLRQSYL
HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
LPAGATPESQAAQAEAWTAGVAYAALLHDIGKIAVDIDVEQEDGSAWRAWHGVLRQPYRF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHCCCHHH
RYRSGREYRLHGAAGGLLYARVLDTGILDWLSGFPDLWSPLLFVLAGQNEHAGVLGELVV
HHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHH
QADQASVAQSLGGDPAKALTAPRHALQRKLLEGLRYLLREQLQINQPQASDGWLTQDALW
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
LVSKTVSDKLRAHLLGQGMDGIPSSNTAVFDVLQDHGIALPTPEGKAIWRACVASESGWS
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
NTFTFLRLSPALIWDAGERPAPFAGTVRVLQDAESAPPPPATPPPDNDQGAMVAEGAMAD
CCEEEEEECCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCC
ATPTPSVRQDGVDALLSLLQPDWPAPPSADHAGTAPAEVPAPRSPPCEAAEEETATATRP
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
PSGAPSGQDFIAWLRHGLQQRRLILNDAKALVHTVADTAYLVSPGVFQRYAQEHPAVRAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHH
AKGEDLAEWQWVQRQFERLRLHRKQDNGLNIWTCEVAGPRKTRRLHGYLLRDPLSVLSEP
HCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCHHHHHCCC
PANNPYLRLKDAPQSAQAPPGGARGDAPDASGS
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA