| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yciE [H]
Identifier: 21242890
GI number: 21242890
Start: 2525627
End: 2526136
Strand: Reverse
Name: yciE [H]
Synonym: XAC2155
Alternate gene names: 21242890
Gene position: 2526136-2525627 (Counterclockwise)
Preceding gene: 21242891
Following gene: 21242889
Centisome position: 48.81
GC content: 63.73
Gene sequence:
>510_bases ATGGCCGAACCCCAAGAAAACCTGATGGACTGGCTGCGCGATGCGCATGCAATGGAGCAGCAGGCCGAGCAGATGCTCAA GGCCCAGGCCGCACGCATCGAGCACTACCCCCAGCTCAAAGCCCGCATCGAGCAGCATCTGGAAGAGACGCTGGGGCAAC AGCGCTTGGTCGAGTCGTGTATCGAGCGCCTGGGCGGTTCGCCGTCGATCATCAAGGACGCCATGGGCAAGATGGCCGCA TTCGGGCAGGCGATGGGCGGCATGACCACCTCCGACGAAATCGTCAAGGGCGCGATGGCCAGCTACGTGTTCGAGAACCT GGAGATCGCCACCTACACCGCGTTGCTGGGTGCCGCCAAGACGGTGGGCGATACCGAAACGCAGCGCGTGTGCGAGCAGA TCCTGCCCCAGGAGCAGGCCATGGCCGACTGGCTGCTGGCGCATCTGCCGGAGTTGACTGAAGAGTTCCTGGTCCGCGAC GCCACCCCAGGGGTCACCGCAAAGAAGTAA
Upstream 100 bases:
>100_bases ATGGCACGTAGACGGCGCACGCAGCGTTCACTTGGAACAGTCACATCTTTCATCCGCGCCGCTGCAGGCTGGACATATCG CAAACAAACAGGAGAACCCC
Downstream 100 bases:
>100_bases ACGTCAGCTGCGCAGGTTTCATCGGCCCCGCAGTGCGGGGCCTTTTTGCTTCTGCGTCCAGAGCGCTTACCCTTGGCGCC TTCCTCGCACCGATACCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MAEPQENLMDWLRDAHAMEQQAEQMLKAQAARIEHYPQLKARIEQHLEETLGQQRLVESCIERLGGSPSIIKDAMGKMAA FGQAMGGMTTSDEIVKGAMASYVFENLEIATYTALLGAAKTVGDTETQRVCEQILPQEQAMADWLLAHLPELTEEFLVRD ATPGVTAKK
Sequences:
>Translated_169_residues MAEPQENLMDWLRDAHAMEQQAEQMLKAQAARIEHYPQLKARIEQHLEETLGQQRLVESCIERLGGSPSIIKDAMGKMAA FGQAMGGMTTSDEIVKGAMASYVFENLEIATYTALLGAAKTVGDTETQRVCEQILPQEQAMADWLLAHLPELTEEFLVRD ATPGVTAKK >Mature_168_residues AEPQENLMDWLRDAHAMEQQAEQMLKAQAARIEHYPQLKARIEQHLEETLGQQRLVESCIERLGGSPSIIKDAMGKMAAF GQAMGGMTTSDEIVKGAMASYVFENLEIATYTALLGAAKTVGDTETQRVCEQILPQEQAMADWLLAHLPELTEEFLVRDA TPGVTAKK
Specific function: Unknown
COG id: COG3685
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787511, Length=164, Percent_Identity=56.7073170731707, Blast_Score=195, Evalue=1e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010287 - InterPro: IPR012347 - InterPro: IPR009078 [H]
Pfam domain/function: PF05974 DUF892 [H]
EC number: NA
Molecular weight: Translated: 18704; Mature: 18572
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPQENLMDWLRDAHAMEQQAEQMLKAQAARIEHYPQLKARIEQHLEETLGQQRLVESC CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IERLGGSPSIIKDAMGKMAAFGQAMGGMTTSDEIVKGAMASYVFENLEIATYTALLGAAK HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVGDTETQRVCEQILPQEQAMADWLLAHLPELTEEFLVRDATPGVTAKK HCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure AEPQENLMDWLRDAHAMEQQAEQMLKAQAARIEHYPQLKARIEQHLEETLGQQRLVESC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IERLGGSPSIIKDAMGKMAAFGQAMGGMTTSDEIVKGAMASYVFENLEIATYTALLGAAK HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVGDTETQRVCEQILPQEQAMADWLLAHLPELTEEFLVRDATPGVTAKK HCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3058546; 9097039; 9278503; 8455549 [H]