| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242888
Identifier: 21242888
GI number: 21242888
Start: 2523503
End: 2524093
Strand: Reverse
Name: 21242888
Synonym: XAC2153
Alternate gene names: NA
Gene position: 2524093-2523503 (Counterclockwise)
Preceding gene: 21242889
Following gene: 21242886
Centisome position: 48.77
GC content: 64.97
Gene sequence:
>591_bases ATGGCGCAGGACAGCAGCTGGCACGCAGGAACCTGGCTCAACCGGCCGAAGACACTCGCGATCAACGGCGACACGTTGGA TGTGGTGACCGACCAGGCGACCGACTTCTGGCGCAAGACGCACTACGGATTCACCCGCGACAGCGGGCACTTTCTGGGCA TCAGGGCCGGCGCAGGCTTCACCGCGCAGCTGCGTGCGCGCGCGCAGTACGAAGCCTTGTACGATCAGGCCGGCATCATG GTGCGCGTTGACGAGCAGCACTGGGTCAAGGCCGGGATCGAACTCAGCGACGGGCGTGCCATGCTCAGCAGCGTGTTGAC CAACCCGGTATCGGATTGGGCAACTGGTCCTTACGAAGCCGACCCCAAGGATTTCTGGATCCGTGCCACGGTTGCCGACG GTGTGCTACGCCTGCAGGTCTCTGCGGACGGCCGTCGCTGGCCGTTGGTGCGGCTGTGCCCATTCCCGCCAGCAAGCGTC TATCTGGTCGGGCCGATGTGCTGTACGCCCGAGCGCGCCGGGCTGAAGGTGCGGTTCTCCGATTGGGCACTGAGTGCGCC GCTAGCCAAGGACCTGCACGATCTCAGTTGA
Upstream 100 bases:
>100_bases CGATGCATTCCATGGCGCACGCAGGCGCGTGTTGGCTGGCGTGGTCGGGATGACGCTCAGTGGTGGCGCGTGTGCACAAC AGACCAACCCGAGGAACACC
Downstream 100 bases:
>100_bases GCGGGGCTTTGCTGCATTGCAGGCAAGAGTTCGGACGTGCATCGCATCACAAGGCATCGCGCATGCAACCGCACAGCGGC GCGGTGCGATTGCCTGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MAQDSSWHAGTWLNRPKTLAINGDTLDVVTDQATDFWRKTHYGFTRDSGHFLGIRAGAGFTAQLRARAQYEALYDQAGIM VRVDEQHWVKAGIELSDGRAMLSSVLTNPVSDWATGPYEADPKDFWIRATVADGVLRLQVSADGRRWPLVRLCPFPPASV YLVGPMCCTPERAGLKVRFSDWALSAPLAKDLHDLS
Sequences:
>Translated_196_residues MAQDSSWHAGTWLNRPKTLAINGDTLDVVTDQATDFWRKTHYGFTRDSGHFLGIRAGAGFTAQLRARAQYEALYDQAGIM VRVDEQHWVKAGIELSDGRAMLSSVLTNPVSDWATGPYEADPKDFWIRATVADGVLRLQVSADGRRWPLVRLCPFPPASV YLVGPMCCTPERAGLKVRFSDWALSAPLAKDLHDLS >Mature_195_residues AQDSSWHAGTWLNRPKTLAINGDTLDVVTDQATDFWRKTHYGFTRDSGHFLGIRAGAGFTAQLRARAQYEALYDQAGIMV RVDEQHWVKAGIELSDGRAMLSSVLTNPVSDWATGPYEADPKDFWIRATVADGVLRLQVSADGRRWPLVRLCPFPPASVY LVGPMCCTPERAGLKVRFSDWALSAPLAKDLHDLS
Specific function: Unknown
COG id: COG3506
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322244, Length=195, Percent_Identity=62.0512820512821, Blast_Score=270, Evalue=1e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21748; Mature: 21617
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQDSSWHAGTWLNRPKTLAINGDTLDVVTDQATDFWRKTHYGFTRDSGHFLGIRAGAGF CCCCCCCCCCCCCCCCEEEEECCCEEEEEECCHHHHHHHHCCCCCCCCCCEEEEECCCCC TAQLRARAQYEALYDQAGIMVRVDEQHWVKAGIELSDGRAMLSSVLTNPVSDWATGPYEA EEEHHHHHHHHHHHHCCCEEEEECCCCEEEECCEECCCHHHHHHHHCCCCHHHCCCCCCC DPKDFWIRATVADGVLRLQVSADGRRWPLVRLCPFPPASVYLVGPMCCTPERAGLKVRFS CCCCEEEEEEECCCEEEEEECCCCCCCCEEEECCCCCCCEEEECCEECCCCCCCEEEEEC DWALSAPLAKDLHDLS CCEECCCHHHHHHHCC >Mature Secondary Structure AQDSSWHAGTWLNRPKTLAINGDTLDVVTDQATDFWRKTHYGFTRDSGHFLGIRAGAGF CCCCCCCCCCCCCCCEEEEECCCEEEEEECCHHHHHHHHCCCCCCCCCCEEEEECCCCC TAQLRARAQYEALYDQAGIMVRVDEQHWVKAGIELSDGRAMLSSVLTNPVSDWATGPYEA EEEHHHHHHHHHHHHCCCEEEEECCCCEEEECCEECCCHHHHHHHHCCCCHHHCCCCCCC DPKDFWIRATVADGVLRLQVSADGRRWPLVRLCPFPPASVYLVGPMCCTPERAGLKVRFS CCCCEEEEEEECCCEEEEEECCCCCCCCEEEECCCCCCCEEEECCEECCCCCCCEEEEEC DWALSAPLAKDLHDLS CCEECCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA