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The map label for this gene is yqaA [H]

Identifier: 21242869

GI number: 21242869

Start: 2490260

End: 2490682

Strand: Direct

Name: yqaA [H]

Synonym: XAC2134

Alternate gene names: 21242869

Gene position: 2490260-2490682 (Clockwise)

Preceding gene: 21242868

Following gene: 21242870

Centisome position: 48.12

GC content: 65.25

Gene sequence:

>423_bases
TTGACCTATTTCTCGCTCTTTGTCGTGTCGCTGATTGCCGCTACCCTGCTGCCGGCGCAATCGGAGGCCGTGCTGGTGGC
ATTGCTGCTGGACGGCGGTTCCGCGGTTGGCCTGGTGGTGGTTGCAAGCCTCGGCAACGTCCTGGGGTCGTTGATCAATT
GGTGGATCGGGCGGGAGGCGGTGCGTTTCCAGGGGCGCCGGTGGTTCCCCATCAAGCCCGACGCCTTGCTGCGTGCGCAA
GCCTGGTACCGCAGGTATGGCAAGTGGTCGCTGCTACTGAGCTGGATGCCGGTCATCGGCGACCCGCTCACGCTGGCTGC
CGGGGTCATGCACGAGCCGCTGCGTGCGGTGGTGCCGTTGCTGGTCGTTGCCAAGACCACGCGTTATGCCGTGGTTGCAT
GGGCGACCCTTGCGGTTGCCTGA

Upstream 100 bases:

>100_bases
CGTTGTCGACCTGCCTTGGCCGCTCACAAACACGCGATCAATCAAGATTGGGCTTGATTCGTATCATGCTGCTGTCACCG
ACTTTTTCCCAAGGCTGCCC

Downstream 100 bases:

>100_bases
TGACTGGCTGCCTTTGCAGATGCTGCCTGACCTGAAAGCGCCGGATTCCGGTGCCCACGAGCGCTTAACGCAAACCACCT
ATGCTGTCGGCGCTGCGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTYFSLFVVSLIAATLLPAQSEAVLVALLLDGGSAVGLVVVASLGNVLGSLINWWIGREAVRFQGRRWFPIKPDALLRAQ
AWYRRYGKWSLLLSWMPVIGDPLTLAAGVMHEPLRAVVPLLVVAKTTRYAVVAWATLAVA

Sequences:

>Translated_140_residues
MTYFSLFVVSLIAATLLPAQSEAVLVALLLDGGSAVGLVVVASLGNVLGSLINWWIGREAVRFQGRRWFPIKPDALLRAQ
AWYRRYGKWSLLLSWMPVIGDPLTLAAGVMHEPLRAVVPLLVVAKTTRYAVVAWATLAVA
>Mature_139_residues
TYFSLFVVSLIAATLLPAQSEAVLVALLLDGGSAVGLVVVASLGNVLGSLINWWIGREAVRFQGRRWFPIKPDALLRAQA
WYRRYGKWSLLLSWMPVIGDPLTLAAGVMHEPLRAVVPLLVVAKTTRYAVVAWATLAVA

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=139, Percent_Identity=44.6043165467626, Blast_Score=91, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 15256; Mature: 15125

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYFSLFVVSLIAATLLPAQSEAVLVALLLDGGSAVGLVVVASLGNVLGSLINWWIGREA
CHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHH
VRFQGRRWFPIKPDALLRAQAWYRRYGKWSLLLSWMPVIGDPLTLAAGVMHEPLRAVVPL
HHHCCCEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LVVAKTTRYAVVAWATLAVA
HHHHHCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TYFSLFVVSLIAATLLPAQSEAVLVALLLDGGSAVGLVVVASLGNVLGSLINWWIGREA
HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHH
VRFQGRRWFPIKPDALLRAQAWYRRYGKWSLLLSWMPVIGDPLTLAAGVMHEPLRAVVPL
HHHCCCEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LVVAKTTRYAVVAWATLAVA
HHHHHCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]