| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is mdmC [H]
Identifier: 21242856
GI number: 21242856
Start: 2477938
End: 2478576
Strand: Direct
Name: mdmC [H]
Synonym: XAC2121
Alternate gene names: 21242856
Gene position: 2477938-2478576 (Clockwise)
Preceding gene: 21242855
Following gene: 77748630
Centisome position: 47.88
GC content: 62.91
Gene sequence:
>639_bases ATGCCAAGGCCATGGCACACACTGCATCAATCAACAGACGGTCAAGGCATGCGCACGTTGCGGGATTTGAAAGAGGAACT GTCGCGCTTCGGGGCCGACAACGATGCGGTGGAAACCGCGCGTGGCAAACGCATGTTGAATATCACCCCAGAAACCGGCG AACTGCTCGCCCTGCTCGTGCATGCGACGGGGGCGCGGCAGGTGGTAGAGGTGGGCACTTCGAATGGCTACTCCACGCTA TGGCTGGCCGAAGCTGTCATCGTCGTCGGTGGACACGTCATCACGCTGGAACATGCCGAGGACAAGGCCGCCCTGGCGGC TGCGAACTTCGTGCGTGCCGGACTACGGGCACACATCACACAGGTGCTGGGCGATGCAGGCGCATGGTTGGAGACTGTCG ACGATGGCAGCGTCGACCTGTTGTTCTTGGACGCGGACCGCGGTGCCTATGCGCGGTGGTGGCCGCAGCTGCGCCGTGTG CTCAAGCGCGGTACTGGCCTGTTGGTGGTGGACAACGCCACCTCGCACGCGACGGAGATGGCAGCTTTCATGCAGGCTGT CCGTGCCGACATATCCTTCCGATGCAGCGAGCTGCCGGTCGGCAACGGACAGTTCATGGCAGTGCGCGTCGCAGACTGA
Upstream 100 bases:
>100_bases GAATAGCAAATAGCGAATAGCGAGCACTCTGTATCAGGCAGGCGCGTCGCGCATCCGGTTCGCTCGCATCACGGTGCAGT GCACTAGGCGTTGAATGGCG
Downstream 100 bases:
>100_bases ATGGCTAGCGGCGTCCGCACGGCGGCTAAGTGCTCGATGATTCCAACCGGTGCTGTTGCGTGGTTGTTCTGCTGAGGGGC AGTCCGTCGATTCTTTGCGG
Product: O-methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MPRPWHTLHQSTDGQGMRTLRDLKEELSRFGADNDAVETARGKRMLNITPETGELLALLVHATGARQVVEVGTSNGYSTL WLAEAVIVVGGHVITLEHAEDKAALAAANFVRAGLRAHITQVLGDAGAWLETVDDGSVDLLFLDADRGAYARWWPQLRRV LKRGTGLLVVDNATSHATEMAAFMQAVRADISFRCSELPVGNGQFMAVRVAD
Sequences:
>Translated_212_residues MPRPWHTLHQSTDGQGMRTLRDLKEELSRFGADNDAVETARGKRMLNITPETGELLALLVHATGARQVVEVGTSNGYSTL WLAEAVIVVGGHVITLEHAEDKAALAAANFVRAGLRAHITQVLGDAGAWLETVDDGSVDLLFLDADRGAYARWWPQLRRV LKRGTGLLVVDNATSHATEMAAFMQAVRADISFRCSELPVGNGQFMAVRVAD >Mature_211_residues PRPWHTLHQSTDGQGMRTLRDLKEELSRFGADNDAVETARGKRMLNITPETGELLALLVHATGARQVVEVGTSNGYSTLW LAEAVIVVGGHVITLEHAEDKAALAAANFVRAGLRAHITQVLGDAGAWLETVDDGSVDLLFLDADRGAYARWWPQLRRVL KRGTGLLVVDNATSHATEMAAFMQAVRADISFRCSELPVGNGQFMAVRVAD
Specific function: 4-O-methyltransferase for the lactone ring of midecamycin and other macrolide antibiotics [H]
COG id: COG4122
COG function: function code R; Predicted O-methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. Type 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002935 [H]
Pfam domain/function: PF01596 Methyltransf_3 [H]
EC number: NA
Molecular weight: Translated: 23027; Mature: 22896
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPWHTLHQSTDGQGMRTLRDLKEELSRFGADNDAVETARGKRMLNITPETGELLALLV CCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEECCCHHHHHHHHH HATGARQVVEVGTSNGYSTLWLAEAVIVVGGHVITLEHAEDKAALAAANFVRAGLRAHIT HCCCCHHEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH QVLGDAGAWLETVDDGSVDLLFLDADRGAYARWWPQLRRVLKRGTGLLVVDNATSHATEM HHHCCCCCCEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH AAFMQAVRADISFRCSELPVGNGQFMAVRVAD HHHHHHHHHHHCEECCCCCCCCCCEEEEEECC >Mature Secondary Structure PRPWHTLHQSTDGQGMRTLRDLKEELSRFGADNDAVETARGKRMLNITPETGELLALLV CCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEECCCHHHHHHHHH HATGARQVVEVGTSNGYSTLWLAEAVIVVGGHVITLEHAEDKAALAAANFVRAGLRAHIT HCCCCHHEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH QVLGDAGAWLETVDDGSVDLLFLDADRGAYARWWPQLRRVLKRGTGLLVVDNATSHATEM HHHCCCCCCEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH AAFMQAVRADISFRCSELPVGNGQFMAVRVAD HHHHHHHHHHHCEECCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1629172 [H]