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The map label for this gene is cycM

Identifier: 21242801

GI number: 21242801

Start: 2405631

End: 2406035

Strand: Reverse

Name: cycM

Synonym: XAC2062

Alternate gene names: NA

Gene position: 2406035-2405631 (Counterclockwise)

Preceding gene: 21242802

Following gene: 21242799

Centisome position: 46.49

GC content: 68.15

Gene sequence:

>405_bases
ATGGCGGCCTGCTCCCAATCCCAGGTTGAGTCCACCGATCACTCCGCTGGCGATCCCGGTCACGCCAGCGGCGAACACGG
CTCCGGCTCGTCGGCAGGTCTGCCCACCGGCCGCGCCGACGCCGGCGACAAACTCGCCCATGCCAAGGGCAAGGCGACCG
GCCAGAGCTGCGTGGACTGCCACGGTGCCGATGGCAATGCGCCGATCGATCCCAGCTATCCCAAACTGGGCGGCCAATAC
GGCGACTACCTTGCGCATGCGCTGCAGGCCTACCGTAGCGGCGACCGTCAGCATCCGTTGATGACCGCCCAGGCCACCGC
GCTGAGCGATCAGGACATCGCCGACCTGGCAGCGTACTTCGGCGCGCGGCAGACGCAGTTGCGCGATCTGCACGGCGTCA
ACTGA

Upstream 100 bases:

>100_bases
CCGACATCTCCGCCTTTCTGTCCACCCTCAAGTAAGCGCCCACATGCCGAACGCCCTGCACGCTCCGCGTCTAGCCATCG
CCCTGGTCGCTGCCCTGATG

Downstream 100 bases:

>100_bases
GTCTGAGGCGACGCCACACCGTCTCATTCGGAATGAAAAAGCGCTTGCGCGAACATTAACAGGCCGCTATCATTTCGTTC
TCAGTTTCGTGGGGCCATAG

Product: cytochrome C552

Products: NA

Alternate protein names: Cytochrome c554 [H]

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MAACSQSQVESTDHSAGDPGHASGEHGSGSSAGLPTGRADAGDKLAHAKGKATGQSCVDCHGADGNAPIDPSYPKLGGQY
GDYLAHALQAYRSGDRQHPLMTAQATALSDQDIADLAAYFGARQTQLRDLHGVN

Sequences:

>Translated_134_residues
MAACSQSQVESTDHSAGDPGHASGEHGSGSSAGLPTGRADAGDKLAHAKGKATGQSCVDCHGADGNAPIDPSYPKLGGQY
GDYLAHALQAYRSGDRQHPLMTAQATALSDQDIADLAAYFGARQTQLRDLHGVN
>Mature_133_residues
AACSQSQVESTDHSAGDPGHASGEHGSGSSAGLPTGRADAGDKLAHAKGKATGQSCVDCHGADGNAPIDPSYPKLGGQYG
DYLAHALQAYRSGDRQHPLMTAQATALSDQDIADLAAYFGARQTQLRDLHGVN

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 13688; Mature: 13557

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAACSQSQVESTDHSAGDPGHASGEHGSGSSAGLPTGRADAGDKLAHAKGKATGQSCVDC
CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHCC
HGADGNAPIDPSYPKLGGQYGDYLAHALQAYRSGDRQHPLMTAQATALSDQDIADLAAYF
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHH
GARQTQLRDLHGVN
CCCHHHHHHHCCCC
>Mature Secondary Structure 
AACSQSQVESTDHSAGDPGHASGEHGSGSSAGLPTGRADAGDKLAHAKGKATGQSCVDC
CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHCC
HGADGNAPIDPSYPKLGGQYGDYLAHALQAYRSGDRQHPLMTAQATALSDQDIADLAAYF
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHH
GARQTQLRDLHGVN
CCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2829828 [H]