| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242773
Identifier: 21242773
GI number: 21242773
Start: 2374203
End: 2374940
Strand: Reverse
Name: 21242773
Synonym: XAC2029
Alternate gene names: NA
Gene position: 2374940-2374203 (Counterclockwise)
Preceding gene: 21242775
Following gene: 21242767
Centisome position: 45.89
GC content: 61.52
Gene sequence:
>738_bases TTGATCTGCGTTGCGCTCTGCGCCAGTTGCTCGCGCAGCCCGCCGTCGGTCACCCCGCCGGGCGCACCGGAAAGTGCCAA GACCAATGTGCTGGAAGCCGGCGCGAAAGTGCTGCAACCCAGCGGCCCGGTCGGCAAGCTGGACATCTACCTGGTTGGCT TTCATCCGATGAAGGACGCACCAGATGAGCAAATGCAGGCCCATCACTATTGCCAGCAGGTCAACGAAGATCTTGCGCAA TGCGCGCTCTACGACGGCAACACCGACCGCGCCAACCTCACCGGTATCGAATACATCATCTCGGAGACGTCATTTGCGCA GTTGCCGGAACACGAGCGCAGCTTCTGGCATCCGCATAACGGGGAAATCCTTTCTGGCCAGCTTTCCGCCCCCAACCTGC CGCAGTTCGCCGAGAAGGAATTGATGCGCAGCAAGATCAATAGCTACGGCAAGACCTGGCACACCTGGCATTCGCGCAAG GGCACCACGCCCGGCGACACCTTGCCGCTGGGCGAGCCGATGCTGGCGTGGTCGTTCAATCGCGATGGGGAACTGCAGCA GCCGTTGGTTGCACAACGCGACCGGGCCGTCTCGGTGTCCACCGCAGAACGCCGCGCCAACCGTCAAGATCTTGTGCCGC TGGCAAAGCCACAAGAGGGCGTGGATGCATTGCATGCACATTTTCCAGATGCCCAACCCATTCCTGGCGTCACGGACGCA AGGGGCAACCACCCTTGA
Upstream 100 bases:
>100_bases CACTGCGTGACACGGCCCGCGCTCACGCCTGGCAGACCGCCCGCGATCTTAGCTTGAAGCACACTCATTGATGGGAAGCG CCATGCGACATTCCGCACTG
Downstream 100 bases:
>100_bases GCCCAGAAGAGGCCCTGCTGCACACGTGCAGCAGGCTCAGACGTGGTGCACGTGCTTGGCAATGCATTCAAGTCATGAAG AACTCGCGATGCAGCTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein; Embryo-Specific Protein
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MICVALCASCSRSPPSVTPPGAPESAKTNVLEAGAKVLQPSGPVGKLDIYLVGFHPMKDAPDEQMQAHHYCQQVNEDLAQ CALYDGNTDRANLTGIEYIISETSFAQLPEHERSFWHPHNGEILSGQLSAPNLPQFAEKELMRSKINSYGKTWHTWHSRK GTTPGDTLPLGEPMLAWSFNRDGELQQPLVAQRDRAVSVSTAERRANRQDLVPLAKPQEGVDALHAHFPDAQPIPGVTDA RGNHP
Sequences:
>Translated_245_residues MICVALCASCSRSPPSVTPPGAPESAKTNVLEAGAKVLQPSGPVGKLDIYLVGFHPMKDAPDEQMQAHHYCQQVNEDLAQ CALYDGNTDRANLTGIEYIISETSFAQLPEHERSFWHPHNGEILSGQLSAPNLPQFAEKELMRSKINSYGKTWHTWHSRK GTTPGDTLPLGEPMLAWSFNRDGELQQPLVAQRDRAVSVSTAERRANRQDLVPLAKPQEGVDALHAHFPDAQPIPGVTDA RGNHP >Mature_245_residues MICVALCASCSRSPPSVTPPGAPESAKTNVLEAGAKVLQPSGPVGKLDIYLVGFHPMKDAPDEQMQAHHYCQQVNEDLAQ CALYDGNTDRANLTGIEYIISETSFAQLPEHERSFWHPHNGEILSGQLSAPNLPQFAEKELMRSKINSYGKTWHTWHSRK GTTPGDTLPLGEPMLAWSFNRDGELQQPLVAQRDRAVSVSTAERRANRQDLVPLAKPQEGVDALHAHFPDAQPIPGVTDA RGNHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26839; Mature: 26839
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MICVALCASCSRSPPSVTPPGAPESAKTNVLEAGAKVLQPSGPVGKLDIYLVGFHPMKDA CHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC PDEQMQAHHYCQQVNEDLAQCALYDGNTDRANLTGIEYIISETSFAQLPEHERSFWHPHN CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHCCCHHHHCCCCCC GEILSGQLSAPNLPQFAEKELMRSKINSYGKTWHTWHSRKGTTPGDTLPLGEPMLAWSFN CCEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCEEEEECC RDGELQQPLVAQRDRAVSVSTAERRANRQDLVPLAKPQEGVDALHAHFPDAQPIPGVTDA CCCCCCCCHHHHCCCEEEEHHHHHHCCHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC RGNHP CCCCC >Mature Secondary Structure MICVALCASCSRSPPSVTPPGAPESAKTNVLEAGAKVLQPSGPVGKLDIYLVGFHPMKDA CHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC PDEQMQAHHYCQQVNEDLAQCALYDGNTDRANLTGIEYIISETSFAQLPEHERSFWHPHN CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHCCCHHHHCCCCCC GEILSGQLSAPNLPQFAEKELMRSKINSYGKTWHTWHSRKGTTPGDTLPLGEPMLAWSFN CCEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCEEEEECC RDGELQQPLVAQRDRAVSVSTAERRANRQDLVPLAKPQEGVDALHAHFPDAQPIPGVTDA CCCCCCCCHHHHCCCEEEEHHHHHHCCHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC RGNHP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA