Click here to switch to the map view.

The map label for this gene is rodZ [H]

Identifier: 21242762

GI number: 21242762

Start: 2360911

End: 2361771

Strand: Direct

Name: rodZ [H]

Synonym: XAC2018

Alternate gene names: 21242762

Gene position: 2360911-2361771 (Clockwise)

Preceding gene: 21242761

Following gene: 21242763

Centisome position: 45.62

GC content: 64.92

Gene sequence:

>861_bases
GTGATCAGTGATTCCAATCCGAACCTTTTCGAGCAGGAAAAGGGCTGCGGACAGCATTTGCGCGAAGCGCGCGAGGCGGC
AGGCCTGAGTGTGGACGAGGTGGCCGGCAAGTTGCGCATGCCGGCACACGTGGTGCACGCGTTGGAGCAGGAGGACTGGC
AGCGGCTGGGCGCGCCGGTGTTCGTACGCGGGCAGCTGCGCAGCTATGCGCGCTTGTTGCAGGTCGATCTGGAGCCGCTG
TTGCGGCAGGCCACGATTGCGCCGATCGAGCCGGTCAAGCTGGTGAGTCACACGCATACGCCGCGTGCGCGGCGCATTCT
CGAAAGCACCGCGCGCAAGGCCATGTATGTGGTCATTACCGGCGTGTTTGCGGTACCGGTCTGGTATGCGACGCGCTCGC
ATCTGGATGGCAAGGCGCCAAGCACGGTGTCCTTGGACAGCATGCCGGAGGCTGCAAAGTCCGCTGCGCCACGCAATCCA
GCAACGCAGGCCGCCGCAGCGCCGCGCGAACAGCCGGCGCCGTATATCGCATCGATGACCCCGGTGCCGCGTGCTACCGC
CGACGTCCAGGCGCCTGCGGAGGCAGTTGCTCCTGGCGGCAGTTTGTCGTTGAGTTTCAGCGGCGACAGCTGGGTGCAGA
TCCTGGCGCCGGATGGCAGTGCGGTCGAAAAAGCCCTGATACGTGCCGGTGAACAACGCACGTATTCGCCCGGTCAGGTG
GGGCGCATCGTGCTCGGCAATGCTTCGGCGGTACAGGTTCAGCAAGGCGGCAGTATCGTCGACGTGAAACCGTTCCAGCG
CGCTAACGTGGCCCGTTTTGCGGTATCCTCCGACGGCTCCGTGGTACCTGCTTCCGAGTGA

Upstream 100 bases:

>100_bases
AGCAAGGGCTAGGCGACAAGGTAGCTGCCGGCCGTTACCAACAGCGGTTGGTCAAGGAATTCCCTGACGCAGCGACCGCT
ACTCCCGGGGCCAATGCATT

Downstream 100 bases:

>100_bases
AGCGGACTGCGGTTTTTCATTTATCCCTTTTGATGTTCCGCGCCTCCGGGATGACGGAGCGAGAGTACGCATGGCGATCG
ACGATCTGCTGGACGAACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MISDSNPNLFEQEKGCGQHLREAREAAGLSVDEVAGKLRMPAHVVHALEQEDWQRLGAPVFVRGQLRSYARLLQVDLEPL
LRQATIAPIEPVKLVSHTHTPRARRILESTARKAMYVVITGVFAVPVWYATRSHLDGKAPSTVSLDSMPEAAKSAAPRNP
ATQAAAAPREQPAPYIASMTPVPRATADVQAPAEAVAPGGSLSLSFSGDSWVQILAPDGSAVEKALIRAGEQRTYSPGQV
GRIVLGNASAVQVQQGGSIVDVKPFQRANVARFAVSSDGSVVPASE

Sequences:

>Translated_286_residues
MISDSNPNLFEQEKGCGQHLREAREAAGLSVDEVAGKLRMPAHVVHALEQEDWQRLGAPVFVRGQLRSYARLLQVDLEPL
LRQATIAPIEPVKLVSHTHTPRARRILESTARKAMYVVITGVFAVPVWYATRSHLDGKAPSTVSLDSMPEAAKSAAPRNP
ATQAAAAPREQPAPYIASMTPVPRATADVQAPAEAVAPGGSLSLSFSGDSWVQILAPDGSAVEKALIRAGEQRTYSPGQV
GRIVLGNASAVQVQQGGSIVDVKPFQRANVARFAVSSDGSVVPASE
>Mature_286_residues
MISDSNPNLFEQEKGCGQHLREAREAAGLSVDEVAGKLRMPAHVVHALEQEDWQRLGAPVFVRGQLRSYARLLQVDLEPL
LRQATIAPIEPVKLVSHTHTPRARRILESTARKAMYVVITGVFAVPVWYATRSHLDGKAPSTVSLDSMPEAAKSAAPRNP
ATQAAAAPREQPAPYIASMTPVPRATADVQAPAEAVAPGGSLSLSFSGDSWVQILAPDGSAVEKALIRAGEQRTYSPGQV
GRIVLGNASAVQVQQGGSIVDVKPFQRANVARFAVSSDGSVVPASE

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 30389; Mature: 30389

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISDSNPNLFEQEKGCGQHLREAREAAGLSVDEVAGKLRMPAHVVHALEQEDWQRLGAPV
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCE
FVRGQLRSYARLLQVDLEPLLRQATIAPIEPVKLVSHTHTPRARRILESTARKAMYVVIT
EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHEEHHHHH
GVFAVPVWYATRSHLDGKAPSTVSLDSMPEAAKSAAPRNPATQAAAAPREQPAPYIASMT
HHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHCCCCCCCHHHHCCCCCCCCCCEECCC
PVPRATADVQAPAEAVAPGGSLSLSFSGDSWVQILAPDGSAVEKALIRAGEQRTYSPGQV
CCCCCCCCCCCCHHHHCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCC
GRIVLGNASAVQVQQGGSIVDVKPFQRANVARFAVSSDGSVVPASE
CEEEECCCCEEEEECCCCEEEECCCCCCCEEEEEECCCCCEECCCC
>Mature Secondary Structure
MISDSNPNLFEQEKGCGQHLREAREAAGLSVDEVAGKLRMPAHVVHALEQEDWQRLGAPV
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCE
FVRGQLRSYARLLQVDLEPLLRQATIAPIEPVKLVSHTHTPRARRILESTARKAMYVVIT
EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHEEHHHHH
GVFAVPVWYATRSHLDGKAPSTVSLDSMPEAAKSAAPRNPATQAAAAPREQPAPYIASMT
HHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHCCCCCCCHHHHCCCCCCCCCCEECCC
PVPRATADVQAPAEAVAPGGSLSLSFSGDSWVQILAPDGSAVEKALIRAGEQRTYSPGQV
CCCCCCCCCCCCHHHHCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCC
GRIVLGNASAVQVQQGGSIVDVKPFQRANVARFAVSSDGSVVPASE
CEEEECCCCEEEEECCCCEEEECCCCCCCEEEEEECCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA