| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is nreB [H]
Identifier: 21242737
GI number: 21242737
Start: 2324955
End: 2327087
Strand: Reverse
Name: nreB [H]
Synonym: XAC1994
Alternate gene names: 21242737
Gene position: 2327087-2324955 (Counterclockwise)
Preceding gene: 21242739
Following gene: 21242736
Centisome position: 44.96
GC content: 66.53
Gene sequence:
>2133_bases ATGGCCGCATCGCCAGCACTCAAGGTCGTCCGCGGATCCATGCAACAGCCCGTCGCCGCGCCCGCATTTTCGTCAGCCCC CGTCTCCTGTCTTCGTCTCGCCGAGCGCCTGCACCAAGGCCTGTGGACCCTGACCGGCCTGTATCTGCTGGTTGGCGTGA TCTGGCTGCTGCTGGGCAACCGGTTGCTCTACCTGGCCGGCGCCGCCATGCCGGAGCGCTGGTCTGATGCGAGCTTTCTG GTGCTGTCCAGCATCGTCATCCACCTGGTGCTGCGCCGCTTCACGGGCTTGATCGTGGACGAGTACGCCCAGCTGGCGCA GTCCGAGGCGTTGCTGCAAGCCAAGTTCATGGCACTGCCCAGCCCGGCCTTCATCTACGACCTGGCCACCATGCGCATCC TCGACGCCAATCCGGCGGCGCTGGAATTCTTCGGCTGGGAACGCGACGAGTTCCTGCAGCAGACGCTGCAGGCGATCTGG CCCAATGCCGATGGCGAGCGGCTGGAAGAGATCATTGCGCAGATCCGCAGCAAGGGAGATGCCACCTGCGTGTTGAACGA AGACCTGATGACGCGCAGCGGCACGCGGCATGTCGAGGTGCGGAGCAACCAGCTGCATCTGGCCAGCGGCCCTGCCCGCC TGGTCGTCACCGTTGACCGCAGCGAAGAGCGCCAGGCGCAAGATCTGCGCGACGAGGCACTCGAACGGCTGGAGGAGGCG CAGAGCATCGCGCGGCTGGGCTCCTGGCAACTGGATCGCACGACCGGCCTGGGCCGCTATTCGCCAGCGGTCTACCGCCT GCTGGGGCGCAGCGTACCGATGCATCGTCGCGAGCATCGGCTGGAAGAATTGCTGACCGCCTCCGACAGCGCGACCCAGG CGCGCATCGAACGCATGATCGAAGACATGTGTACCGGTGGCCAGGTGCAGATCGATGTGCTGCTGCCGCTGACCGGTGGC GATTCGCAACCGCGCACGGTGCATCTGCGCGCCGAAAGCGTGACCAGCCCCAGCGGCGTGCGCCATGTGCACGGCACCTT GCAGGATGTGAGCGAACGCGAGCAATCGCGCCGGCTGCTGCGCGAACGCGAGGAGCAGTTTCGCGAACTGGTGCGCGTGC TGCCCGACGGGGTGCTGATTCTCGCCGACGAGCATGTGATGTACGCCAACGCGGCCGGCTCGGCCCAGTTCGGCTTCCAG GGCGAAACCATCCTGGGCGAACCGCTGCAGACCCTGGTGGGCGACAACGACCTGCCGGTGGTGCGCGACTACCTGCGCGC AGGCAGCGATCGCAATGAGCCGGTCTCCAGCGCACGCGCGATGCGTCGTCGCGACGGCAGCACCTTCTACGCAGGTCTGT CGGCCGGCGACATCCGCTATGGCGGACGCAGCTGCAAGTTGCTGGTGGTGCGCGATCTGGGCGAACCCGAGCGCATGCGC GATGCCCTGGCCGAGAGCAATGTCGAGCTGCAGGCGATGGCCAAACGTCTGTTTTCGTTGCAGGAAGATGAGCGGCGCGC CATCTCGCGCGACCTGCATGACGACATTGGGCAAGCGATCACCGCGATGAAGTTGTCCGCGCATGCGGCCCTGGATGAGC CGGACGCGGACGCGCGCCGCGAGGACTTGCTGGAAGTGGTGTCGCTGGCCGATACCACGGTGACCAAGCTGCGCAATCTG TCGATGCTGTTGCGCCCGCCACAACTCGATGCCCTGGGCCTGGAGGCAGCGCTGCGCTGGCAGGCGTCGATGCTGTTCCG CGCCTCGCAAGTGCGGCTGGAGCTGGATATTCAGGCGCTCGACGAACGGCCGGGCAACGAGATCGAACAGGCCTGCTTCC GGATCGCGCAGGAAAGCCTGACCAACGCGTTGCGGCACGCCTGCGCCGGCGAAGTGCACCTGCGTCTGCATTCGATCGAC GGCGACAGTTTCCGCCTGGAAGTCAGCGATGACGGCGATGGCTTCGAGCCGGAGGGTCCGCGTGGGCTGGGGCTGATCGT GATGCGTGAGCGTGCGCAAACCGTCGGCGGCACGCTCGCGATAGAATCGGCTCCCGGAGCAGGCACGCGCGTGACGTTGC GCCTGCCCTATCACCCGGTCGGCGAGTCCGTCCACGACGATGGTGGACGTTGA
Upstream 100 bases:
>100_bases CGACCCCGGCCTTCGGGGTCGCAATGGATAACGGCAGTGCCGGCGAATAGTTGAGCCACCTGTTGCGAGCTGGACCGAAC CGGCCCGAGTTACGGCTAAG
Downstream 100 bases:
>100_bases GTCATGTGGAGCCCCGTAATCCCGCCCGGACTGGAAATCGTCAAGCCCACCCGGCTTGGCGCGGGCAGTCCCGAATTGCT GCACCTGGTGGATGCGGCCG
Product: HrpX-like protein
Products: NA
Alternate protein names: Nitrogen regulation protein B [H]
Number of amino acids: Translated: 710; Mature: 709
Protein sequence:
>710_residues MAASPALKVVRGSMQQPVAAPAFSSAPVSCLRLAERLHQGLWTLTGLYLLVGVIWLLLGNRLLYLAGAAMPERWSDASFL VLSSIVIHLVLRRFTGLIVDEYAQLAQSEALLQAKFMALPSPAFIYDLATMRILDANPAALEFFGWERDEFLQQTLQAIW PNADGERLEEIIAQIRSKGDATCVLNEDLMTRSGTRHVEVRSNQLHLASGPARLVVTVDRSEERQAQDLRDEALERLEEA QSIARLGSWQLDRTTGLGRYSPAVYRLLGRSVPMHRREHRLEELLTASDSATQARIERMIEDMCTGGQVQIDVLLPLTGG DSQPRTVHLRAESVTSPSGVRHVHGTLQDVSEREQSRRLLREREEQFRELVRVLPDGVLILADEHVMYANAAGSAQFGFQ GETILGEPLQTLVGDNDLPVVRDYLRAGSDRNEPVSSARAMRRRDGSTFYAGLSAGDIRYGGRSCKLLVVRDLGEPERMR DALAESNVELQAMAKRLFSLQEDERRAISRDLHDDIGQAITAMKLSAHAALDEPDADARREDLLEVVSLADTTVTKLRNL SMLLRPPQLDALGLEAALRWQASMLFRASQVRLELDIQALDERPGNEIEQACFRIAQESLTNALRHACAGEVHLRLHSID GDSFRLEVSDDGDGFEPEGPRGLGLIVMRERAQTVGGTLAIESAPGAGTRVTLRLPYHPVGESVHDDGGR
Sequences:
>Translated_710_residues MAASPALKVVRGSMQQPVAAPAFSSAPVSCLRLAERLHQGLWTLTGLYLLVGVIWLLLGNRLLYLAGAAMPERWSDASFL VLSSIVIHLVLRRFTGLIVDEYAQLAQSEALLQAKFMALPSPAFIYDLATMRILDANPAALEFFGWERDEFLQQTLQAIW PNADGERLEEIIAQIRSKGDATCVLNEDLMTRSGTRHVEVRSNQLHLASGPARLVVTVDRSEERQAQDLRDEALERLEEA QSIARLGSWQLDRTTGLGRYSPAVYRLLGRSVPMHRREHRLEELLTASDSATQARIERMIEDMCTGGQVQIDVLLPLTGG DSQPRTVHLRAESVTSPSGVRHVHGTLQDVSEREQSRRLLREREEQFRELVRVLPDGVLILADEHVMYANAAGSAQFGFQ GETILGEPLQTLVGDNDLPVVRDYLRAGSDRNEPVSSARAMRRRDGSTFYAGLSAGDIRYGGRSCKLLVVRDLGEPERMR DALAESNVELQAMAKRLFSLQEDERRAISRDLHDDIGQAITAMKLSAHAALDEPDADARREDLLEVVSLADTTVTKLRNL SMLLRPPQLDALGLEAALRWQASMLFRASQVRLELDIQALDERPGNEIEQACFRIAQESLTNALRHACAGEVHLRLHSID GDSFRLEVSDDGDGFEPEGPRGLGLIVMRERAQTVGGTLAIESAPGAGTRVTLRLPYHPVGESVHDDGGR >Mature_709_residues AASPALKVVRGSMQQPVAAPAFSSAPVSCLRLAERLHQGLWTLTGLYLLVGVIWLLLGNRLLYLAGAAMPERWSDASFLV LSSIVIHLVLRRFTGLIVDEYAQLAQSEALLQAKFMALPSPAFIYDLATMRILDANPAALEFFGWERDEFLQQTLQAIWP NADGERLEEIIAQIRSKGDATCVLNEDLMTRSGTRHVEVRSNQLHLASGPARLVVTVDRSEERQAQDLRDEALERLEEAQ SIARLGSWQLDRTTGLGRYSPAVYRLLGRSVPMHRREHRLEELLTASDSATQARIERMIEDMCTGGQVQIDVLLPLTGGD SQPRTVHLRAESVTSPSGVRHVHGTLQDVSEREQSRRLLREREEQFRELVRVLPDGVLILADEHVMYANAAGSAQFGFQG ETILGEPLQTLVGDNDLPVVRDYLRAGSDRNEPVSSARAMRRRDGSTFYAGLSAGDIRYGGRSCKLLVVRDLGEPERMRD ALAESNVELQAMAKRLFSLQEDERRAISRDLHDDIGQAITAMKLSAHAALDEPDADARREDLLEVVSLADTTVTKLRNLS MLLRPPQLDALGLEAALRWQASMLFRASQVRLELDIQALDERPGNEIEQACFRIAQESLTNALRHACAGEVHLRLHSIDG DSFRLEVSDDGDGFEPEGPRGLGLIVMRERAQTVGGTLAIESAPGAGTRVTLRLPYHPVGESVHDDGGR
Specific function: Member of the two-component regulatory system nreB/nreC involved in the control of dissimilatory nitrate/nitrite reduction in response to oxygen. NreB functions as a direct oxygen sensor histidine kinase which is autophosphorylated, in the absence of oxyg
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI87082311, Length=219, Percent_Identity=37.4429223744292, Blast_Score=84, Evalue=4e-17, Organism=Escherichia coli, GI1788812, Length=199, Percent_Identity=29.1457286432161, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1787474, Length=195, Percent_Identity=29.7435897435897, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR011712 - InterPro: IPR005467 - InterPro: IPR017203 [H]
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 78582; Mature: 78451
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS50112 PAS ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASPALKVVRGSMQQPVAAPAFSSAPVSCLRLAERLHQGLWTLTGLYLLVGVIWLLLGN CCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RLLYLAGAAMPERWSDASFLVLSSIVIHLVLRRFTGLIVDEYAQLAQSEALLQAKFMALP HHEEHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SPAFIYDLATMRILDANPAALEFFGWERDEFLQQTLQAIWPNADGERLEEIIAQIRSKGD CCHHHHHHHHHEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC ATCVLNEDLMTRSGTRHVEVRSNQLHLASGPARLVVTVDRSEERQAQDLRDEALERLEEA EEEEECCHHHHCCCCEEEEEECCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH QSIARLGSWQLDRTTGLGRYSPAVYRLLGRSVPMHRREHRLEELLTASDSATQARIERMI HHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH EDMCTGGQVQIDVLLPLTGGDSQPRTVHLRAESVTSPSGVRHVHGTLQDVSEREQSRRLL HHHCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH REREEQFRELVRVLPDGVLILADEHVMYANAAGSAQFGFQGETILGEPLQTLVGDNDLPV HHHHHHHHHHHHHCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCHH VRDYLRAGSDRNEPVSSARAMRRRDGSTFYAGLSAGDIRYGGRSCKLLVVRDLGEPERMR HHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCEEECCCCEEEEEEECCCCHHHHH DALAESNVELQAMAKRLFSLQEDERRAISRDLHDDIGQAITAMKLSAHAALDEPDADARR HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH EDLLEVVSLADTTVTKLRNLSMLLRPPQLDALGLEAALRWQASMLFRASQVRLELDIQAL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEHHHH DERPGNEIEQACFRIAQESLTNALRHACAGEVHLRLHSIDGDSFRLEVSDDGDGFEPEGP CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCC RGLGLIVMRERAQTVGGTLAIESAPGAGTRVTLRLPYHPVGESVHDDGGR CCCEEEEEEHHHHHCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure AASPALKVVRGSMQQPVAAPAFSSAPVSCLRLAERLHQGLWTLTGLYLLVGVIWLLLGN CCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RLLYLAGAAMPERWSDASFLVLSSIVIHLVLRRFTGLIVDEYAQLAQSEALLQAKFMALP HHEEHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SPAFIYDLATMRILDANPAALEFFGWERDEFLQQTLQAIWPNADGERLEEIIAQIRSKGD CCHHHHHHHHHEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC ATCVLNEDLMTRSGTRHVEVRSNQLHLASGPARLVVTVDRSEERQAQDLRDEALERLEEA EEEEECCHHHHCCCCEEEEEECCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH QSIARLGSWQLDRTTGLGRYSPAVYRLLGRSVPMHRREHRLEELLTASDSATQARIERMI HHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH EDMCTGGQVQIDVLLPLTGGDSQPRTVHLRAESVTSPSGVRHVHGTLQDVSEREQSRRLL HHHCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH REREEQFRELVRVLPDGVLILADEHVMYANAAGSAQFGFQGETILGEPLQTLVGDNDLPV HHHHHHHHHHHHHCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCHH VRDYLRAGSDRNEPVSSARAMRRRDGSTFYAGLSAGDIRYGGRSCKLLVVRDLGEPERMR HHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCEEECCCCEEEEEEECCCCHHHHH DALAESNVELQAMAKRLFSLQEDERRAISRDLHDDIGQAITAMKLSAHAALDEPDADARR HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH EDLLEVVSLADTTVTKLRNLSMLLRPPQLDALGLEAALRWQASMLFRASQVRLELDIQAL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEHHHH DERPGNEIEQACFRIAQESLTNALRHACAGEVHLRLHSIDGDSFRLEVSDDGDGFEPEGP CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCC RGLGLIVMRERAQTVGGTLAIESAPGAGTRVTLRLPYHPVGESVHDDGGR CCCEEEEEEHHHHHCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA