| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is flgM
Identifier: 21242733
GI number: 21242733
Start: 2321035
End: 2321346
Strand: Direct
Name: flgM
Synonym: XAC1989
Alternate gene names: NA
Gene position: 2321035-2321346 (Clockwise)
Preceding gene: 77748624
Following gene: 21242734
Centisome position: 44.85
GC content: 62.82
Gene sequence:
>312_bases ATGACCCAGAAAATCGAAGGCAATCTACCGACCGCTGCCACCCTTCGCACCACGGCCACCAGCAGCAAGATCGCTTCGGC CGGCGAAGATCGCGCGTCCCCGGTTGCCGCAACCCCGCCGACCGACAGCGTCAAGTTGACCGGCGAAGCCACCAACCTGC AGAACCTGCAGCGCGAGCTTTCGCAGTCCTCGGCGATCGACACCGGTCGCGTCCAGGCGGTGAAGGATGCATTGCAGAAC GGCAGCTATTCCATCAACCCGGACGCCATCGCCAGCCGCATGATGGATCTGAATCAGCAACTGGCGGGTTGA
Upstream 100 bases:
>100_bases TGAAGCGAGCGGAACCGTTGTGGTCTCCAGGTAAAAAATTTCTATAAAGTTTTTTTTCTGGGTGCCGTTATCCCCTACGA CCTGTAGAGGAGTTCCTGAC
Downstream 100 bases:
>100_bases TCCCCGACTGAAAGGATGAACGTGAACGAGTTCCTGCAACGTCTCAGCGATGCGCTGGCCGGCGAACGCCAGGCATTACT CGAGAACGACATCGACGGGC
Product: flagellar protein
Products: NA
Alternate protein names: Flagellar Protein
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MTQKIEGNLPTAATLRTTATSSKIASAGEDRASPVAATPPTDSVKLTGEATNLQNLQRELSQSSAIDTGRVQAVKDALQN GSYSINPDAIASRMMDLNQQLAG
Sequences:
>Translated_103_residues MTQKIEGNLPTAATLRTTATSSKIASAGEDRASPVAATPPTDSVKLTGEATNLQNLQRELSQSSAIDTGRVQAVKDALQN GSYSINPDAIASRMMDLNQQLAG >Mature_102_residues TQKIEGNLPTAATLRTTATSSKIASAGEDRASPVAATPPTDSVKLTGEATNLQNLQRELSQSSAIDTGRVQAVKDALQNG SYSINPDAIASRMMDLNQQLAG
Specific function: Unknown
COG id: COG2747
COG function: function code KNU; Negative regulator of flagellin synthesis (anti-sigma28 factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10730; Mature: 10599
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQKIEGNLPTAATLRTTATSSKIASAGEDRASPVAATPPTDSVKLTGEATNLQNLQREL CCCCCCCCCCCCCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHH SQSSAIDTGRVQAVKDALQNGSYSINPDAIASRMMDLNQQLAG HHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TQKIEGNLPTAATLRTTATSSKIASAGEDRASPVAATPPTDSVKLTGEATNLQNLQREL CCCCCCCCCCCCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHH SQSSAIDTGRVQAVKDALQNGSYSINPDAIASRMMDLNQQLAG HHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA