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The map label for this gene is flgF [H]

Identifier: 21242726

GI number: 21242726

Start: 2315021

End: 2315776

Strand: Reverse

Name: flgF [H]

Synonym: XAC1982

Alternate gene names: 21242726

Gene position: 2315776-2315021 (Counterclockwise)

Preceding gene: 21242727

Following gene: 21242725

Centisome position: 44.74

GC content: 64.15

Gene sequence:

>756_bases
ATGGATAAAGCCCTCTACGTCGCGATGACCGGTGCCCGCGCCTCCCTGCAGGCGCAAGGCACCGTCTCGCACAATCTCGC
CAACGTCGATACGGTGGGATTCAAGGCCGCGCTGGCCAACACCGAGGCGTTCAAGATCCAGGGCAAGGGCTATCCGTCGC
GGATCGATGCGCTGCATGTGGACCAGGGCTTCGATCGTAGCCAGGGCCATCAGAAGGTCACCGGCAACCCGTTGGACGTG
TCGCTGCAGCAGGACCGCTGGTTGGCGGTGCAGTCGCCCGACGGCAGCGAGGCCTACACCCGCAACGGCGAATTGGCGCT
TACCGCCAATGGCCAACTGGTTACCGCCAACGGGCATGCGGTGCTGGACGAAGGCGGCAACCCGATGACGATCCCGCCGC
ACCAGGCGATGGAGATCGGCAGCGACGGCAGTATTTCGATCATTCCGCAGGGCGAAGGCCCGCAGACCATGGCCATCGTC
GGCAAGATGAAGGTGGTGGATGCGCCCGCCGACCGTTTGACGCGGCGCCCCGACGGGCTGATGCGCAACACCAGCACCGA
CCCGGCGCAGGCATTTGCGGTAGCCACCGGCAAGACCATCAACAGCGGCATGCTGGAAGGCAGCAACGTGGACGCGGCCG
GCGCACTGGTGGAAATGATCCAGCTGCAACGGCAGTTCGAAATGCAGGTCAAGATCATCAAGAACGGCGACGACAACGCG
CAATCGGCCAATTCGCTGTTGCGGGTGAGCGGCTAA

Upstream 100 bases:

>100_bases
GGCGTCGCGCGTCACCGATGCCGGTCTTCCCCTACCCTCCCAGCCCCCGCAATCCCGCTTTTGCGATTCCCGATTCTCCA
TTCCCGATTCCCGGTGTCCC

Downstream 100 bases:

>100_bases
GCGCAGCTCATGCGGGCTGCGCCTTCGTGCCAGCCAGCGCTGTTGGCAATCGAAAGCCAGCTTGGCAGGTTTTCTGCAGA
GCGAATGATCTGGGCTTACG

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MDKALYVAMTGARASLQAQGTVSHNLANVDTVGFKAALANTEAFKIQGKGYPSRIDALHVDQGFDRSQGHQKVTGNPLDV
SLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANGHAVLDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIV
GKMKVVDAPADRLTRRPDGLMRNTSTDPAQAFAVATGKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNA
QSANSLLRVSG

Sequences:

>Translated_251_residues
MDKALYVAMTGARASLQAQGTVSHNLANVDTVGFKAALANTEAFKIQGKGYPSRIDALHVDQGFDRSQGHQKVTGNPLDV
SLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANGHAVLDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIV
GKMKVVDAPADRLTRRPDGLMRNTSTDPAQAFAVATGKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNA
QSANSLLRVSG
>Mature_251_residues
MDKALYVAMTGARASLQAQGTVSHNLANVDTVGFKAALANTEAFKIQGKGYPSRIDALHVDQGFDRSQGHQKVTGNPLDV
SLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANGHAVLDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIV
GKMKVVDAPADRLTRRPDGLMRNTSTDPAQAFAVATGKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNA
QSANSLLRVSG

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=253, Percent_Identity=41.897233201581, Blast_Score=178, Evalue=3e-46,
Organism=Escherichia coli, GI1787318, Length=266, Percent_Identity=31.203007518797, Blast_Score=88, Evalue=5e-19,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 26464; Mature: 26464

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKALYVAMTGARASLQAQGTVSHNLANVDTVGFKAALANTEAFKIQGKGYPSRIDALHV
CCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCEEEEEC
DQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANGHA
CCCCCCCCCCCEECCCCEEEEECCCCEEEEECCCCCCCEECCCCEEEEECCEEEEECCCE
VLDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPDGL
EEECCCCCCEECCHHHHCCCCCCCEEEEECCCCCCEEEEEEEEEEEECCHHHHHCCCCCC
MRNTSTDPAQAFAVATGKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNA
CCCCCCCHHHEEEEECCCCCCCCEECCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCC
QSANSLLRVSG
HHHCCEEEECC
>Mature Secondary Structure
MDKALYVAMTGARASLQAQGTVSHNLANVDTVGFKAALANTEAFKIQGKGYPSRIDALHV
CCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCEEEEEC
DQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANGHA
CCCCCCCCCCCEECCCCEEEEECCCCEEEEECCCCCCCEECCCCEEEEECCEEEEECCCE
VLDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPDGL
EEECCCCCCEECCHHHHCCCCCCCEEEEECCCCCCEEEEEEEEEEEECCHHHHHCCCCCC
MRNTSTDPAQAFAVATGKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNA
CCCCCCCHHHEEEEECCCCCCCCEECCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCC
QSANSLLRVSG
HHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]